Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
LINC01554Q52M75 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01554Q52M75 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01554Q52M75 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC01554Q52M75 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01554Q52M75 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
LINC01554Q52M75 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
LINC01554Q52M75 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01554Q52M75 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01554Q52M75 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01554Q52M75 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC01554Q52M75 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01554Q52M75 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01554Q52M75 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01554Q52M75 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LINC01554Q52M75 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LINC01554Q52M75 RNF165-205ENST00000588679 2904 ntBASIC12.77□□□□□ -0.36
LINC01554Q52M75 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01554Q52M75 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
LINC01554Q52M75 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01554Q52M75 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01554Q52M75 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01554Q52M75 INO80B-203ENST00000409917 796 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC01554Q52M75 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01554Q52M75 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01554Q52M75 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01554Q52M75 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01554Q52M75 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01554Q52M75 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01554Q52M75 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01554Q52M75 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01554Q52M75 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01554Q52M75 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC12.75□□□□□ -0.37
LINC01554Q52M75 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01554Q52M75 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
LINC01554Q52M75 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01554Q52M75 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01554Q52M75 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01554Q52M75 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01554Q52M75 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01554Q52M75 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01554Q52M75 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01554Q52M75 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01554Q52M75 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01554Q52M75 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01554Q52M75 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01554Q52M75 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01554Q52M75 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01554Q52M75 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01554Q52M75 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01554Q52M75 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01554Q52M75 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC12.73□□□□□ -0.37
LINC01554Q52M75 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01554Q52M75 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01554Q52M75 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
LINC01554Q52M75 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC01554Q52M75 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01554Q52M75 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01554Q52M75 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01554Q52M75 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
LINC01554Q52M75 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC12.71□□□□□ -0.38
LINC01554Q52M75 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01554Q52M75 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC01554Q52M75 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
LINC01554Q52M75 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01554Q52M75 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01554Q52M75 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01554Q52M75 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01554Q52M75 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01554Q52M75 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
LINC01554Q52M75 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01554Q52M75 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
LINC01554Q52M75 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01554Q52M75 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
LINC01554Q52M75 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC01554Q52M75 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01554Q52M75 AC138932.1-201ENST00000534164 6830 ntBASIC12.69□□□□□ -0.38
LINC01554Q52M75 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01554Q52M75 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01554Q52M75 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01554Q52M75 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC12.69□□□□□ -0.38
LINC01554Q52M75 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01554Q52M75 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01554Q52M75 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01554Q52M75 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01554Q52M75 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01554Q52M75 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01554Q52M75 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
LINC01554Q52M75 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
LINC01554Q52M75 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01554Q52M75 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC01554Q52M75 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC01554Q52M75 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01554Q52M75 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01554Q52M75 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01554Q52M75 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01554Q52M75 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
LINC01554Q52M75 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
LINC01554Q52M75 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01554Q52M75 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms