RNA–Protein interactions for RNA: ENST00000359062.3

PDE3A-201, Transcript of phosphodiesterase 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE3A, Length 7,576 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE3A-201ENST00000359062 DCAF8L2P0C7V8 631 aa26.61■■□□□ 1.85
PDE3A-201ENST00000359062 SUPT5HO00267 1087 aaKnown RBP25.21■■□□□ 1.63
PDE3A-201ENST00000359062 EHMT2Q96KQ7 1210 aa24.98■■□□□ 1.59
PDE3A-201ENST00000359062 PELP1Q8IZL8 1130 aaKnown RBP24.83■■□□□ 1.56
PDE3A-201ENST00000359062 SHROOM4Q9ULL8 1493 aa24.69■■□□□ 1.54
PDE3A-201ENST00000359062 APLP2Q06481 763 aa24.29■■□□□ 1.48
PDE3A-201ENST00000359062 TTBK1Q5TCY1 1321 aaPredicted RBP24.15■■□□□ 1.46
PDE3A-201ENST00000359062 NISCHQ9Y2I1 1504 aa24.06■■□□□ 1.44
PDE3A-201ENST00000359062 ERICH6Q7L0X2 663 aa24.04■■□□□ 1.44
PDE3A-201ENST00000359062 FAM9AQ8IZU1 332 aaPredicted RBP23.94■■□□□ 1.42
PDE3A-201ENST00000359062 PCGF6Q9BYE7 350 aa23.84■■□□□ 1.41
PDE3A-201ENST00000359062 RANGAP1P46060 587 aaPredicted RBP23.76■■□□□ 1.39
PDE3A-201ENST00000359062 CCER1Q8TC90 406 aaPredicted RBP23.73■■□□□ 1.39
PDE3A-201ENST00000359062 CENPBP07199 599 aaPredicted RBP23.67■■□□□ 1.38
PDE3A-201ENST00000359062 ATP1B4Q9UN42 357 aaPredicted RBP23.6■■□□□ 1.37
PDE3A-201ENST00000359062 YTHDC1Q96MU7 727 aaKnown RBP23.37■■□□□ 1.33
PDE3A-201ENST00000359062 ZEB1P37275 1124 aaPredicted RBP23.37■■□□□ 1.33
PDE3A-201ENST00000359062 NEFLP07196 543 aa23.33■■□□□ 1.33
PDE3A-201ENST00000359062 TRIM41Q8WV44 630 aa23.23■■□□□ 1.31
PDE3A-201ENST00000359062 UBTFP17480 764 aaKnown RBP23.17■■□□□ 1.3
PDE3A-201ENST00000359062 MYT1Q01538 1121 aa23.08■■□□□ 1.29
PDE3A-201ENST00000359062 PPARGC1BQ86YN6 1023 aaKnown RBP23.01■■□□□ 1.27
PDE3A-201ENST00000359062 DAXXQ9UER7 740 aaPredicted RBP22.91■■□□□ 1.26
PDE3A-201ENST00000359062 POLR3GLQ9BT43 218 aa22.83■■□□□ 1.25
PDE3A-201ENST00000359062 MYT1LQ9UL68 1186 aa22.74■■□□□ 1.23
PDE3A-201ENST00000359062 ITGAEP38570 1179 aa22.69■■□□□ 1.22
PDE3A-201ENST00000359062 CNGB1Q14028 1251 aaPredicted RBP22.68■■□□□ 1.22
PDE3A-201ENST00000359062 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.56■■□□□ 1.2
PDE3A-201ENST00000359062 HNRNPUL2Q1KMD3 747 aaKnown RBP22.56■■□□□ 1.2
PDE3A-201ENST00000359062 TRIM26Q12899 539 aaPredicted RBP22.55■■□□□ 1.2
PDE3A-201ENST00000359062 CHIC1Q5VXU3 224 aa22.54■■□□□ 1.2
PDE3A-201ENST00000359062 SLC4A1APQ9BWU0 796 aaKnown RBP22.48■■□□□ 1.19
PDE3A-201ENST00000359062 HRCP23327 699 aa22.41■■□□□ 1.18
PDE3A-201ENST00000359062 ZNF316A6NFI3 1004 aaPredicted RBP22.37■■□□□ 1.17
PDE3A-201ENST00000359062 CLSPNQ9HAW4 1339 aa22.31■■□□□ 1.16
PDE3A-201ENST00000359062 RTL5Q5HYW3 569 aaPredicted RBP22.26■■□□□ 1.15
PDE3A-201ENST00000359062 LOC105371045A0A1W2PR82 267 aa22.21■■□□□ 1.15
PDE3A-201ENST00000359062 DIEXFQ68CQ4 756 aaKnown RBP22.05■■□□□ 1.12
PDE3A-201ENST00000359062 FAM50AQ14320 339 aaKnown RBP21.98■■□□□ 1.11
PDE3A-201ENST00000359062 BCANQ96GW7 911 aa21.94■■□□□ 1.1
PDE3A-201ENST00000359062 NEUROD1Q13562 356 aa21.91■■□□□ 1.1
PDE3A-201ENST00000359062 TRIM52Q96A61 297 aa21.9■■□□□ 1.1
PDE3A-201ENST00000359062 BCL11AQ9H165 835 aa21.87■■□□□ 1.09
PDE3A-201ENST00000359062 SLC24A1O60721 1099 aa21.82■■□□□ 1.08
PDE3A-201ENST00000359062 ZBTB47Q9UFB7 747 aaPredicted RBP21.81■■□□□ 1.08
PDE3A-201ENST00000359062 ZNF326Q5BKZ1 582 aaKnown RBP21.76■■□□□ 1.07
PDE3A-201ENST00000359062 CDK11AQ9UQ88 783 aaPredicted RBP21.75■■□□□ 1.07
PDE3A-201ENST00000359062 GTF3C3Q9Y5Q9 886 aa21.7■■□□□ 1.06
PDE3A-201ENST00000359062 ANP32CO43423 234 aa21.7■■□□□ 1.06
PDE3A-201ENST00000359062 CANXP27824 592 aaKnown RBP21.67■■□□□ 1.06
PDE3A-201ENST00000359062 NPM2Q86SE8 214 aaKnown RBP21.45■■□□□ 1.02
PDE3A-201ENST00000359062 NEFMP07197 916 aa21.45■■□□□ 1.02
PDE3A-201ENST00000359062 ANP32AP39687 249 aaKnown RBP21.42■■□□□ 1.02
PDE3A-201ENST00000359062 FBLN2P98095 1184 aa21.42■■□□□ 1.02
PDE3A-201ENST00000359062 ARID3CA6NKF2 412 aa21.31■■□□□ 1
PDE3A-201ENST00000359062 PABPN1Q86U42 306 aaKnown RBP eCLIP21.31■■□□□ 15e-15■■■■□ 20.8
PDE3A-201ENST00000359062 EIF5BO60841 1220 aaKnown RBP21.28■■□□□ 1
PDE3A-201ENST00000359062 ANP32BQ92688 251 aaKnown RBP21.25■□□□□ 0.99
PDE3A-201ENST00000359062 HSP90AA1P07900 732 aaKnown RBP21.24■□□□□ 0.99
PDE3A-201ENST00000359062 P3H3Q8IVL6 736 aa21.24■□□□□ 0.99
PDE3A-201ENST00000359062 ZNF777Q9ULD5 760 aaPredicted RBP21.17■□□□□ 0.98
PDE3A-201ENST00000359062 ACIN1Q9UKV3 1341 aaKnown RBP21.15■□□□□ 0.98
PDE3A-201ENST00000359062 FKBP8Q14318 412 aa21.13■□□□□ 0.97
PDE3A-201ENST00000359062 ABCC9O60706 1549 aa21.11■□□□□ 0.97
PDE3A-201ENST00000359062 PLPPR3Q6T4P5 718 aa21.1■□□□□ 0.97
PDE3A-201ENST00000359062 UPF2Q9HAU5 1272 aaKnown RBP21.07■□□□□ 0.96
PDE3A-201ENST00000359062 SALL2Q9Y467 1007 aaPredicted RBP21.06■□□□□ 0.96
PDE3A-201ENST00000359062 ARXQ96QS3 562 aa21.05■□□□□ 0.96
PDE3A-201ENST00000359062 CHGAP10645 457 aaKnown RBP21.03■□□□□ 0.96
PDE3A-201ENST00000359062 NBR1Q14596 966 aa21.02■□□□□ 0.96
PDE3A-201ENST00000359062 FAM9BQ8IZU0 186 aa21.01■□□□□ 0.95
PDE3A-201ENST00000359062 STAG3Q9UJ98 1225 aa21■□□□□ 0.95
PDE3A-201ENST00000359062 ESF1Q9H501 851 aaKnown RBP20.99■□□□□ 0.95
PDE3A-201ENST00000359062 HNRNPUQ00839 825 aaKnown RBP eCLIP20.98■□□□□ 0.95
PDE3A-201ENST00000359062 TONSLQ96HA7 1378 aa20.92■□□□□ 0.94
PDE3A-201ENST00000359062 GLIPR1L2Q4G1C9 344 aa20.9■□□□□ 0.94
PDE3A-201ENST00000359062 DDX10Q13206 875 aaKnown RBP20.88■□□□□ 0.93
PDE3A-201ENST00000359062 CCDC136Q96JN2 1154 aa20.84■□□□□ 0.93
PDE3A-201ENST00000359062 TMC1Q8TDI8 760 aa20.81■□□□□ 0.92
PDE3A-201ENST00000359062 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.79■□□□□ 0.92
PDE3A-201ENST00000359062 SCAF1Q9H7N4 1312 aaKnown RBP20.79■□□□□ 0.92
PDE3A-201ENST00000359062 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.79■□□□□ 0.92
PDE3A-201ENST00000359062 WDR43Q15061 677 aaKnown RBP eCLIP20.77■□□□□ 0.923e-10■■■■■ 42.3
PDE3A-201ENST00000359062 CSRNP3Q8WYN3 585 aa20.74■□□□□ 0.91
PDE3A-201ENST00000359062 IRX6P78412 446 aaPredicted RBP20.74■□□□□ 0.91
PDE3A-201ENST00000359062 A0A0G2JS52 829 aa20.72■□□□□ 0.91
PDE3A-201ENST00000359062 KDM2AQ9Y2K7 1162 aa20.7■□□□□ 0.9
PDE3A-201ENST00000359062 CDK11BP21127 795 aaKnown RBP20.7■□□□□ 0.9
PDE3A-201ENST00000359062 CHIC2Q9UKJ5 165 aa20.7■□□□□ 0.9
PDE3A-201ENST00000359062 SENP3Q9H4L4 574 aaPredicted RBP20.66■□□□□ 0.9
PDE3A-201ENST00000359062 PLEKHG5O94827 1062 aa20.66■□□□□ 0.9
PDE3A-201ENST00000359062 MYH16Q9H6N6 1097 aa20.66■□□□□ 0.9
PDE3A-201ENST00000359062 ZBTB7CA1YPR0 619 aa20.64■□□□□ 0.89
PDE3A-201ENST00000359062 SCRIBQ14160 1630 aa20.62■□□□□ 0.89
PDE3A-201ENST00000359062 MRS2Q9HD23 443 aa20.62■□□□□ 0.89
PDE3A-201ENST00000359062 HIRIP3Q9BW71 556 aaPredicted RBP20.59■□□□□ 0.89
PDE3A-201ENST00000359062 NPM1P06748 294 aaKnown RBP eCLIP20.58■□□□□ 0.89
PDE3A-201ENST00000359062 TRIM44Q96DX7 344 aaPredicted RBP20.54■□□□□ 0.88
PDE3A-201ENST00000359062 TPRNQ4KMQ1 711 aa20.53■□□□□ 0.88
PDE3A-201ENST00000359062 C14orf37Q86TY3 774 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms