RNA–Protein interactions for RNA: ENST00000533757.5

PHF21A-219, Transcript of PHD finger protein 21A, humanhuman

TSL 5

Gene PHF21A, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF21A-219ENST00000533757 AEBP2Q6ZN18 517 aaPredicted RBP31.83■■■□□ 2.69
PHF21A-219ENST00000533757 CHIC1Q5VXU3 224 aa29.93■■■□□ 2.38
PHF21A-219ENST00000533757 SENP3Q9H4L4 574 aaPredicted RBP26.95■■□□□ 1.9
PHF21A-219ENST00000533757 PHF23Q9BUL5 403 aaPredicted RBP26.65■■□□□ 1.86
PHF21A-219ENST00000533757 FOXD1Q16676 465 aa25.28■■□□□ 1.64
PHF21A-219ENST00000533757 PLPPR3Q6T4P5 718 aa23.75■■□□□ 1.39
PHF21A-219ENST00000533757 PPP6R1Q9UPN7 881 aa23.59■■□□□ 1.37
PHF21A-219ENST00000533757 MSH5O43196 834 aa23.55■■□□□ 1.36
PHF21A-219ENST00000533757 PIAS4Q8N2W9 510 aaPredicted RBP23.49■■□□□ 1.35
PHF21A-219ENST00000533757 ADRA2BP18089 450 aa23.44■■□□□ 1.34
PHF21A-219ENST00000533757 POTEDQ86YR6 584 aa23.41■■□□□ 1.34
PHF21A-219ENST00000533757 MAPK8IP2Q13387 824 aaPredicted RBP21.62■■□□□ 1.05
PHF21A-219ENST00000533757 DMRT2Q9Y5R5 561 aa21.41■■□□□ 1.02
PHF21A-219ENST00000533757 SCAF1Q9H7N4 1312 aaKnown RBP21.19■□□□□ 0.98
PHF21A-219ENST00000533757 PPP4R3CPQ6ZMV5 832 aa20.85■□□□□ 0.93
PHF21A-219ENST00000533757 HOXD11P31277 338 aaPredicted RBP20.58■□□□□ 0.89
PHF21A-219ENST00000533757 CNKSR2Q8WXI2 1034 aa20.45■□□□□ 0.86
PHF21A-219ENST00000533757 DCAF8L1A6NGE4 600 aa20.43■□□□□ 0.86
PHF21A-219ENST00000533757 RNF216Q9NWF9 866 aaPredicted RBP20.33■□□□□ 0.85
PHF21A-219ENST00000533757 CACNB1Q02641 598 aaPredicted RBP20.32■□□□□ 0.84
PHF21A-219ENST00000533757 RNF39Q9H2S5 420 aa20.2■□□□□ 0.82
PHF21A-219ENST00000533757 NCBP3Q53F19 620 aaKnown RBP19.84■□□□□ 0.77
PHF21A-219ENST00000533757 DNAJC5BQ9UF47 199 aa19.82■□□□□ 0.76
PHF21A-219ENST00000533757 C1QBPQ07021 282 aaKnown RBP19.79■□□□□ 0.76
PHF21A-219ENST00000533757 NPM3O75607 178 aaKnown RBP19.77■□□□□ 0.76
PHF21A-219ENST00000533757 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.49■□□□□ 0.71
PHF21A-219ENST00000533757 KCNA4P22459 653 aa19.27■□□□□ 0.68
PHF21A-219ENST00000533757 U3KPZ7 1027 aaPredicted RBP19.22■□□□□ 0.67
PHF21A-219ENST00000533757 SPINK5Q9NQ38 1064 aaPredicted RBP19■□□□□ 0.63
PHF21A-219ENST00000533757 SLC4A2P04920 1241 aa18.99■□□□□ 0.63
PHF21A-219ENST00000533757 DSG3P32926 999 aa18.86■□□□□ 0.61
PHF21A-219ENST00000533757 CAPN15O75808 1086 aa18.83■□□□□ 0.6
PHF21A-219ENST00000533757 TRHP20396 242 aaPredicted RBP18.5■□□□□ 0.55
PHF21A-219ENST00000533757 ABCB7O75027 752 aa18.47■□□□□ 0.55
PHF21A-219ENST00000533757 ZNF219Q9P2Y4 722 aaPredicted RBP18.41■□□□□ 0.54
PHF21A-219ENST00000533757 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.37■□□□□ 0.53
PHF21A-219ENST00000533757 HNRNPUL2Q1KMD3 747 aaKnown RBP18.37■□□□□ 0.53
PHF21A-219ENST00000533757 APLP2Q06481 763 aa18.35■□□□□ 0.53
PHF21A-219ENST00000533757 SAMD1Q6SPF0 538 aaPredicted RBP18.31■□□□□ 0.52
PHF21A-219ENST00000533757 POTEHQ6S545 545 aa18.26■□□□□ 0.51
PHF21A-219ENST00000533757 MYCNP04198 464 aaPredicted RBP18.18■□□□□ 0.5
PHF21A-219ENST00000533757 SLC4A1APQ9BWU0 796 aaKnown RBP18.05■□□□□ 0.48
PHF21A-219ENST00000533757 POLA2Q14181 598 aa18■□□□□ 0.47
PHF21A-219ENST00000533757 ATF5Q9Y2D1 282 aaPredicted RBP17.97■□□□□ 0.47
PHF21A-219ENST00000533757 FOXD4L1Q9NU39 408 aa17.93■□□□□ 0.46
PHF21A-219ENST00000533757 ZBTB22O15209 634 aa17.82■□□□□ 0.44
PHF21A-219ENST00000533757 RBM42Q9BTD8 480 aaKnown RBP17.82■□□□□ 0.44
PHF21A-219ENST00000533757 CHRDL2Q6WN34 429 aa17.62■□□□□ 0.41
PHF21A-219ENST00000533757 OSCARQ8IYS5 282 aa17.49■□□□□ 0.39
PHF21A-219ENST00000533757 ZBTB12Q9Y330 459 aaPredicted RBP17.48■□□□□ 0.39
PHF21A-219ENST00000533757 AKT1S1Q96B36 256 aa17.45■□□□□ 0.38
PHF21A-219ENST00000533757 REM2Q8IYK8 340 aaPredicted RBP17.35■□□□□ 0.37
PHF21A-219ENST00000533757 ATXN8OSP0DMR3 200 aa17.34■□□□□ 0.37
PHF21A-219ENST00000533757 PIP4P2Q8N4L2 257 aa17.22■□□□□ 0.35
PHF21A-219ENST00000533757 PITPNM1O00562 1244 aa17.21■□□□□ 0.35
PHF21A-219ENST00000533757 MKRN4PQ13434 485 aaPredicted RBP17.12■□□□□ 0.33
PHF21A-219ENST00000533757 FXR2P51116 673 aaKnown RBP eCLIP17.08■□□□□ 0.32
PHF21A-219ENST00000533757 SP7Q8TDD2 431 aaPredicted RBP17.03■□□□□ 0.32
PHF21A-219ENST00000533757 SPDYE2BA6NHP3 402 aa17.01■□□□□ 0.31
PHF21A-219ENST00000533757 SPDYE6P0CI01 402 aa17.01■□□□□ 0.31
PHF21A-219ENST00000533757 SPDYE2Q495Y8 402 aa17.01■□□□□ 0.31
PHF21A-219ENST00000533757 FBLN2P98095 1184 aa16.99■□□□□ 0.31
PHF21A-219ENST00000533757 SSUH2Q9Y2M2 353 aa16.87■□□□□ 0.29
PHF21A-219ENST00000533757 HAX1O00165 279 aa16.84■□□□□ 0.29
PHF21A-219ENST00000533757 EVX2Q03828 476 aa16.84■□□□□ 0.29
PHF21A-219ENST00000533757 ZNF692Q9BU19 519 aaPredicted RBP16.78■□□□□ 0.28
PHF21A-219ENST00000533757 CSRNP3Q8WYN3 585 aa16.76■□□□□ 0.27
PHF21A-219ENST00000533757 CLEC11AQ9Y240 323 aa16.73■□□□□ 0.27
PHF21A-219ENST00000533757 SPDYE1Q8NFV5 336 aaPredicted RBP16.72■□□□□ 0.27
PHF21A-219ENST00000533757 PRKAR2AP13861 404 aaKnown RBP16.7■□□□□ 0.26
PHF21A-219ENST00000533757 PABPN1Q86U42 306 aaKnown RBP eCLIP16.57■□□□□ 0.24
PHF21A-219ENST00000533757 CHADLQ6NUI6 762 aa16.55■□□□□ 0.24
PHF21A-219ENST00000533757 C19orf67A6NJJ6 358 aa16.54■□□□□ 0.24
PHF21A-219ENST00000533757 PRR29P0C7W0 189 aa16.4■□□□□ 0.22
PHF21A-219ENST00000533757 EHMT2Q96KQ7 1210 aa16.39■□□□□ 0.21
PHF21A-219ENST00000533757 GABBR2O75899 941 aa16.33■□□□□ 0.2
PHF21A-219ENST00000533757 FARP1Q9Y4F1 1045 aaPredicted RBP16.23■□□□□ 0.19
PHF21A-219ENST00000533757 CD44P16070 742 aaKnown RBP16.15■□□□□ 0.18
PHF21A-219ENST00000533757 CREBZFQ9NS37 354 aa16.1■□□□□ 0.17
PHF21A-219ENST00000533757 POTEIP0CG38 1075 aa16.09■□□□□ 0.17
PHF21A-219ENST00000533757 SPDYE4A6NLX3 237 aa16.07■□□□□ 0.16
PHF21A-219ENST00000533757 LHX8Q68G74 356 aa15.95■□□□□ 0.14
PHF21A-219ENST00000533757 STAG3Q9UJ98 1225 aa15.94■□□□□ 0.14
PHF21A-219ENST00000533757 ZNF579Q8NAF0 562 aaKnown RBP15.92■□□□□ 0.14
PHF21A-219ENST00000533757 MNX1P50219 401 aaPredicted RBP15.88■□□□□ 0.13
PHF21A-219ENST00000533757 ZRANB1Q9UGI0 708 aa15.88■□□□□ 0.13
PHF21A-219ENST00000533757 CLCN6P51797 869 aa15.8■□□□□ 0.12
PHF21A-219ENST00000533757 GALR2O43603 387 aaPredicted RBP15.79■□□□□ 0.12
PHF21A-219ENST00000533757 PROM2Q8N271 834 aa15.78■□□□□ 0.12
PHF21A-219ENST00000533757 PHF12Q96QT6 1004 aa15.74■□□□□ 0.11
PHF21A-219ENST00000533757 DCBLD2Q96PD2 775 aa15.71■□□□□ 0.11
PHF21A-219ENST00000533757 NPM1P06748 294 aaKnown RBP eCLIP15.6■□□□□ 0.09
PHF21A-219ENST00000533757 POTEB2H3BUK9 544 aa15.57■□□□□ 0.08
PHF21A-219ENST00000533757 PAK3O75914 559 aaPredicted RBP15.57■□□□□ 0.08
PHF21A-219ENST00000533757 PELP1Q8IZL8 1130 aaKnown RBP15.56■□□□□ 0.08
PHF21A-219ENST00000533757 MS4A3Q96HJ5 214 aa15.51■□□□□ 0.07
PHF21A-219ENST00000533757 OTUD5Q96G74 571 aa15.47■□□□□ 0.07
PHF21A-219ENST00000533757 CCDC61Q9Y6R9 512 aa15.45■□□□□ 0.06
PHF21A-219ENST00000533757 ASTLQ6HA08 431 aaPredicted RBP15.42■□□□□ 0.06
PHF21A-219ENST00000533757 TSPYL2Q9H2G4 693 aaPredicted RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms