RNA–Protein interactions for RNA: ENST00000507691.6

SMG7-213, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG7, Length 760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-213ENST00000507691 NISCHQ9Y2I1 1504 aa43.35■■■■■ 4.53
SMG7-213ENST00000507691 ABCC9O60706 1549 aa39.22■■■■□ 3.87
SMG7-213ENST00000507691 CCDC180Q9P1Z9 1646 aa39.04■■■■□ 3.84
SMG7-213ENST00000507691 RB1CC1Q8TDY2 1594 aa37.29■■■■□ 3.56
SMG7-213ENST00000507691 DNAJC5BQ9UF47 199 aa37.05■■■■□ 3.52
SMG7-213ENST00000507691 NACADO15069 1562 aa37■■■■□ 3.51
SMG7-213ENST00000507691 DCAF8L2P0C7V8 631 aa36.58■■■■□ 3.45
SMG7-213ENST00000507691 MYO15BQ96JP2 1530 aa36.46■■■■□ 3.43
SMG7-213ENST00000507691 PABPN1Q86U42 306 aaKnown RBP eCLIP36.45■■■■□ 3.43
SMG7-213ENST00000507691 UNC13AQ9UPW8 1703 aa36.38■■■■□ 3.41
SMG7-213ENST00000507691 BICRAQ9NZM4 1560 aa36.19■■■■□ 3.38
SMG7-213ENST00000507691 ZCCHC6Q5VYS8 1495 aaKnown RBP35.88■■■■□ 3.33
SMG7-213ENST00000507691 DCAF1Q9Y4B6 1507 aa35.87■■■■□ 3.33
SMG7-213ENST00000507691 SHROOM4Q9ULL8 1493 aa35.8■■■■□ 3.32
SMG7-213ENST00000507691 SCRIBQ14160 1630 aa35.46■■■■□ 3.27
SMG7-213ENST00000507691 CC2D2AQ9P2K1 1620 aa35.46■■■■□ 3.27
SMG7-213ENST00000507691 CECR2Q9BXF3 1484 aa35.41■■■■□ 3.26
SMG7-213ENST00000507691 EIF4G1Q04637 1599 aaKnown RBP35.33■■■■□ 3.25
SMG7-213ENST00000507691 DNAJC5Q9H3Z4 198 aa34.28■■■■□ 3.08
SMG7-213ENST00000507691 NCAPD3P42695 1498 aa34.16■■■■□ 3.06
SMG7-213ENST00000507691 CUX2O14529 1486 aa34.02■■■■□ 3.04
SMG7-213ENST00000507691 ATAD2BQ9ULI0 1458 aa33.98■■■■□ 3.03
SMG7-213ENST00000507691 ERCC6Q03468 1493 aa33.92■■■■□ 3.02
SMG7-213ENST00000507691 SMARCA2P51531 1590 aa33.89■■■■□ 3.02
SMG7-213ENST00000507691 HMGXB3Q12766 1538 aa33.89■■■■□ 3.02
SMG7-213ENST00000507691 SMARCA4P51532 1647 aa33.86■■■■□ 3.01
SMG7-213ENST00000507691 BAZ1AQ9NRL2 1556 aaPredicted RBP33.68■■■□□ 2.98
SMG7-213ENST00000507691 BAZ1BQ9UIG0 1483 aaKnown RBP33.63■■■□□ 2.97
SMG7-213ENST00000507691 NESP48681 1621 aa33.61■■■□□ 2.97
SMG7-213ENST00000507691 PEG3Q9GZU2 1588 aa33.6■■■□□ 2.97
SMG7-213ENST00000507691 LAMC3Q9Y6N6 1575 aa33.42■■■□□ 2.94
SMG7-213ENST00000507691 THOC2Q8NI27 1593 aaKnown RBP33.38■■■□□ 2.93
SMG7-213ENST00000507691 MROH2BQ7Z745 1585 aa33.36■■■□□ 2.93
SMG7-213ENST00000507691 PDS5BQ9NTI5 1447 aa33.24■■■□□ 2.91
SMG7-213ENST00000507691 KIF21AQ7Z4S6 1674 aa33.17■■■□□ 2.9
SMG7-213ENST00000507691 CADPSQ9ULU8 1353 aa33.09■■■□□ 2.89
SMG7-213ENST00000507691 MRC2Q9UBG0 1479 aa32.94■■■□□ 2.86
SMG7-213ENST00000507691 WIZO95785 1651 aa32.92■■■□□ 2.86
SMG7-213ENST00000507691 WDR62O43379 1518 aa32.89■■■□□ 2.86
SMG7-213ENST00000507691 CEP164Q9UPV0 1460 aa32.75■■■□□ 2.83
SMG7-213ENST00000507691 FANCD2Q9BXW9 1451 aa32.68■■■□□ 2.82
SMG7-213ENST00000507691 CFTRP13569 1480 aa32.67■■■□□ 2.82
SMG7-213ENST00000507691 RSF1Q96T23 1441 aaPredicted RBP32.6■■■□□ 2.81
SMG7-213ENST00000507691 TRIM41Q8WV44 630 aa32.56■■■□□ 2.8
SMG7-213ENST00000507691 TOP2AP11388 1531 aaKnown RBP32.55■■■□□ 2.8
SMG7-213ENST00000507691 URB2Q14146 1524 aaKnown RBP32.43■■■□□ 2.78
SMG7-213ENST00000507691 OSCARQ8IYS5 282 aa32.38■■■□□ 2.77
SMG7-213ENST00000507691 PRDM2Q13029 1718 aa32.28■■■□□ 2.76
SMG7-213ENST00000507691 CCDC88BA6NC98 1476 aa32.16■■■□□ 2.74
SMG7-213ENST00000507691 IFT140Q96RY7 1462 aa32.13■■■□□ 2.73
SMG7-213ENST00000507691 ZNF608Q9ULD9 1512 aaPredicted RBP32.05■■■□□ 2.72
SMG7-213ENST00000507691 TOPBP1Q92547 1522 aa32.04■■■□□ 2.72
SMG7-213ENST00000507691 ABCC8Q09428 1581 aa32.01■■■□□ 2.71
SMG7-213ENST00000507691 RIMBP3CA6NJZ7 1639 aa31.96■■■□□ 2.71
SMG7-213ENST00000507691 RIMBP3BA6NNM3 1639 aa31.96■■■□□ 2.71
SMG7-213ENST00000507691 RIMBP3Q9UFD9 1639 aa31.96■■■□□ 2.71
SMG7-213ENST00000507691 DNMBPQ6XZF7 1577 aa31.9■■■□□ 2.7
SMG7-213ENST00000507691 EIF4G3O43432 1585 aaKnown RBP31.87■■■□□ 2.69
SMG7-213ENST00000507691 ARHGEF11O15085 1522 aa31.85■■■□□ 2.69
SMG7-213ENST00000507691 TARBP1Q13395 1621 aaKnown RBP31.78■■■□□ 2.68
SMG7-213ENST00000507691 AQRO60306 1485 aaKnown RBP eCLIP31.72■■■□□ 2.671e-6■■■■■ 35
SMG7-213ENST00000507691 POLA1P09884 1462 aaPredicted RBP31.69■■■□□ 2.66
SMG7-213ENST00000507691 CHD1O14646 1710 aa31.66■■■□□ 2.66
SMG7-213ENST00000507691 CYB5RLQ6IPT4 315 aa31.59■■■□□ 2.65
SMG7-213ENST00000507691 RAD54L2Q9Y4B4 1467 aa31.54■■■□□ 2.64
SMG7-213ENST00000507691 SOGA1O94964 1423 aa31.53■■■□□ 2.64
SMG7-213ENST00000507691 FBLN2P98095 1184 aa31.53■■■□□ 2.64
SMG7-213ENST00000507691 ARAP1Q96P48 1450 aa31.52■■■□□ 2.64
SMG7-213ENST00000507691 WDR97A6NE52 1622 aa31.51■■■□□ 2.63
SMG7-213ENST00000507691 TDRD9Q8NDG6 1382 aaKnown RBP31.48■■■□□ 2.63
SMG7-213ENST00000507691 FGD5Q6ZNL6 1462 aa31.44■■■□□ 2.62
SMG7-213ENST00000507691 SNAPC4Q5SXM2 1469 aa31.4■■■□□ 2.62
SMG7-213ENST00000507691 MAGI1Q96QZ7 1491 aaPredicted RBP31.37■■■□□ 2.61
SMG7-213ENST00000507691 CUX1P39880 1505 aa31.37■■■□□ 2.61
SMG7-213ENST00000507691 CLASP1Q7Z460 1538 aa31.35■■■□□ 2.61
SMG7-213ENST00000507691 GRIN2BQ13224 1484 aa31.32■■■□□ 2.6
SMG7-213ENST00000507691 TRHP20396 242 aaPredicted RBP31.31■■■□□ 2.6
SMG7-213ENST00000507691 CHMP7Q8WUX9 453 aaPredicted RBP31.31■■■□□ 2.6
SMG7-213ENST00000507691 SYNJ1O43426 1573 aa31.3■■■□□ 2.6
SMG7-213ENST00000507691 SYNJ2O15056 1496 aa31.25■■■□□ 2.59
SMG7-213ENST00000507691 GAPVD1Q14C86 1478 aa31.16■■■□□ 2.58
SMG7-213ENST00000507691 PBRM1Q86U86 1689 aa31.13■■■□□ 2.57
SMG7-213ENST00000507691 ABCA10Q8WWZ4 1543 aa31.12■■■□□ 2.57
SMG7-213ENST00000507691 ABCA5Q8WWZ7 1642 aa31.07■■■□□ 2.56
SMG7-213ENST00000507691 WRNQ14191 1432 aaPredicted RBP eCLIP30.92■■■□□ 2.54
SMG7-213ENST00000507691 GRIN2AQ12879 1464 aa30.9■■■□□ 2.54
SMG7-213ENST00000507691 SUPT5HO00267 1087 aaKnown RBP30.89■■■□□ 2.54
SMG7-213ENST00000507691 ADAMTS12P58397 1594 aa30.84■■■□□ 2.53
SMG7-213ENST00000507691 NUP160Q12769 1436 aa30.84■■■□□ 2.53
SMG7-213ENST00000507691 TOP2BQ02880 1626 aa30.81■■■□□ 2.52
SMG7-213ENST00000507691 BIVM-ERCC5R4GMW8 1640 aa30.81■■■□□ 2.52
SMG7-213ENST00000507691 CEP170Q5SW79 1584 aa30.78■■■□□ 2.52
SMG7-213ENST00000507691 ERCC6L2Q5T890 1561 aa30.78■■■□□ 2.52
SMG7-213ENST00000507691 FHAD1B1AJZ9 1412 aa30.77■■■□□ 2.52
SMG7-213ENST00000507691 SHROOM2Q13796 1616 aa30.73■■■□□ 2.51
SMG7-213ENST00000507691 ERICH3Q5RHP9 1530 aa30.73■■■□□ 2.51
SMG7-213ENST00000507691 AEBP2Q6ZN18 517 aaPredicted RBP30.61■■■□□ 2.49
SMG7-213ENST00000507691 PRG4Q92954 1404 aaPredicted RBP30.52■■■□□ 2.48
SMG7-213ENST00000507691 JPH4Q96JJ6 628 aa30.49■■■□□ 2.47
SMG7-213ENST00000507691 RUSC2Q8N2Y8 1516 aa30.42■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms