Protein–RNA interactions for Protein: Q58A44

PCOTH, Prostate collagen triple helix protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCOTHQ58A44 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCOTHQ58A44 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCOTHQ58A44 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCOTHQ58A44 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCOTHQ58A44 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCOTHQ58A44 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCOTHQ58A44 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCOTHQ58A44 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCOTHQ58A44 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
PCOTHQ58A44 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC14.63□□□□□ -0.07
PCOTHQ58A44 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCOTHQ58A44 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCOTHQ58A44 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
PCOTHQ58A44 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PCOTHQ58A44 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC14.62□□□□□ -0.07
PCOTHQ58A44 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC14.62□□□□□ -0.07
PCOTHQ58A44 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCOTHQ58A44 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCOTHQ58A44 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PCOTHQ58A44 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCOTHQ58A44 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCOTHQ58A44 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
PCOTHQ58A44 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PCOTHQ58A44 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCOTHQ58A44 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCOTHQ58A44 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCOTHQ58A44 HNRNPLP2-201ENST00000568980 1570 ntBASIC14.6□□□□□ -0.07
PCOTHQ58A44 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC14.6□□□□□ -0.07
PCOTHQ58A44 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC14.6□□□□□ -0.07
PCOTHQ58A44 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
PCOTHQ58A44 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCOTHQ58A44 AP006261.1-201ENST00000584783 668 ntBASIC14.59□□□□□ -0.07
PCOTHQ58A44 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCOTHQ58A44 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCOTHQ58A44 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCOTHQ58A44 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCOTHQ58A44 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PCOTHQ58A44 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCOTHQ58A44 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PCOTHQ58A44 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
PCOTHQ58A44 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PCOTHQ58A44 AL162393.1-201ENST00000437852 946 ntBASIC14.58□□□□□ -0.08
PCOTHQ58A44 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC14.58□□□□□ -0.08
PCOTHQ58A44 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCOTHQ58A44 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCOTHQ58A44 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCOTHQ58A44 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCOTHQ58A44 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC14.58□□□□□ -0.08
PCOTHQ58A44 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PCOTHQ58A44 AL121749.1-202ENST00000609313 2153 ntBASIC14.57□□□□□ -0.08
PCOTHQ58A44 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC14.57□□□□□ -0.08
PCOTHQ58A44 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC14.57□□□□□ -0.08
PCOTHQ58A44 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCOTHQ58A44 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCOTHQ58A44 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCOTHQ58A44 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCOTHQ58A44 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCOTHQ58A44 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCOTHQ58A44 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCOTHQ58A44 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCOTHQ58A44 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCOTHQ58A44 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC14.56□□□□□ -0.08
PCOTHQ58A44 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
PCOTHQ58A44 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCOTHQ58A44 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC14.56□□□□□ -0.08
PCOTHQ58A44 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCOTHQ58A44 WASH5P-204ENST00000632292 975 ntBASIC14.56□□□□□ -0.08
PCOTHQ58A44 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC14.56□□□□□ -0.08
PCOTHQ58A44 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCOTHQ58A44 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCOTHQ58A44 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
PCOTHQ58A44 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
PCOTHQ58A44 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
PCOTHQ58A44 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
PCOTHQ58A44 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCOTHQ58A44 NRG1-221ENST00000614767 762 ntTSL 5 BASIC14.55□□□□□ -0.08
PCOTHQ58A44 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCOTHQ58A44 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCOTHQ58A44 ST7-AS1-201ENST00000456775 1889 ntBASIC14.55□□□□□ -0.08
PCOTHQ58A44 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PCOTHQ58A44 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
PCOTHQ58A44 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCOTHQ58A44 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
PCOTHQ58A44 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCOTHQ58A44 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCOTHQ58A44 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCOTHQ58A44 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCOTHQ58A44 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCOTHQ58A44 MIR762-201ENST00000390236 83 ntBASIC14.53□□□□□ -0.08
PCOTHQ58A44 MIR3665-201ENST00000578708 105 ntBASIC14.53□□□□□ -0.08
PCOTHQ58A44 CHML-205ENST00000638160 705 ntTSL 3 BASIC14.53□□□□□ -0.08
PCOTHQ58A44 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCOTHQ58A44 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PCOTHQ58A44 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCOTHQ58A44 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCOTHQ58A44 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
PCOTHQ58A44 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC14.52□□□□□ -0.09
PCOTHQ58A44 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCOTHQ58A44 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCOTHQ58A44 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms