RNA–Protein interactions for RNA: ENST00000526346.5

NUP214-216, Transcript of nucleoporin 214, humanhuman

TSL 4

Gene NUP214, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP214-216ENST00000526346 NISCHQ9Y2I1 1504 aa18.16■□□□□ 0.5
NUP214-216ENST00000526346 ABCC9O60706 1549 aa17.73■□□□□ 0.43
NUP214-216ENST00000526346 DNAJC5BQ9UF47 199 aa17.57■□□□□ 0.4
NUP214-216ENST00000526346 CCDC180Q9P1Z9 1646 aa16.63■□□□□ 0.25
NUP214-216ENST00000526346 DNAJC5Q9H3Z4 198 aa16.61■□□□□ 0.25
NUP214-216ENST00000526346 PABPN1Q86U42 306 aaKnown RBP eCLIP16.41■□□□□ 0.22
NUP214-216ENST00000526346 RB1CC1Q8TDY2 1594 aa16.28■□□□□ 0.2
NUP214-216ENST00000526346 UNC13AQ9UPW8 1703 aa16.13■□□□□ 0.17
NUP214-216ENST00000526346 BICRAQ9NZM4 1560 aa16■□□□□ 0.15
NUP214-216ENST00000526346 CECR2Q9BXF3 1484 aa15.98■□□□□ 0.15
NUP214-216ENST00000526346 CC2D2AQ9P2K1 1620 aa15.92■□□□□ 0.14
NUP214-216ENST00000526346 NACADO15069 1562 aa15.91■□□□□ 0.14
NUP214-216ENST00000526346 DCAF8L2P0C7V8 631 aa15.85■□□□□ 0.13
NUP214-216ENST00000526346 TRIM41Q8WV44 630 aa15.62■□□□□ 0.09
NUP214-216ENST00000526346 EIF4G1Q04637 1599 aaKnown RBP15.62■□□□□ 0.09
NUP214-216ENST00000526346 CUX2O14529 1486 aa15.45■□□□□ 0.06
NUP214-216ENST00000526346 SHROOM4Q9ULL8 1493 aa15.35■□□□□ 0.05
NUP214-216ENST00000526346 SCRIBQ14160 1630 aa15.28■□□□□ 0.04
NUP214-216ENST00000526346 MYO15BQ96JP2 1530 aa15.28■□□□□ 0.04
NUP214-216ENST00000526346 ERCC6Q03468 1493 aa15.26■□□□□ 0.03
NUP214-216ENST00000526346 NESP48681 1621 aa15.02□□□□□ -0.01
NUP214-216ENST00000526346 THOC2Q8NI27 1593 aaKnown RBP14.95□□□□□ -0.02
NUP214-216ENST00000526346 ZCCHC6Q5VYS8 1495 aaKnown RBP14.84□□□□□ -0.03
NUP214-216ENST00000526346 SMARCA2P51531 1590 aa14.83□□□□□ -0.04
NUP214-216ENST00000526346 DCAF1Q9Y4B6 1507 aa14.8□□□□□ -0.04
NUP214-216ENST00000526346 AEBP2Q6ZN18 517 aaPredicted RBP14.78□□□□□ -0.04
NUP214-216ENST00000526346 KIF21AQ7Z4S6 1674 aa14.76□□□□□ -0.05
NUP214-216ENST00000526346 NCAPD3P42695 1498 aa14.73□□□□□ -0.05
NUP214-216ENST00000526346 BAZ1AQ9NRL2 1556 aaPredicted RBP14.73□□□□□ -0.05
NUP214-216ENST00000526346 RIMBP3CA6NJZ7 1639 aa14.68□□□□□ -0.06
NUP214-216ENST00000526346 RIMBP3BA6NNM3 1639 aa14.68□□□□□ -0.06
NUP214-216ENST00000526346 RIMBP3Q9UFD9 1639 aa14.68□□□□□ -0.06
NUP214-216ENST00000526346 OSCARQ8IYS5 282 aa14.63□□□□□ -0.07
NUP214-216ENST00000526346 ATAD2BQ9ULI0 1458 aa14.63□□□□□ -0.07
NUP214-216ENST00000526346 TRHP20396 242 aaPredicted RBP14.6□□□□□ -0.07
NUP214-216ENST00000526346 LAMC3Q9Y6N6 1575 aa14.53□□□□□ -0.08
NUP214-216ENST00000526346 HMGXB3Q12766 1538 aa14.51□□□□□ -0.09
NUP214-216ENST00000526346 ARHGEF11O15085 1522 aa14.49□□□□□ -0.09
NUP214-216ENST00000526346 CYB5RLQ6IPT4 315 aa14.48□□□□□ -0.09
NUP214-216ENST00000526346 WDR62O43379 1518 aa14.46□□□□□ -0.09
NUP214-216ENST00000526346 MRC2Q9UBG0 1479 aa14.46□□□□□ -0.09
NUP214-216ENST00000526346 ILDR1Q86SU0 546 aaPredicted RBP14.46□□□□□ -0.09
NUP214-216ENST00000526346 PDS5BQ9NTI5 1447 aa14.45□□□□□ -0.1
NUP214-216ENST00000526346 BAZ1BQ9UIG0 1483 aaKnown RBP14.41□□□□□ -0.1
NUP214-216ENST00000526346 SMARCA4P51532 1647 aa14.39□□□□□ -0.11
NUP214-216ENST00000526346 ARAP1Q96P48 1450 aa14.32□□□□□ -0.12
NUP214-216ENST00000526346 CADPSQ9ULU8 1353 aa14.25□□□□□ -0.13
NUP214-216ENST00000526346 CEP164Q9UPV0 1460 aa14.21□□□□□ -0.13
NUP214-216ENST00000526346 ZNF608Q9ULD9 1512 aaPredicted RBP14.19□□□□□ -0.14
NUP214-216ENST00000526346 PEG3Q9GZU2 1588 aa14.17□□□□□ -0.14
NUP214-216ENST00000526346 URB2Q14146 1524 aaKnown RBP14.16□□□□□ -0.14
NUP214-216ENST00000526346 FANCD2Q9BXW9 1451 aa14.15□□□□□ -0.14
NUP214-216ENST00000526346 CHD1O14646 1710 aa14.12□□□□□ -0.15
NUP214-216ENST00000526346 MROH2BQ7Z745 1585 aa14.09□□□□□ -0.15
NUP214-216ENST00000526346 EIF4G3O43432 1585 aaKnown RBP13.99□□□□□ -0.17
NUP214-216ENST00000526346 FBLN2P98095 1184 aa13.98□□□□□ -0.17
NUP214-216ENST00000526346 RSF1Q96T23 1441 aaPredicted RBP13.98□□□□□ -0.17
NUP214-216ENST00000526346 KDM4FA0A1W2PPD8 638 aa13.93□□□□□ -0.18
NUP214-216ENST00000526346 IFT140Q96RY7 1462 aa13.93□□□□□ -0.18
NUP214-216ENST00000526346 AQRO60306 1485 aaKnown RBP eCLIP13.91□□□□□ -0.186e-10■■■■■ 33.9
NUP214-216ENST00000526346 CFTRP13569 1480 aa13.91□□□□□ -0.18
NUP214-216ENST00000526346 WIZO95785 1651 aa13.91□□□□□ -0.18
NUP214-216ENST00000526346 CLASP1Q7Z460 1538 aa13.85□□□□□ -0.19
NUP214-216ENST00000526346 KIF13AQ9H1H9 1805 aa13.8□□□□□ -0.2
NUP214-216ENST00000526346 TOPBP1Q92547 1522 aa13.8□□□□□ -0.2
NUP214-216ENST00000526346 GAPVD1Q14C86 1478 aa13.77□□□□□ -0.21
NUP214-216ENST00000526346 TARBP1Q13395 1621 aaKnown RBP13.76□□□□□ -0.21
NUP214-216ENST00000526346 ERCC6L2Q5T890 1561 aa13.73□□□□□ -0.21
NUP214-216ENST00000526346 PRDM2Q13029 1718 aa13.73□□□□□ -0.21
NUP214-216ENST00000526346 SNAPC4Q5SXM2 1469 aa13.69□□□□□ -0.22
NUP214-216ENST00000526346 HECW2Q9P2P5 1572 aa13.68□□□□□ -0.22
NUP214-216ENST00000526346 TDRD9Q8NDG6 1382 aaKnown RBP13.68□□□□□ -0.22
NUP214-216ENST00000526346 SYNJ1O43426 1573 aa13.67□□□□□ -0.22
NUP214-216ENST00000526346 RAD54L2Q9Y4B4 1467 aa13.66□□□□□ -0.22
NUP214-216ENST00000526346 CHMP7Q8WUX9 453 aaPredicted RBP13.63□□□□□ -0.23
NUP214-216ENST00000526346 DNMBPQ6XZF7 1577 aa13.62□□□□□ -0.23
NUP214-216ENST00000526346 FBXO41Q8TF61 875 aa13.61□□□□□ -0.23
NUP214-216ENST00000526346 POLA1P09884 1462 aaPredicted RBP13.6□□□□□ -0.23
NUP214-216ENST00000526346 LMTK3Q96Q04 1460 aa13.6□□□□□ -0.23
NUP214-216ENST00000526346 ILDR2Q71H61 639 aa13.59□□□□□ -0.23
NUP214-216ENST00000526346 KDM6BO15054 1643 aa13.57□□□□□ -0.24
NUP214-216ENST00000526346 TSPOAP1O95153 1857 aa13.55□□□□□ -0.24
NUP214-216ENST00000526346 ADGRL1O94910 1474 aa13.55□□□□□ -0.24
NUP214-216ENST00000526346 FAM69CQ0P6D2 419 aa13.54□□□□□ -0.24
NUP214-216ENST00000526346 TOP2AP11388 1531 aaKnown RBP13.53□□□□□ -0.24
NUP214-216ENST00000526346 ABCC8Q09428 1581 aa13.5□□□□□ -0.25
NUP214-216ENST00000526346 SYNJ2O15056 1496 aa13.5□□□□□ -0.25
NUP214-216ENST00000526346 MAGI1Q96QZ7 1491 aaPredicted RBP13.49□□□□□ -0.25
NUP214-216ENST00000526346 SOGA1O94964 1423 aa13.48□□□□□ -0.25
NUP214-216ENST00000526346 SOCS7O14512 581 aa13.48□□□□□ -0.25
NUP214-216ENST00000526346 CEP170Q5SW79 1584 aa13.46□□□□□ -0.25
NUP214-216ENST00000526346 DIP2BQ9P265 1576 aa13.46□□□□□ -0.25
NUP214-216ENST00000526346 ABCC10Q5T3U5 1492 aa13.46□□□□□ -0.25
NUP214-216ENST00000526346 CCDC88BA6NC98 1476 aa13.44□□□□□ -0.26
NUP214-216ENST00000526346 GRIN2BQ13224 1484 aa13.43□□□□□ -0.26
NUP214-216ENST00000526346 PBRM1Q86U86 1689 aa13.42□□□□□ -0.26
NUP214-216ENST00000526346 FGD5Q6ZNL6 1462 aa13.4□□□□□ -0.26
NUP214-216ENST00000526346 DISP3Q9P2K9 1392 aa13.35□□□□□ -0.27
NUP214-216ENST00000526346 SHROOM2Q13796 1616 aa13.35□□□□□ -0.27
NUP214-216ENST00000526346 WDR97A6NE52 1622 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms