RNA–Protein interactions for RNA: ENST00000588012.5

PTPRS-205, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRS, Length 5,993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-205ENST00000588012 DCAF8L2P0C7V8 631 aa28.01■■■□□ 2.08
PTPRS-205ENST00000588012 NISCHQ9Y2I1 1504 aa26.47■■□□□ 1.83
PTPRS-205ENST00000588012 SUPT5HO00267 1087 aaKnown RBP26.28■■□□□ 1.8
PTPRS-205ENST00000588012 SHROOM4Q9ULL8 1493 aa25.88■■□□□ 1.73
PTPRS-205ENST00000588012 EHMT2Q96KQ7 1210 aa25.52■■□□□ 1.68
PTPRS-205ENST00000588012 APLP2Q06481 763 aa25.24■■□□□ 1.63
PTPRS-205ENST00000588012 FAM9AQ8IZU1 332 aaPredicted RBP25.11■■□□□ 1.61
PTPRS-205ENST00000588012 PELP1Q8IZL8 1130 aaKnown RBP24.85■■□□□ 1.57
PTPRS-205ENST00000588012 TTBK1Q5TCY1 1321 aaPredicted RBP24.63■■□□□ 1.53
PTPRS-205ENST00000588012 RANGAP1P46060 587 aaPredicted RBP24.54■■□□□ 1.52
PTPRS-205ENST00000588012 ATP1B4Q9UN42 357 aaPredicted RBP24.43■■□□□ 1.5
PTPRS-205ENST00000588012 TRIM41Q8WV44 630 aa24.41■■□□□ 1.5
PTPRS-205ENST00000588012 PCGF6Q9BYE7 350 aa24.28■■□□□ 1.48
PTPRS-205ENST00000588012 UBTFP17480 764 aaKnown RBP24.21■■□□□ 1.47
PTPRS-205ENST00000588012 CCER1Q8TC90 406 aaPredicted RBP24.06■■□□□ 1.44
PTPRS-205ENST00000588012 ZEB1P37275 1124 aaPredicted RBP24.01■■□□□ 1.43
PTPRS-205ENST00000588012 CENPBP07199 599 aaPredicted RBP23.88■■□□□ 1.41
PTPRS-205ENST00000588012 ERICH6Q7L0X2 663 aa23.8■■□□□ 1.4
PTPRS-205ENST00000588012 MYT1LQ9UL68 1186 aa23.68■■□□□ 1.38
PTPRS-205ENST00000588012 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.64■■□□□ 1.37
PTPRS-205ENST00000588012 HNRNPUL2Q1KMD3 747 aaKnown RBP23.64■■□□□ 1.37
PTPRS-205ENST00000588012 NEFLP07196 543 aa23.57■■□□□ 1.36
PTPRS-205ENST00000588012 PPARGC1BQ86YN6 1023 aaKnown RBP23.56■■□□□ 1.36
PTPRS-205ENST00000588012 YTHDC1Q96MU7 727 aaKnown RBP23.42■■□□□ 1.34
PTPRS-205ENST00000588012 ITGAEP38570 1179 aa23.42■■□□□ 1.34
PTPRS-205ENST00000588012 TRIM26Q12899 539 aaPredicted RBP23.31■■□□□ 1.32
PTPRS-205ENST00000588012 POLR3GLQ9BT43 218 aa23.29■■□□□ 1.32
PTPRS-205ENST00000588012 ABCC9O60706 1549 aa23.16■■□□□ 1.3
PTPRS-205ENST00000588012 CHIC1Q5VXU3 224 aa23.16■■□□□ 1.3
PTPRS-205ENST00000588012 PABPN1Q86U42 306 aaKnown RBP eCLIP23.1■■□□□ 1.299e-7■■□□□ 12.3
PTPRS-205ENST00000588012 LOC105371045A0A1W2PR82 267 aa23.06■■□□□ 1.28
PTPRS-205ENST00000588012 SLC4A1APQ9BWU0 796 aaKnown RBP23.01■■□□□ 1.27
PTPRS-205ENST00000588012 CNGB1Q14028 1251 aaPredicted RBP22.96■■□□□ 1.27
PTPRS-205ENST00000588012 DAXXQ9UER7 740 aaPredicted RBP22.95■■□□□ 1.26
PTPRS-205ENST00000588012 FAM50AQ14320 339 aaKnown RBP22.88■■□□□ 1.25
PTPRS-205ENST00000588012 HRCP23327 699 aa22.84■■□□□ 1.25
PTPRS-205ENST00000588012 TRIM52Q96A61 297 aa22.8■■□□□ 1.24
PTPRS-205ENST00000588012 FBLN2P98095 1184 aa22.75■■□□□ 1.23
PTPRS-205ENST00000588012 NEUROD1Q13562 356 aa22.57■■□□□ 1.2
PTPRS-205ENST00000588012 CLSPNQ9HAW4 1339 aa22.52■■□□□ 1.2
PTPRS-205ENST00000588012 ZNF326Q5BKZ1 582 aaKnown RBP22.49■■□□□ 1.19
PTPRS-205ENST00000588012 MYT1Q01538 1121 aa22.48■■□□□ 1.19
PTPRS-205ENST00000588012 DIEXFQ68CQ4 756 aaKnown RBP22.43■■□□□ 1.18
PTPRS-205ENST00000588012 ZNF316A6NFI3 1004 aaPredicted RBP22.41■■□□□ 1.18
PTPRS-205ENST00000588012 BCANQ96GW7 911 aa22.38■■□□□ 1.17
PTPRS-205ENST00000588012 ARID3CA6NKF2 412 aa22.35■■□□□ 1.17
PTPRS-205ENST00000588012 P3H3Q8IVL6 736 aa22.35■■□□□ 1.17
PTPRS-205ENST00000588012 ANP32CO43423 234 aa22.28■■□□□ 1.16
PTPRS-205ENST00000588012 ZBTB47Q9UFB7 747 aaPredicted RBP22.26■■□□□ 1.15
PTPRS-205ENST00000588012 ZNF777Q9ULD5 760 aaPredicted RBP22.26■■□□□ 1.15
PTPRS-205ENST00000588012 CDK11AQ9UQ88 783 aaPredicted RBP22.24■■□□□ 1.15
PTPRS-205ENST00000588012 SLC24A1O60721 1099 aa22.23■■□□□ 1.15
PTPRS-205ENST00000588012 CSRNP3Q8WYN3 585 aa22.22■■□□□ 1.15
PTPRS-205ENST00000588012 RTL5Q5HYW3 569 aaPredicted RBP22.2■■□□□ 1.14
PTPRS-205ENST00000588012 NEFMP07197 916 aa22.2■■□□□ 1.14
PTPRS-205ENST00000588012 ESF1Q9H501 851 aaKnown RBP22.19■■□□□ 1.14
PTPRS-205ENST00000588012 SCRIBQ14160 1630 aa22.19■■□□□ 1.14
PTPRS-205ENST00000588012 CANXP27824 592 aaKnown RBP22.12■■□□□ 1.13
PTPRS-205ENST00000588012 NPM1P06748 294 aaKnown RBP eCLIP22.08■■□□□ 1.13
PTPRS-205ENST00000588012 STAG3Q9UJ98 1225 aa22.02■■□□□ 1.12
PTPRS-205ENST00000588012 CHGAP10645 457 aaKnown RBP21.97■■□□□ 1.11
PTPRS-205ENST00000588012 BCL11AQ9H165 835 aa21.97■■□□□ 1.11
PTPRS-205ENST00000588012 PLPPR3Q6T4P5 718 aa21.94■■□□□ 1.1
PTPRS-205ENST00000588012 ZCCHC6Q5VYS8 1495 aaKnown RBP21.84■■□□□ 1.09
PTPRS-205ENST00000588012 TONSLQ96HA7 1378 aa21.83■■□□□ 1.08
PTPRS-205ENST00000588012 CHMP7Q8WUX9 453 aaPredicted RBP21.76■■□□□ 1.07
PTPRS-205ENST00000588012 GTF3C3Q9Y5Q9 886 aa21.76■■□□□ 1.07
PTPRS-205ENST00000588012 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.75■■□□□ 1.071e-6■□□□□ 9.8
PTPRS-205ENST00000588012 CCDC180Q9P1Z9 1646 aa21.71■■□□□ 1.07
PTPRS-205ENST00000588012 CHIC2Q9UKJ5 165 aa21.7■■□□□ 1.06
PTPRS-205ENST00000588012 TSPY4P0CV99 314 aa21.67■■□□□ 1.06
PTPRS-205ENST00000588012 TSPY10P0CW01 314 aa21.67■■□□□ 1.06
PTPRS-205ENST00000588012 RB1CC1Q8TDY2 1594 aa21.65■■□□□ 1.06
PTPRS-205ENST00000588012 MTUS2Q5JR59 1369 aa21.62■■□□□ 1.05
PTPRS-205ENST00000588012 ANP32AP39687 249 aaKnown RBP21.58■■□□□ 1.04
PTPRS-205ENST00000588012 SCAF1Q9H7N4 1312 aaKnown RBP21.52■■□□□ 1.03
PTPRS-205ENST00000588012 KDM2AQ9Y2K7 1162 aa21.51■■□□□ 1.03
PTPRS-205ENST00000588012 FAM9BQ8IZU0 186 aa21.51■■□□□ 1.03
PTPRS-205ENST00000588012 NPM2Q86SE8 214 aaKnown RBP21.5■■□□□ 1.03
PTPRS-205ENST00000588012 HNRNPUQ00839 825 aaKnown RBP eCLIP21.48■■□□□ 1.03
PTPRS-205ENST00000588012 DDX10Q13206 875 aaKnown RBP21.48■■□□□ 1.03
PTPRS-205ENST00000588012 WDR43Q15061 677 aaKnown RBP eCLIP21.47■■□□□ 1.03
PTPRS-205ENST00000588012 KCNH8Q96L42 1107 aa21.46■■□□□ 1.03
PTPRS-205ENST00000588012 TMC1Q8TDI8 760 aa21.45■■□□□ 1.03
PTPRS-205ENST00000588012 SALL2Q9Y467 1007 aaPredicted RBP21.44■■□□□ 1.02
PTPRS-205ENST00000588012 HSP90AA1P07900 732 aaKnown RBP21.43■■□□□ 1.02
PTPRS-205ENST00000588012 PPP1R15AO75807 674 aaPredicted RBP21.43■■□□□ 1.02
PTPRS-205ENST00000588012 UPF2Q9HAU5 1272 aaKnown RBP21.43■■□□□ 1.02
PTPRS-205ENST00000588012 CLIP1P30622 1438 aa21.43■■□□□ 1.02
PTPRS-205ENST00000588012 PLEKHD1A6NEE1 506 aa21.42■■□□□ 1.02
PTPRS-205ENST00000588012 DCAF1Q9Y4B6 1507 aa21.42■■□□□ 1.02
PTPRS-205ENST00000588012 ACIN1Q9UKV3 1341 aaKnown RBP21.41■■□□□ 1.02
PTPRS-205ENST00000588012 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.4■■□□□ 1.02
PTPRS-205ENST00000588012 RSF1Q96T23 1441 aaPredicted RBP21.4■■□□□ 1.02
PTPRS-205ENST00000588012 FKBP8Q14318 412 aa21.38■■□□□ 1.01
PTPRS-205ENST00000588012 BAZ1BQ9UIG0 1483 aaKnown RBP21.35■■□□□ 1.01
PTPRS-205ENST00000588012 RRP7BPQ9NSQ0 103 aa21.35■■□□□ 1.01
PTPRS-205ENST00000588012 ZBTB7CA1YPR0 619 aa21.35■■□□□ 1.01
PTPRS-205ENST00000588012 A0A0G2JS52 829 aa21.35■■□□□ 1.01
PTPRS-205ENST00000588012 C14orf37Q86TY3 774 aa21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms