RNA–Protein interactions for RNA: ENST00000361125.1

SMURF1-201, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene SMURF1, Length 5,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-201ENST00000361125 DCAF8L2P0C7V8 631 aa37.15■■■■□ 3.54
SMURF1-201ENST00000361125 NISCHQ9Y2I1 1504 aa35.57■■■■□ 3.28
SMURF1-201ENST00000361125 SUPT5HO00267 1087 aaKnown RBP35.19■■■■□ 3.22
SMURF1-201ENST00000361125 SHROOM4Q9ULL8 1493 aa34.79■■■■□ 3.16
SMURF1-201ENST00000361125 EHMT2Q96KQ7 1210 aa34.24■■■■□ 3.07
SMURF1-201ENST00000361125 FAM9AQ8IZU1 332 aaPredicted RBP33.24■■■□□ 2.91
SMURF1-201ENST00000361125 APLP2Q06481 763 aa33.18■■■□□ 2.9
SMURF1-201ENST00000361125 TTBK1Q5TCY1 1321 aaPredicted RBP33.02■■■□□ 2.88
SMURF1-201ENST00000361125 PCGF6Q9BYE7 350 aa32.75■■■□□ 2.83
SMURF1-201ENST00000361125 RANGAP1P46060 587 aaPredicted RBP32.73■■■□□ 2.83
SMURF1-201ENST00000361125 PELP1Q8IZL8 1130 aaKnown RBP32.52■■■□□ 2.8
SMURF1-201ENST00000361125 TRIM41Q8WV44 630 aa32.51■■■□□ 2.79
SMURF1-201ENST00000361125 ATP1B4Q9UN42 357 aaPredicted RBP32.33■■■□□ 2.77
SMURF1-201ENST00000361125 UBTFP17480 764 aaKnown RBP32.14■■■□□ 2.74
SMURF1-201ENST00000361125 CCER1Q8TC90 406 aaPredicted RBP32.07■■■□□ 2.72
SMURF1-201ENST00000361125 ZEB1P37275 1124 aaPredicted RBP32.04■■■□□ 2.72
SMURF1-201ENST00000361125 PPARGC1BQ86YN6 1023 aaKnown RBP31.8■■■□□ 2.68
SMURF1-201ENST00000361125 CENPBP07199 599 aaPredicted RBP31.74■■■□□ 2.67
SMURF1-201ENST00000361125 HRCP23327 699 aa31.55■■■□□ 2.64
SMURF1-201ENST00000361125 TRIM26Q12899 539 aaPredicted RBP31.44■■■□□ 2.62
SMURF1-201ENST00000361125 YTHDC1Q96MU7 727 aaKnown RBP31.41■■■□□ 2.62
SMURF1-201ENST00000361125 ERICH6Q7L0X2 663 aa31.34■■■□□ 2.61
SMURF1-201ENST00000361125 CHIC1Q5VXU3 224 aa31.31■■■□□ 2.6
SMURF1-201ENST00000361125 LOC105371045A0A1W2PR82 267 aa31.23■■■□□ 2.59
SMURF1-201ENST00000361125 ITGAEP38570 1179 aa31.22■■■□□ 2.59
SMURF1-201ENST00000361125 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.15■■■□□ 2.58
SMURF1-201ENST00000361125 HNRNPUL2Q1KMD3 747 aaKnown RBP31.15■■■□□ 2.58
SMURF1-201ENST00000361125 NEFLP07196 543 aa31.07■■■□□ 2.56
SMURF1-201ENST00000361125 MYT1LQ9UL68 1186 aa31.03■■■□□ 2.56
SMURF1-201ENST00000361125 POLR3GLQ9BT43 218 aa30.87■■■□□ 2.53
SMURF1-201ENST00000361125 ABCC9O60706 1549 aa30.87■■■□□ 2.53
SMURF1-201ENST00000361125 PABPN1Q86U42 306 aaKnown RBP eCLIP30.83■■■□□ 2.532e-6■■■■□ 23
SMURF1-201ENST00000361125 MYT1Q01538 1121 aa30.76■■■□□ 2.52
SMURF1-201ENST00000361125 CNGB1Q14028 1251 aaPredicted RBP30.65■■■□□ 2.5
SMURF1-201ENST00000361125 FAM50AQ14320 339 aaKnown RBP30.4■■■□□ 2.46
SMURF1-201ENST00000361125 DIEXFQ68CQ4 756 aaKnown RBP30.3■■■□□ 2.44
SMURF1-201ENST00000361125 SLC4A1APQ9BWU0 796 aaKnown RBP30.29■■■□□ 2.44
SMURF1-201ENST00000361125 TRIM52Q96A61 297 aa30.19■■■□□ 2.42
SMURF1-201ENST00000361125 DAXXQ9UER7 740 aaPredicted RBP30.12■■■□□ 2.41
SMURF1-201ENST00000361125 NEUROD1Q13562 356 aa30.12■■■□□ 2.41
SMURF1-201ENST00000361125 FBLN2P98095 1184 aa30.05■■■□□ 2.4
SMURF1-201ENST00000361125 ZNF326Q5BKZ1 582 aaKnown RBP29.87■■■□□ 2.37
SMURF1-201ENST00000361125 P3H3Q8IVL6 736 aa29.86■■■□□ 2.37
SMURF1-201ENST00000361125 GTF3C3Q9Y5Q9 886 aa29.86■■■□□ 2.37
SMURF1-201ENST00000361125 ARID3CA6NKF2 412 aa29.83■■■□□ 2.37
SMURF1-201ENST00000361125 SCRIBQ14160 1630 aa29.73■■■□□ 2.35
SMURF1-201ENST00000361125 CLSPNQ9HAW4 1339 aa29.67■■■□□ 2.34
SMURF1-201ENST00000361125 CSRNP3Q8WYN3 585 aa29.65■■■□□ 2.34
SMURF1-201ENST00000361125 DCAF1Q9Y4B6 1507 aa29.63■■■□□ 2.33
SMURF1-201ENST00000361125 ZNF316A6NFI3 1004 aaPredicted RBP29.63■■■□□ 2.33
SMURF1-201ENST00000361125 ZCCHC6Q5VYS8 1495 aaKnown RBP29.63■■■□□ 2.33
SMURF1-201ENST00000361125 ACIN1Q9UKV3 1341 aaKnown RBP29.57■■■□□ 2.32
SMURF1-201ENST00000361125 BCANQ96GW7 911 aa29.57■■■□□ 2.32
SMURF1-201ENST00000361125 ANP32CO43423 234 aa29.57■■■□□ 2.32
SMURF1-201ENST00000361125 ZNF777Q9ULD5 760 aaPredicted RBP29.51■■■□□ 2.31
SMURF1-201ENST00000361125 RTL5Q5HYW3 569 aaPredicted RBP29.31■■■□□ 2.28
SMURF1-201ENST00000361125 MYO15BQ96JP2 1530 aa29.27■■■□□ 2.28
SMURF1-201ENST00000361125 SLC24A1O60721 1099 aa29.22■■■□□ 2.27
SMURF1-201ENST00000361125 CDK11AQ9UQ88 783 aaPredicted RBP29.2■■■□□ 2.26
SMURF1-201ENST00000361125 BCL11AQ9H165 835 aa29.18■■■□□ 2.26
SMURF1-201ENST00000361125 CANXP27824 592 aaKnown RBP29.15■■■□□ 2.26
SMURF1-201ENST00000361125 ZBTB47Q9UFB7 747 aaPredicted RBP29.09■■■□□ 2.25
SMURF1-201ENST00000361125 CCDC180Q9P1Z9 1646 aa29.06■■■□□ 2.24
SMURF1-201ENST00000361125 CHGAP10645 457 aaKnown RBP29■■■□□ 2.23
SMURF1-201ENST00000361125 NEFMP07197 916 aa29■■■□□ 2.23
SMURF1-201ENST00000361125 CHIC2Q9UKJ5 165 aa28.97■■■□□ 2.23
SMURF1-201ENST00000361125 TONSLQ96HA7 1378 aa28.97■■■□□ 2.23
SMURF1-201ENST00000361125 PLPPR3Q6T4P5 718 aa28.96■■■□□ 2.23
SMURF1-201ENST00000361125 SCAF1Q9H7N4 1312 aaKnown RBP28.94■■■□□ 2.22
SMURF1-201ENST00000361125 ESF1Q9H501 851 aaKnown RBP28.92■■■□□ 2.22
SMURF1-201ENST00000361125 STAG3Q9UJ98 1225 aa28.87■■■□□ 2.21
SMURF1-201ENST00000361125 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.85■■■□□ 2.21
SMURF1-201ENST00000361125 NPM1P06748 294 aaKnown RBP eCLIP28.83■■■□□ 2.21
SMURF1-201ENST00000361125 DDX10Q13206 875 aaKnown RBP28.79■■■□□ 2.2
SMURF1-201ENST00000361125 FKBP8Q14318 412 aa28.74■■■□□ 2.19
SMURF1-201ENST00000361125 FAM9BQ8IZU0 186 aa28.72■■■□□ 2.19
SMURF1-201ENST00000361125 RB1CC1Q8TDY2 1594 aa28.72■■■□□ 2.19
SMURF1-201ENST00000361125 CHMP7Q8WUX9 453 aaPredicted RBP28.71■■■□□ 2.19
SMURF1-201ENST00000361125 NPM2Q86SE8 214 aaKnown RBP28.68■■■□□ 2.18
SMURF1-201ENST00000361125 SALL2Q9Y467 1007 aaPredicted RBP28.67■■■□□ 2.18
SMURF1-201ENST00000361125 MTUS2Q5JR59 1369 aa28.67■■■□□ 2.18
SMURF1-201ENST00000361125 HNRNPUQ00839 825 aaKnown RBP eCLIP28.67■■■□□ 2.18
SMURF1-201ENST00000361125 RSF1Q96T23 1441 aaPredicted RBP28.65■■■□□ 2.18
SMURF1-201ENST00000361125 MIER1Q8N108 512 aa28.65■■■□□ 2.18
SMURF1-201ENST00000361125 KDM2AQ9Y2K7 1162 aa28.65■■■□□ 2.18
SMURF1-201ENST00000361125 CLIP1P30622 1438 aa28.63■■■□□ 2.17
SMURF1-201ENST00000361125 TSPY4P0CV99 314 aa28.59■■■□□ 2.17
SMURF1-201ENST00000361125 TSPY10P0CW01 314 aa28.59■■■□□ 2.17
SMURF1-201ENST00000361125 ANP32AP39687 249 aaKnown RBP28.58■■■□□ 2.17
SMURF1-201ENST00000361125 HIRIP3Q9BW71 556 aaPredicted RBP28.54■■■□□ 2.16
SMURF1-201ENST00000361125 RRP7BPQ9NSQ0 103 aa28.52■■■□□ 2.16
SMURF1-201ENST00000361125 CEP162Q5TB80 1403 aa28.5■■■□□ 2.15
SMURF1-201ENST00000361125 SENP3Q9H4L4 574 aaPredicted RBP28.48■■■□□ 2.15
SMURF1-201ENST00000361125 TMC1Q8TDI8 760 aa28.47■■■□□ 2.15
SMURF1-201ENST00000361125 KCNH8Q96L42 1107 aa28.45■■■□□ 2.15
SMURF1-201ENST00000361125 GOLGA3Q08378 1498 aa28.42■■■□□ 2.14
SMURF1-201ENST00000361125 BAZ1BQ9UIG0 1483 aaKnown RBP28.4■■■□□ 2.14
SMURF1-201ENST00000361125 WDR43Q15061 677 aaKnown RBP eCLIP28.36■■■□□ 2.13
SMURF1-201ENST00000361125 WRNQ14191 1432 aaPredicted RBP eCLIP28.36■■■□□ 2.132e-8■■■■■ 75.2
SMURF1-201ENST00000361125 MRS2Q9HD23 443 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms