RNA–Protein interactions for RNA: ENST00000367537.7

SMG7-202, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMG7, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-202ENST00000367537 NISCHQ9Y2I1 1504 aa15.21■□□□□ 0.03
SMG7-202ENST00000367537 DCAF8L2P0C7V8 631 aa14.48□□□□□ -0.09
SMG7-202ENST00000367537 SHROOM4Q9ULL8 1493 aa14.3□□□□□ -0.12
SMG7-202ENST00000367537 SUPT5HO00267 1087 aaKnown RBP14.21□□□□□ -0.14
SMG7-202ENST00000367537 EHMT2Q96KQ7 1210 aa13.62□□□□□ -0.23
SMG7-202ENST00000367537 PCGF6Q9BYE7 350 aa13.44□□□□□ -0.26
SMG7-202ENST00000367537 FAM9AQ8IZU1 332 aaPredicted RBP13.33□□□□□ -0.28
SMG7-202ENST00000367537 LOC105371045A0A1W2PR82 267 aa13.31□□□□□ -0.28
SMG7-202ENST00000367537 CHIC1Q5VXU3 224 aa13.26□□□□□ -0.29
SMG7-202ENST00000367537 APLP2Q06481 763 aa13.23□□□□□ -0.29
SMG7-202ENST00000367537 PPARGC1BQ86YN6 1023 aaKnown RBP13.22□□□□□ -0.29
SMG7-202ENST00000367537 PELP1Q8IZL8 1130 aaKnown RBP13.11□□□□□ -0.31
SMG7-202ENST00000367537 TTBK1Q5TCY1 1321 aaPredicted RBP13.1□□□□□ -0.31
SMG7-202ENST00000367537 HRCP23327 699 aa12.99□□□□□ -0.33
SMG7-202ENST00000367537 TRIM41Q8WV44 630 aa12.94□□□□□ -0.34
SMG7-202ENST00000367537 MYO15BQ96JP2 1530 aa12.94□□□□□ -0.34
SMG7-202ENST00000367537 ZEB1P37275 1124 aaPredicted RBP12.91□□□□□ -0.34
SMG7-202ENST00000367537 RANGAP1P46060 587 aaPredicted RBP12.76□□□□□ -0.37
SMG7-202ENST00000367537 ZCCHC6Q5VYS8 1495 aaKnown RBP12.72□□□□□ -0.37
SMG7-202ENST00000367537 UBTFP17480 764 aaKnown RBP12.72□□□□□ -0.37
SMG7-202ENST00000367537 CENPBP07199 599 aaPredicted RBP12.7□□□□□ -0.38
SMG7-202ENST00000367537 CCER1Q8TC90 406 aaPredicted RBP12.69□□□□□ -0.38
SMG7-202ENST00000367537 TRIM26Q12899 539 aaPredicted RBP12.68□□□□□ -0.38
SMG7-202ENST00000367537 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.61□□□□□ -0.39
SMG7-202ENST00000367537 ATP1B4Q9UN42 357 aaPredicted RBP12.58□□□□□ -0.4
SMG7-202ENST00000367537 ABCC9O60706 1549 aa12.57□□□□□ -0.4
SMG7-202ENST00000367537 PABPN1Q86U42 306 aaKnown RBP eCLIP12.47□□□□□ -0.41
SMG7-202ENST00000367537 YTHDC1Q96MU7 727 aaKnown RBP12.41□□□□□ -0.42
SMG7-202ENST00000367537 NEFLP07196 543 aa12.4□□□□□ -0.42
SMG7-202ENST00000367537 SCRIBQ14160 1630 aa12.38□□□□□ -0.43
SMG7-202ENST00000367537 HNRNPUL2Q1KMD3 747 aaKnown RBP12.38□□□□□ -0.43
SMG7-202ENST00000367537 ERICH6Q7L0X2 663 aa12.37□□□□□ -0.43
SMG7-202ENST00000367537 RSF1Q96T23 1441 aaPredicted RBP12.32□□□□□ -0.44
SMG7-202ENST00000367537 CECR2Q9BXF3 1484 aa12.26□□□□□ -0.45
SMG7-202ENST00000367537 CCDC180Q9P1Z9 1646 aa12.24□□□□□ -0.45
SMG7-202ENST00000367537 DCAF1Q9Y4B6 1507 aa12.24□□□□□ -0.45
SMG7-202ENST00000367537 ITGAEP38570 1179 aa12.23□□□□□ -0.45
SMG7-202ENST00000367537 MYT1Q01538 1121 aa12.2□□□□□ -0.46
SMG7-202ENST00000367537 SCAF1Q9H7N4 1312 aaKnown RBP12.18□□□□□ -0.46
SMG7-202ENST00000367537 DIEXFQ68CQ4 756 aaKnown RBP12.18□□□□□ -0.46
SMG7-202ENST00000367537 RB1CC1Q8TDY2 1594 aa12.12□□□□□ -0.47
SMG7-202ENST00000367537 NEUROD1Q13562 356 aa12.12□□□□□ -0.47
SMG7-202ENST00000367537 MYT1LQ9UL68 1186 aa12.11□□□□□ -0.47
SMG7-202ENST00000367537 GTF3C3Q9Y5Q9 886 aa12.11□□□□□ -0.47
SMG7-202ENST00000367537 CSRNP3Q8WYN3 585 aa12.09□□□□□ -0.47
SMG7-202ENST00000367537 MROH2BQ7Z745 1585 aa12.03□□□□□ -0.48
SMG7-202ENST00000367537 POLR3GLQ9BT43 218 aa11.99□□□□□ -0.49
SMG7-202ENST00000367537 SOGA1O94964 1423 aa11.98□□□□□ -0.49
SMG7-202ENST00000367537 ACIN1Q9UKV3 1341 aaKnown RBP11.98□□□□□ -0.49
SMG7-202ENST00000367537 FAM50AQ14320 339 aaKnown RBP11.97□□□□□ -0.49
SMG7-202ENST00000367537 DAXXQ9UER7 740 aaPredicted RBP11.96□□□□□ -0.49
SMG7-202ENST00000367537 P3H3Q8IVL6 736 aa11.94□□□□□ -0.5
SMG7-202ENST00000367537 ABCC8Q09428 1581 aa11.93□□□□□ -0.5
SMG7-202ENST00000367537 MIER1Q8N108 512 aa11.92□□□□□ -0.5
SMG7-202ENST00000367537 CCDC88BA6NC98 1476 aa11.92□□□□□ -0.5
SMG7-202ENST00000367537 ZNF316A6NFI3 1004 aaPredicted RBP11.9□□□□□ -0.5
SMG7-202ENST00000367537 TRIM52Q96A61 297 aa11.9□□□□□ -0.51
SMG7-202ENST00000367537 RUSC2Q8N2Y8 1516 aa11.89□□□□□ -0.51
SMG7-202ENST00000367537 WIZO95785 1651 aa11.88□□□□□ -0.51
SMG7-202ENST00000367537 CEP162Q5TB80 1403 aa11.87□□□□□ -0.51
SMG7-202ENST00000367537 CNGB1Q14028 1251 aaPredicted RBP11.87□□□□□ -0.51
SMG7-202ENST00000367537 HIRIP3Q9BW71 556 aaPredicted RBP11.85□□□□□ -0.51
SMG7-202ENST00000367537 BCANQ96GW7 911 aa11.81□□□□□ -0.52
SMG7-202ENST00000367537 CDK11AQ9UQ88 783 aaPredicted RBP11.8□□□□□ -0.52
SMG7-202ENST00000367537 ANP32CO43423 234 aa11.79□□□□□ -0.52
SMG7-202ENST00000367537 ARID3CA6NKF2 412 aa11.79□□□□□ -0.52
SMG7-202ENST00000367537 SLC4A1APQ9BWU0 796 aaKnown RBP11.78□□□□□ -0.52
SMG7-202ENST00000367537 FBLN2P98095 1184 aa11.75□□□□□ -0.53
SMG7-202ENST00000367537 KANK4Q5T7N3 995 aaPredicted RBP11.73□□□□□ -0.53
SMG7-202ENST00000367537 CLIP1P30622 1438 aa11.72□□□□□ -0.53
SMG7-202ENST00000367537 CLSPNQ9HAW4 1339 aa11.7□□□□□ -0.54
SMG7-202ENST00000367537 WRNQ14191 1432 aaPredicted RBP eCLIP11.7□□□□□ -0.54
SMG7-202ENST00000367537 TNIKQ9UKE5 1360 aa11.68□□□□□ -0.54
SMG7-202ENST00000367537 RTL5Q5HYW3 569 aaPredicted RBP11.68□□□□□ -0.54
SMG7-202ENST00000367537 NACADO15069 1562 aa11.67□□□□□ -0.54
SMG7-202ENST00000367537 ZNF326Q5BKZ1 582 aaKnown RBP11.67□□□□□ -0.54
SMG7-202ENST00000367537 DDX10Q13206 875 aaKnown RBP11.66□□□□□ -0.54
SMG7-202ENST00000367537 EEA1Q15075 1411 aa11.65□□□□□ -0.55
SMG7-202ENST00000367537 KCNH8Q96L42 1107 aa11.64□□□□□ -0.55
SMG7-202ENST00000367537 BAZ1AQ9NRL2 1556 aaPredicted RBP11.64□□□□□ -0.55
SMG7-202ENST00000367537 SIN3AQ96ST3 1273 aa11.63□□□□□ -0.55
SMG7-202ENST00000367537 SENP3-EIF4A1A0A087X0R7 540 aa11.63□□□□□ -0.55
SMG7-202ENST00000367537 NEFMP07197 916 aa11.59□□□□□ -0.55
SMG7-202ENST00000367537 TONSLQ96HA7 1378 aa11.59□□□□□ -0.55
SMG7-202ENST00000367537 GOLGA3Q08378 1498 aa11.58□□□□□ -0.56
SMG7-202ENST00000367537 ZBTB47Q9UFB7 747 aaPredicted RBP11.58□□□□□ -0.56
SMG7-202ENST00000367537 ZNF777Q9ULD5 760 aaPredicted RBP11.57□□□□□ -0.56
SMG7-202ENST00000367537 RAPGEF2Q9Y4G8 1499 aa11.56□□□□□ -0.56
SMG7-202ENST00000367537 CHIC2Q9UKJ5 165 aa11.55□□□□□ -0.56
SMG7-202ENST00000367537 NPM1P06748 294 aaKnown RBP eCLIP11.51□□□□□ -0.57
SMG7-202ENST00000367537 IRX6P78412 446 aaPredicted RBP11.51□□□□□ -0.57
SMG7-202ENST00000367537 CANXP27824 592 aaKnown RBP11.51□□□□□ -0.57
SMG7-202ENST00000367537 BAZ1BQ9UIG0 1483 aaKnown RBP11.5□□□□□ -0.57
SMG7-202ENST00000367537 MTUS2Q5JR59 1369 aa11.49□□□□□ -0.57
SMG7-202ENST00000367537 FKBP8Q14318 412 aa11.49□□□□□ -0.57
SMG7-202ENST00000367537 ESF1Q9H501 851 aaKnown RBP11.47□□□□□ -0.57
SMG7-202ENST00000367537 CEP164Q9UPV0 1460 aa11.47□□□□□ -0.57
SMG7-202ENST00000367537 TSPY4P0CV99 314 aa11.47□□□□□ -0.57
SMG7-202ENST00000367537 TSPY10P0CW01 314 aa11.47□□□□□ -0.57
SMG7-202ENST00000367537 SMARCA2P51531 1590 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms