RNA–Protein interactions for RNA: ENST00000370275.8

ARFGAP1-202, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARFGAP1, Length 3,467 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-202ENST00000370275 NISCHQ9Y2I1 1504 aa29.37■■■□□ 2.29
ARFGAP1-202ENST00000370275 SHROOM4Q9ULL8 1493 aa25.7■■□□□ 1.7
ARFGAP1-202ENST00000370275 SUPT5HO00267 1087 aaKnown RBP25.28■■□□□ 1.64
ARFGAP1-202ENST00000370275 DCAF8L2P0C7V8 631 aa24.85■■□□□ 1.57
ARFGAP1-202ENST00000370275 ZCCHC6Q5VYS8 1495 aaKnown RBP24.85■■□□□ 1.57
ARFGAP1-202ENST00000370275 CCDC180Q9P1Z9 1646 aa24.66■■□□□ 1.54
ARFGAP1-202ENST00000370275 MYO15BQ96JP2 1530 aa24.48■■□□□ 1.51
ARFGAP1-202ENST00000370275 CHIC1Q5VXU3 224 aa24.46■■□□□ 1.51
ARFGAP1-202ENST00000370275 PCGF6Q9BYE7 350 aa24.09■■□□□ 1.45
ARFGAP1-202ENST00000370275 HRCP23327 699 aa24.04■■□□□ 1.44
ARFGAP1-202ENST00000370275 LOC105371045A0A1W2PR82 267 aa23.96■■□□□ 1.43
ARFGAP1-202ENST00000370275 DCAF1Q9Y4B6 1507 aa23.84■■□□□ 1.41
ARFGAP1-202ENST00000370275 PPARGC1BQ86YN6 1023 aaKnown RBP23.81■■□□□ 1.4
ARFGAP1-202ENST00000370275 SCRIBQ14160 1630 aa23.54■■□□□ 1.36
ARFGAP1-202ENST00000370275 ABCC9O60706 1549 aa23.48■■□□□ 1.35
ARFGAP1-202ENST00000370275 EHMT2Q96KQ7 1210 aa23.44■■□□□ 1.34
ARFGAP1-202ENST00000370275 FAM9AQ8IZU1 332 aaPredicted RBP23.43■■□□□ 1.34
ARFGAP1-202ENST00000370275 RSF1Q96T23 1441 aaPredicted RBP23.42■■□□□ 1.34
ARFGAP1-202ENST00000370275 TRIM41Q8WV44 630 aa23.35■■□□□ 1.33
ARFGAP1-202ENST00000370275 TRIM26Q12899 539 aaPredicted RBP23.35■■□□□ 1.33
ARFGAP1-202ENST00000370275 RB1CC1Q8TDY2 1594 aa23.27■■□□□ 1.31
ARFGAP1-202ENST00000370275 CECR2Q9BXF3 1484 aa23.1■■□□□ 1.29
ARFGAP1-202ENST00000370275 MROH2BQ7Z745 1585 aa22.97■■□□□ 1.27
ARFGAP1-202ENST00000370275 WIZO95785 1651 aa22.88■■□□□ 1.25
ARFGAP1-202ENST00000370275 NACADO15069 1562 aa22.82■■□□□ 1.24
ARFGAP1-202ENST00000370275 ZEB1P37275 1124 aaPredicted RBP22.78■■□□□ 1.24
ARFGAP1-202ENST00000370275 TTBK1Q5TCY1 1321 aaPredicted RBP22.69■■□□□ 1.22
ARFGAP1-202ENST00000370275 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.62■■□□□ 1.21
ARFGAP1-202ENST00000370275 BAZ1AQ9NRL2 1556 aaPredicted RBP22.56■■□□□ 1.2
ARFGAP1-202ENST00000370275 ABCC8Q09428 1581 aa22.53■■□□□ 1.2
ARFGAP1-202ENST00000370275 CCER1Q8TC90 406 aaPredicted RBP22.49■■□□□ 1.19
ARFGAP1-202ENST00000370275 EIF4G1Q04637 1599 aaKnown RBP22.46■■□□□ 1.19
ARFGAP1-202ENST00000370275 CCDC88BA6NC98 1476 aa22.45■■□□□ 1.19
ARFGAP1-202ENST00000370275 SCAF1Q9H7N4 1312 aaKnown RBP22.4■■□□□ 1.18
ARFGAP1-202ENST00000370275 SOGA1O94964 1423 aa22.36■■□□□ 1.17
ARFGAP1-202ENST00000370275 TOP2AP11388 1531 aaKnown RBP22.35■■□□□ 1.17
ARFGAP1-202ENST00000370275 PABPN1Q86U42 306 aaKnown RBP eCLIP22.33■■□□□ 1.162e-7■■■□□ 17.3
ARFGAP1-202ENST00000370275 SMARCA4P51532 1647 aa22.33■■□□□ 1.16
ARFGAP1-202ENST00000370275 SMARCA2P51531 1590 aa22.3■■□□□ 1.16
ARFGAP1-202ENST00000370275 UBTFP17480 764 aaKnown RBP22.29■■□□□ 1.16
ARFGAP1-202ENST00000370275 RUSC2Q8N2Y8 1516 aa22.28■■□□□ 1.16
ARFGAP1-202ENST00000370275 CEP162Q5TB80 1403 aa22.28■■□□□ 1.16
ARFGAP1-202ENST00000370275 UNC13AQ9UPW8 1703 aa22.23■■□□□ 1.15
ARFGAP1-202ENST00000370275 CSRNP3Q8WYN3 585 aa22.19■■□□□ 1.14
ARFGAP1-202ENST00000370275 TNIKQ9UKE5 1360 aa22.12■■□□□ 1.13
ARFGAP1-202ENST00000370275 WRNQ14191 1432 aaPredicted RBP eCLIP22.12■■□□□ 1.13
ARFGAP1-202ENST00000370275 DIEXFQ68CQ4 756 aaKnown RBP22.11■■□□□ 1.13
ARFGAP1-202ENST00000370275 NEUROD1Q13562 356 aa22.09■■□□□ 1.13
ARFGAP1-202ENST00000370275 RANGAP1P46060 587 aaPredicted RBP22.07■■□□□ 1.12
ARFGAP1-202ENST00000370275 ACIN1Q9UKV3 1341 aaKnown RBP22.01■■□□□ 1.11
ARFGAP1-202ENST00000370275 HNRNPUL2Q1KMD3 747 aaKnown RBP22■■□□□ 1.11
ARFGAP1-202ENST00000370275 GOLGA3Q08378 1498 aa21.97■■□□□ 1.11
ARFGAP1-202ENST00000370275 EEA1Q15075 1411 aa21.95■■□□□ 1.1
ARFGAP1-202ENST00000370275 BICRAQ9NZM4 1560 aa21.94■■□□□ 1.1
ARFGAP1-202ENST00000370275 SYNJ1O43426 1573 aa21.89■■□□□ 1.1
ARFGAP1-202ENST00000370275 GTF3C3Q9Y5Q9 886 aa21.88■■□□□ 1.09
ARFGAP1-202ENST00000370275 YTHDC1Q96MU7 727 aaKnown RBP21.84■■□□□ 1.09
ARFGAP1-202ENST00000370275 ZNF316A6NFI3 1004 aaPredicted RBP21.82■■□□□ 1.08
ARFGAP1-202ENST00000370275 CLIP1P30622 1438 aa21.82■■□□□ 1.08
ARFGAP1-202ENST00000370275 PELP1Q8IZL8 1130 aaKnown RBP21.81■■□□□ 1.08
ARFGAP1-202ENST00000370275 CENPBP07199 599 aaPredicted RBP21.8■■□□□ 1.08
ARFGAP1-202ENST00000370275 CEP164Q9UPV0 1460 aa21.8■■□□□ 1.08
ARFGAP1-202ENST00000370275 RAPGEF2Q9Y4G8 1499 aa21.76■■□□□ 1.07
ARFGAP1-202ENST00000370275 ATAD2BQ9ULI0 1458 aa21.74■■□□□ 1.07
ARFGAP1-202ENST00000370275 APLP2Q06481 763 aa21.74■■□□□ 1.07
ARFGAP1-202ENST00000370275 BAZ1BQ9UIG0 1483 aaKnown RBP21.73■■□□□ 1.07
ARFGAP1-202ENST00000370275 PEG3Q9GZU2 1588 aa21.71■■□□□ 1.07
ARFGAP1-202ENST00000370275 KIF21BO75037 1637 aa21.69■■□□□ 1.06
ARFGAP1-202ENST00000370275 VPS8Q8N3P4 1428 aa21.67■■□□□ 1.06
ARFGAP1-202ENST00000370275 MIER1Q8N108 512 aa21.67■■□□□ 1.06
ARFGAP1-202ENST00000370275 KANK4Q5T7N3 995 aaPredicted RBP21.51■■□□□ 1.03
ARFGAP1-202ENST00000370275 TOP2BQ02880 1626 aa21.48■■□□□ 1.03
ARFGAP1-202ENST00000370275 ITGAEP38570 1179 aa21.42■■□□□ 1.02
ARFGAP1-202ENST00000370275 ARAP1Q96P48 1450 aa21.4■■□□□ 1.02
ARFGAP1-202ENST00000370275 PRXQ9BXM0 1461 aa21.36■■□□□ 1.01
ARFGAP1-202ENST00000370275 DHX57Q6P158 1386 aaKnown RBP21.36■■□□□ 1.01
ARFGAP1-202ENST00000370275 BIVM-ERCC5R4GMW8 1640 aa21.34■■□□□ 1.01
ARFGAP1-202ENST00000370275 CUX1P39880 1505 aa21.34■■□□□ 1.01
ARFGAP1-202ENST00000370275 ERICH3Q5RHP9 1530 aa21.28■■□□□ 1
ARFGAP1-202ENST00000370275 KIF27Q86VH2 1401 aa21.26■□□□□ 0.99
ARFGAP1-202ENST00000370275 ARHGAP35Q9NRY4 1499 aa21.19■□□□□ 0.98
ARFGAP1-202ENST00000370275 NCAPD3P42695 1498 aa21.19■□□□□ 0.98
ARFGAP1-202ENST00000370275 CCNB3Q8WWL7 1395 aa21.16■□□□□ 0.98
ARFGAP1-202ENST00000370275 RRBP1Q9P2E9 1410 aaKnown RBP21.15■□□□□ 0.98
ARFGAP1-202ENST00000370275 CLSPNQ9HAW4 1339 aa21.14■□□□□ 0.97
ARFGAP1-202ENST00000370275 P3H3Q8IVL6 736 aa21.14■□□□□ 0.97
ARFGAP1-202ENST00000370275 HMGXB3Q12766 1538 aa21.13■□□□□ 0.97
ARFGAP1-202ENST00000370275 ATP1B4Q9UN42 357 aaPredicted RBP21.12■□□□□ 0.97
ARFGAP1-202ENST00000370275 CFTRP13569 1480 aa21.12■□□□□ 0.97
ARFGAP1-202ENST00000370275 CUX2O14529 1486 aa21.12■□□□□ 0.97
ARFGAP1-202ENST00000370275 IGF1RP08069 1367 aa21.06■□□□□ 0.96
ARFGAP1-202ENST00000370275 KCNH8Q96L42 1107 aa21.06■□□□□ 0.96
ARFGAP1-202ENST00000370275 RAB3GAP2Q9H2M9 1393 aa21.06■□□□□ 0.96
ARFGAP1-202ENST00000370275 FAM50AQ14320 339 aaKnown RBP21.05■□□□□ 0.96
ARFGAP1-202ENST00000370275 SIN3AQ96ST3 1273 aa21.01■□□□□ 0.95
ARFGAP1-202ENST00000370275 CARMIL1Q5VZK9 1371 aa21■□□□□ 0.95
ARFGAP1-202ENST00000370275 SUPT16HQ9Y5B9 1047 aaKnown RBP20.97■□□□□ 0.95
ARFGAP1-202ENST00000370275 PHLDB1Q86UU1 1377 aa20.96■□□□□ 0.95
ARFGAP1-202ENST00000370275 FGD5Q6ZNL6 1462 aa20.95■□□□□ 0.94
ARFGAP1-202ENST00000370275 HIRIP3Q9BW71 556 aaPredicted RBP20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms