RNA–Protein interactions for RNA: ENST00000419169.5

SMG7-204, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 2

Gene SMG7, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-204ENST00000419169 NISCHQ9Y2I1 1504 aa35.76■■■■□ 3.32
SMG7-204ENST00000419169 SHROOM4Q9ULL8 1493 aa30.61■■■□□ 2.49
SMG7-204ENST00000419169 CCDC180Q9P1Z9 1646 aa30.35■■■□□ 2.45
SMG7-204ENST00000419169 ZCCHC6Q5VYS8 1495 aaKnown RBP30.31■■■□□ 2.44
SMG7-204ENST00000419169 SUPT5HO00267 1087 aaKnown RBP30.07■■■□□ 2.4
SMG7-204ENST00000419169 DCAF8L2P0C7V8 631 aa29.74■■■□□ 2.35
SMG7-204ENST00000419169 DCAF1Q9Y4B6 1507 aa29.38■■■□□ 2.29
SMG7-204ENST00000419169 CHIC1Q5VXU3 224 aa29.37■■■□□ 2.29
SMG7-204ENST00000419169 MYO15BQ96JP2 1530 aa29.33■■■□□ 2.29
SMG7-204ENST00000419169 HRCP23327 699 aa28.83■■■□□ 2.21
SMG7-204ENST00000419169 ABCC9O60706 1549 aa28.65■■■□□ 2.18
SMG7-204ENST00000419169 PCGF6Q9BYE7 350 aa28.65■■■□□ 2.18
SMG7-204ENST00000419169 LOC105371045A0A1W2PR82 267 aa28.48■■■□□ 2.15
SMG7-204ENST00000419169 SCRIBQ14160 1630 aa28.43■■■□□ 2.14
SMG7-204ENST00000419169 RSF1Q96T23 1441 aaPredicted RBP28.37■■■□□ 2.13
SMG7-204ENST00000419169 PPARGC1BQ86YN6 1023 aaKnown RBP28.15■■■□□ 2.1
SMG7-204ENST00000419169 RB1CC1Q8TDY2 1594 aa28.12■■■□□ 2.09
SMG7-204ENST00000419169 TRIM26Q12899 539 aaPredicted RBP28.09■■■□□ 2.09
SMG7-204ENST00000419169 TRIM41Q8WV44 630 aa28.01■■■□□ 2.08
SMG7-204ENST00000419169 NACADO15069 1562 aa27.99■■■□□ 2.07
SMG7-204ENST00000419169 CECR2Q9BXF3 1484 aa27.86■■■□□ 2.05
SMG7-204ENST00000419169 FAM9AQ8IZU1 332 aaPredicted RBP27.83■■■□□ 2.05
SMG7-204ENST00000419169 MROH2BQ7Z745 1585 aa27.8■■■□□ 2.04
SMG7-204ENST00000419169 EHMT2Q96KQ7 1210 aa27.7■■■□□ 2.02
SMG7-204ENST00000419169 WIZO95785 1651 aa27.68■■■□□ 2.02
SMG7-204ENST00000419169 ZEB1P37275 1124 aaPredicted RBP27.58■■■□□ 2.01
SMG7-204ENST00000419169 BAZ1AQ9NRL2 1556 aaPredicted RBP27.54■■■□□ 2
SMG7-204ENST00000419169 EIF4G1Q04637 1599 aaKnown RBP27.43■■□□□ 1.98
SMG7-204ENST00000419169 TOP2AP11388 1531 aaKnown RBP27.25■■□□□ 1.95
SMG7-204ENST00000419169 UNC13AQ9UPW8 1703 aa27.22■■□□□ 1.95
SMG7-204ENST00000419169 SMARCA4P51532 1647 aa27.21■■□□□ 1.95
SMG7-204ENST00000419169 CCDC88BA6NC98 1476 aa27.12■■□□□ 1.93
SMG7-204ENST00000419169 ABCC8Q09428 1581 aa27.12■■□□□ 1.93
SMG7-204ENST00000419169 SMARCA2P51531 1590 aa27.11■■□□□ 1.93
SMG7-204ENST00000419169 WRNQ14191 1432 aaPredicted RBP eCLIP26.95■■□□□ 1.9
SMG7-204ENST00000419169 PABPN1Q86U42 306 aaKnown RBP eCLIP26.93■■□□□ 1.9
SMG7-204ENST00000419169 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.9■■□□□ 1.9
SMG7-204ENST00000419169 SOGA1O94964 1423 aa26.9■■□□□ 1.9
SMG7-204ENST00000419169 CEP162Q5TB80 1403 aa26.89■■□□□ 1.89
SMG7-204ENST00000419169 BICRAQ9NZM4 1560 aa26.88■■□□□ 1.89
SMG7-204ENST00000419169 CCER1Q8TC90 406 aaPredicted RBP26.84■■□□□ 1.89
SMG7-204ENST00000419169 TNIKQ9UKE5 1360 aa26.84■■□□□ 1.89
SMG7-204ENST00000419169 EEA1Q15075 1411 aa26.84■■□□□ 1.89
SMG7-204ENST00000419169 TTBK1Q5TCY1 1321 aaPredicted RBP26.8■■□□□ 1.88
SMG7-204ENST00000419169 CSRNP3Q8WYN3 585 aa26.76■■□□□ 1.87
SMG7-204ENST00000419169 RUSC2Q8N2Y8 1516 aa26.75■■□□□ 1.87
SMG7-204ENST00000419169 PEG3Q9GZU2 1588 aa26.69■■□□□ 1.86
SMG7-204ENST00000419169 SCAF1Q9H7N4 1312 aaKnown RBP26.66■■□□□ 1.86
SMG7-204ENST00000419169 GOLGA3Q08378 1498 aa26.66■■□□□ 1.86
SMG7-204ENST00000419169 UBTFP17480 764 aaKnown RBP26.65■■□□□ 1.86
SMG7-204ENST00000419169 SYNJ1O43426 1573 aa26.52■■□□□ 1.84
SMG7-204ENST00000419169 CEP164Q9UPV0 1460 aa26.49■■□□□ 1.83
SMG7-204ENST00000419169 KIF21BO75037 1637 aa26.47■■□□□ 1.83
SMG7-204ENST00000419169 DIEXFQ68CQ4 756 aaKnown RBP26.45■■□□□ 1.82
SMG7-204ENST00000419169 ATAD2BQ9ULI0 1458 aa26.44■■□□□ 1.82
SMG7-204ENST00000419169 PELP1Q8IZL8 1130 aaKnown RBP26.38■■□□□ 1.81
SMG7-204ENST00000419169 BAZ1BQ9UIG0 1483 aaKnown RBP26.38■■□□□ 1.81
SMG7-204ENST00000419169 ACIN1Q9UKV3 1341 aaKnown RBP26.37■■□□□ 1.81
SMG7-204ENST00000419169 CLIP1P30622 1438 aa26.34■■□□□ 1.81
SMG7-204ENST00000419169 NEUROD1Q13562 356 aa26.3■■□□□ 1.8
SMG7-204ENST00000419169 VPS8Q8N3P4 1428 aa26.27■■□□□ 1.8
SMG7-204ENST00000419169 RAPGEF2Q9Y4G8 1499 aa26.24■■□□□ 1.79
SMG7-204ENST00000419169 RANGAP1P46060 587 aaPredicted RBP26.21■■□□□ 1.79
SMG7-204ENST00000419169 ZNF316A6NFI3 1004 aaPredicted RBP26.21■■□□□ 1.79
SMG7-204ENST00000419169 TOP2BQ02880 1626 aa26.2■■□□□ 1.78
SMG7-204ENST00000419169 CENPBP07199 599 aaPredicted RBP26.2■■□□□ 1.78
SMG7-204ENST00000419169 HNRNPUL2Q1KMD3 747 aaKnown RBP26.17■■□□□ 1.78
SMG7-204ENST00000419169 APLP2Q06481 763 aa26.11■■□□□ 1.77
SMG7-204ENST00000419169 BIVM-ERCC5R4GMW8 1640 aa26.1■■□□□ 1.77
SMG7-204ENST00000419169 GTF3C3Q9Y5Q9 886 aa26.05■■□□□ 1.76
SMG7-204ENST00000419169 ERICH3Q5RHP9 1530 aa26.01■■□□□ 1.76
SMG7-204ENST00000419169 PRXQ9BXM0 1461 aa25.98■■□□□ 1.75
SMG7-204ENST00000419169 HMGXB3Q12766 1538 aa25.92■■□□□ 1.74
SMG7-204ENST00000419169 ARAP1Q96P48 1450 aa25.91■■□□□ 1.74
SMG7-204ENST00000419169 NCAPD3P42695 1498 aa25.89■■□□□ 1.74
SMG7-204ENST00000419169 CUX1P39880 1505 aa25.88■■□□□ 1.73
SMG7-204ENST00000419169 MIER1Q8N108 512 aa25.84■■□□□ 1.73
SMG7-204ENST00000419169 KIF27Q86VH2 1401 aa25.8■■□□□ 1.72
SMG7-204ENST00000419169 YTHDC1Q96MU7 727 aaKnown RBP25.79■■□□□ 1.72
SMG7-204ENST00000419169 CLSPNQ9HAW4 1339 aa25.78■■□□□ 1.72
SMG7-204ENST00000419169 KANK4Q5T7N3 995 aaPredicted RBP25.76■■□□□ 1.71
SMG7-204ENST00000419169 CFTRP13569 1480 aa25.75■■□□□ 1.71
SMG7-204ENST00000419169 DHX57Q6P158 1386 aaKnown RBP25.75■■□□□ 1.71
SMG7-204ENST00000419169 RRBP1Q9P2E9 1410 aaKnown RBP25.7■■□□□ 1.7
SMG7-204ENST00000419169 ARHGAP35Q9NRY4 1499 aa25.65■■□□□ 1.7
SMG7-204ENST00000419169 CUX2O14529 1486 aa25.59■■□□□ 1.69
SMG7-204ENST00000419169 PRDM2Q13029 1718 aa25.59■■□□□ 1.69
SMG7-204ENST00000419169 CCNB3Q8WWL7 1395 aa25.56■■□□□ 1.68
SMG7-204ENST00000419169 CC2D2AQ9P2K1 1620 aa25.5■■□□□ 1.67
SMG7-204ENST00000419169 IGF1RP08069 1367 aa25.49■■□□□ 1.67
SMG7-204ENST00000419169 ITGAEP38570 1179 aa25.44■■□□□ 1.66
SMG7-204ENST00000419169 TIAM1Q13009 1591 aa25.43■■□□□ 1.66
SMG7-204ENST00000419169 MAP3K1Q13233 1512 aa25.42■■□□□ 1.66
SMG7-204ENST00000419169 CADPSQ9ULU8 1353 aa25.4■■□□□ 1.66
SMG7-204ENST00000419169 CARMIL1Q5VZK9 1371 aa25.38■■□□□ 1.65
SMG7-204ENST00000419169 FGD5Q6ZNL6 1462 aa25.38■■□□□ 1.65
SMG7-204ENST00000419169 RAB3GAP2Q9H2M9 1393 aa25.35■■□□□ 1.65
SMG7-204ENST00000419169 LRRC9Q6ZRR7 1453 aa25.32■■□□□ 1.64
SMG7-204ENST00000419169 DNAJC5BQ9UF47 199 aa25.31■■□□□ 1.64
SMG7-204ENST00000419169 MAPKBP1O60336 1514 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms