RNA–Protein interactions for RNA: ENST00000549076.1

ARFGAP1-222, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2

Gene ARFGAP1, Length 913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-222ENST00000549076 NISCHQ9Y2I1 1504 aa41.57■■■■■ 4.25
ARFGAP1-222ENST00000549076 CCDC180Q9P1Z9 1646 aa37.14■■■■□ 3.54
ARFGAP1-222ENST00000549076 ABCC9O60706 1549 aa36.81■■■■□ 3.48
ARFGAP1-222ENST00000549076 RB1CC1Q8TDY2 1594 aa35.23■■■■□ 3.23
ARFGAP1-222ENST00000549076 DCAF8L2P0C7V8 631 aa35.07■■■■□ 3.2
ARFGAP1-222ENST00000549076 NACADO15069 1562 aa35.07■■■■□ 3.2
ARFGAP1-222ENST00000549076 MYO15BQ96JP2 1530 aa34.7■■■■□ 3.14
ARFGAP1-222ENST00000549076 ZCCHC6Q5VYS8 1495 aaKnown RBP34.51■■■■□ 3.11
ARFGAP1-222ENST00000549076 DCAF1Q9Y4B6 1507 aa34.37■■■■□ 3.09
ARFGAP1-222ENST00000549076 PABPN1Q86U42 306 aaKnown RBP eCLIP34.35■■■■□ 3.092e-11■■■□□ 17
ARFGAP1-222ENST00000549076 UNC13AQ9UPW8 1703 aa34.3■■■■□ 3.08
ARFGAP1-222ENST00000549076 DNAJC5BQ9UF47 199 aa34.16■■■■□ 3.06
ARFGAP1-222ENST00000549076 BICRAQ9NZM4 1560 aa34.08■■■■□ 3.05
ARFGAP1-222ENST00000549076 SCRIBQ14160 1630 aa33.86■■■■□ 3.01
ARFGAP1-222ENST00000549076 SHROOM4Q9ULL8 1493 aa33.78■■■■□ 3
ARFGAP1-222ENST00000549076 EIF4G1Q04637 1599 aaKnown RBP33.27■■■□□ 2.92
ARFGAP1-222ENST00000549076 CC2D2AQ9P2K1 1620 aa33.24■■■□□ 2.91
ARFGAP1-222ENST00000549076 CECR2Q9BXF3 1484 aa33.15■■■□□ 2.9
ARFGAP1-222ENST00000549076 NCAPD3P42695 1498 aa32.36■■■□□ 2.77
ARFGAP1-222ENST00000549076 SMARCA4P51532 1647 aa32.33■■■□□ 2.77
ARFGAP1-222ENST00000549076 ATAD2BQ9ULI0 1458 aa32.29■■■□□ 2.76
ARFGAP1-222ENST00000549076 BAZ1AQ9NRL2 1556 aaPredicted RBP32.28■■■□□ 2.76
ARFGAP1-222ENST00000549076 SMARCA2P51531 1590 aa32.27■■■□□ 2.76
ARFGAP1-222ENST00000549076 HMGXB3Q12766 1538 aa32.14■■■□□ 2.74
ARFGAP1-222ENST00000549076 BAZ1BQ9UIG0 1483 aaKnown RBP32.04■■■□□ 2.72
ARFGAP1-222ENST00000549076 PEG3Q9GZU2 1588 aa32.02■■■□□ 2.72
ARFGAP1-222ENST00000549076 MROH2BQ7Z745 1585 aa32■■■□□ 2.71
ARFGAP1-222ENST00000549076 ERCC6Q03468 1493 aa31.83■■■□□ 2.69
ARFGAP1-222ENST00000549076 NESP48681 1621 aa31.67■■■□□ 2.66
ARFGAP1-222ENST00000549076 WIZO95785 1651 aa31.62■■■□□ 2.65
ARFGAP1-222ENST00000549076 CUX2O14529 1486 aa31.61■■■□□ 2.65
ARFGAP1-222ENST00000549076 LAMC3Q9Y6N6 1575 aa31.58■■■□□ 2.65
ARFGAP1-222ENST00000549076 RSF1Q96T23 1441 aaPredicted RBP31.5■■■□□ 2.63
ARFGAP1-222ENST00000549076 PDS5BQ9NTI5 1447 aa31.45■■■□□ 2.63
ARFGAP1-222ENST00000549076 CADPSQ9ULU8 1353 aa31.43■■■□□ 2.62
ARFGAP1-222ENST00000549076 TOP2AP11388 1531 aaKnown RBP31.29■■■□□ 2.6
ARFGAP1-222ENST00000549076 THOC2Q8NI27 1593 aaKnown RBP31.27■■■□□ 2.6
ARFGAP1-222ENST00000549076 KIF21AQ7Z4S6 1674 aa31.27■■■□□ 2.6
ARFGAP1-222ENST00000549076 DNAJC5Q9H3Z4 198 aa31.2■■■□□ 2.59
ARFGAP1-222ENST00000549076 CFTRP13569 1480 aa31.11■■■□□ 2.57
ARFGAP1-222ENST00000549076 MRC2Q9UBG0 1479 aa31.1■■■□□ 2.57
ARFGAP1-222ENST00000549076 CEP164Q9UPV0 1460 aa31.06■■■□□ 2.56
ARFGAP1-222ENST00000549076 FANCD2Q9BXW9 1451 aa31.04■■■□□ 2.56
ARFGAP1-222ENST00000549076 WDR62O43379 1518 aa30.97■■■□□ 2.55
ARFGAP1-222ENST00000549076 CCDC88BA6NC98 1476 aa30.94■■■□□ 2.54
ARFGAP1-222ENST00000549076 PRDM2Q13029 1718 aa30.78■■■□□ 2.52
ARFGAP1-222ENST00000549076 URB2Q14146 1524 aaKnown RBP30.72■■■□□ 2.51
ARFGAP1-222ENST00000549076 ABCC8Q09428 1581 aa30.53■■■□□ 2.48
ARFGAP1-222ENST00000549076 TOPBP1Q92547 1522 aa30.47■■■□□ 2.47
ARFGAP1-222ENST00000549076 SUPT5HO00267 1087 aaKnown RBP30.47■■■□□ 2.47
ARFGAP1-222ENST00000549076 IFT140Q96RY7 1462 aa30.44■■■□□ 2.46
ARFGAP1-222ENST00000549076 DNMBPQ6XZF7 1577 aa30.41■■■□□ 2.46
ARFGAP1-222ENST00000549076 OSCARQ8IYS5 282 aa30.3■■■□□ 2.44
ARFGAP1-222ENST00000549076 ZNF608Q9ULD9 1512 aaPredicted RBP30.27■■■□□ 2.44
ARFGAP1-222ENST00000549076 POLA1P09884 1462 aaPredicted RBP30.19■■■□□ 2.42
ARFGAP1-222ENST00000549076 TARBP1Q13395 1621 aaKnown RBP30.14■■■□□ 2.41
ARFGAP1-222ENST00000549076 EIF4G3O43432 1585 aaKnown RBP30.13■■■□□ 2.41
ARFGAP1-222ENST00000549076 SOGA1O94964 1423 aa30.11■■■□□ 2.41
ARFGAP1-222ENST00000549076 AQRO60306 1485 aaKnown RBP eCLIP30.09■■■□□ 2.41
ARFGAP1-222ENST00000549076 CUX1P39880 1505 aa30.06■■■□□ 2.4
ARFGAP1-222ENST00000549076 FGD5Q6ZNL6 1462 aa30.06■■■□□ 2.4
ARFGAP1-222ENST00000549076 RAD54L2Q9Y4B4 1467 aa30.06■■■□□ 2.4
ARFGAP1-222ENST00000549076 TRIM41Q8WV44 630 aa30.02■■■□□ 2.4
ARFGAP1-222ENST00000549076 TDRD9Q8NDG6 1382 aaKnown RBP29.98■■■□□ 2.39
ARFGAP1-222ENST00000549076 WDR97A6NE52 1622 aa29.93■■■□□ 2.38
ARFGAP1-222ENST00000549076 FBLN2P98095 1184 aa29.92■■■□□ 2.38
ARFGAP1-222ENST00000549076 CHD1O14646 1710 aa29.82■■■□□ 2.36
ARFGAP1-222ENST00000549076 GRIN2BQ13224 1484 aa29.8■■■□□ 2.36
ARFGAP1-222ENST00000549076 SNAPC4Q5SXM2 1469 aa29.79■■■□□ 2.36
ARFGAP1-222ENST00000549076 CHMP7Q8WUX9 453 aaPredicted RBP29.77■■■□□ 2.36
ARFGAP1-222ENST00000549076 MAGI1Q96QZ7 1491 aaPredicted RBP29.76■■■□□ 2.35
ARFGAP1-222ENST00000549076 WRNQ14191 1432 aaPredicted RBP eCLIP29.76■■■□□ 2.35
ARFGAP1-222ENST00000549076 ABCA10Q8WWZ4 1543 aa29.75■■■□□ 2.35
ARFGAP1-222ENST00000549076 GAPVD1Q14C86 1478 aa29.74■■■□□ 2.35
ARFGAP1-222ENST00000549076 RIMBP3CA6NJZ7 1639 aa29.74■■■□□ 2.35
ARFGAP1-222ENST00000549076 RIMBP3BA6NNM3 1639 aa29.74■■■□□ 2.35
ARFGAP1-222ENST00000549076 RIMBP3Q9UFD9 1639 aa29.74■■■□□ 2.35
ARFGAP1-222ENST00000549076 ARHGEF11O15085 1522 aa29.71■■■□□ 2.35
ARFGAP1-222ENST00000549076 TOP2BQ02880 1626 aa29.69■■■□□ 2.34
ARFGAP1-222ENST00000549076 BIVM-ERCC5R4GMW8 1640 aa29.67■■■□□ 2.34
ARFGAP1-222ENST00000549076 SYNJ2O15056 1496 aa29.65■■■□□ 2.34
ARFGAP1-222ENST00000549076 SYNJ1O43426 1573 aa29.63■■■□□ 2.33
ARFGAP1-222ENST00000549076 PBRM1Q86U86 1689 aa29.63■■■□□ 2.33
ARFGAP1-222ENST00000549076 ABCA5Q8WWZ7 1642 aa29.62■■■□□ 2.33
ARFGAP1-222ENST00000549076 CYB5RLQ6IPT4 315 aa29.55■■■□□ 2.32
ARFGAP1-222ENST00000549076 CLASP1Q7Z460 1538 aa29.5■■■□□ 2.31
ARFGAP1-222ENST00000549076 ARAP1Q96P48 1450 aa29.42■■■□□ 2.3
ARFGAP1-222ENST00000549076 GRIN2AQ12879 1464 aa29.39■■■□□ 2.3
ARFGAP1-222ENST00000549076 ERICH3Q5RHP9 1530 aa29.39■■■□□ 2.3
ARFGAP1-222ENST00000549076 ADAMTS12P58397 1594 aa29.39■■■□□ 2.29
ARFGAP1-222ENST00000549076 FHAD1B1AJZ9 1412 aa29.38■■■□□ 2.29
ARFGAP1-222ENST00000549076 NUP160Q12769 1436 aa29.27■■■□□ 2.28
ARFGAP1-222ENST00000549076 CEP170Q5SW79 1584 aa29.22■■■□□ 2.27
ARFGAP1-222ENST00000549076 KIF27Q86VH2 1401 aa29.2■■■□□ 2.27
ARFGAP1-222ENST00000549076 TRHP20396 242 aaPredicted RBP29.15■■■□□ 2.26
ARFGAP1-222ENST00000549076 IGF1RP08069 1367 aa29.11■■■□□ 2.25
ARFGAP1-222ENST00000549076 SHROOM2Q13796 1616 aa29.05■■■□□ 2.24
ARFGAP1-222ENST00000549076 JPH4Q96JJ6 628 aa29.04■■■□□ 2.24
ARFGAP1-222ENST00000549076 CUL7Q14999 1698 aa29.03■■■□□ 2.24
ARFGAP1-222ENST00000549076 ERCC6L2Q5T890 1561 aa29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms