Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINC01554Q52M75 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LINC01554Q52M75 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC01554Q52M75 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LINC01554Q52M75 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
LINC01554Q52M75 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
LINC01554Q52M75 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC01554Q52M75 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINC01554Q52M75 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC01554Q52M75 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01554Q52M75 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LINC01554Q52M75 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC01554Q52M75 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
LINC01554Q52M75 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
LINC01554Q52M75 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC15.96■□□□□ 0.15
LINC01554Q52M75 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC01554Q52M75 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC15.88■□□□□ 0.13
LINC01554Q52M75 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC15.83■□□□□ 0.12
LINC01554Q52M75 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LINC01554Q52M75 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC01554Q52M75 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01554Q52M75 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
LINC01554Q52M75 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC01554Q52M75 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC01554Q52M75 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC01554Q52M75 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LINC01554Q52M75 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01554Q52M75 AL161658.1-201ENST00000623641 1967 ntBASIC15.63■□□□□ 0.09
LINC01554Q52M75 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
LINC01554Q52M75 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LINC01554Q52M75 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LINC01554Q52M75 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC01554Q52M75 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINC01554Q52M75 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LINC01554Q52M75 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LINC01554Q52M75 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
LINC01554Q52M75 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
LINC01554Q52M75 AC139426.1-201ENST00000568218 2529 ntBASIC15.36■□□□□ 0.05
LINC01554Q52M75 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC15.32■□□□□ 0.04
LINC01554Q52M75 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01554Q52M75 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC01554Q52M75 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINC01554Q52M75 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
LINC01554Q52M75 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC01554Q52M75 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC01554Q52M75 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01554Q52M75 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01554Q52M75 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01554Q52M75 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01554Q52M75 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC01554Q52M75 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0.01
LINC01554Q52M75 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
LINC01554Q52M75 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
LINC01554Q52M75 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LINC01554Q52M75 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01554Q52M75 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01554Q52M75 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC15□□□□□ -0.01
LINC01554Q52M75 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC01554Q52M75 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
LINC01554Q52M75 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01554Q52M75 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01554Q52M75 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01554Q52M75 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
LINC01554Q52M75 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01554Q52M75 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC14.93□□□□□ -0.02
LINC01554Q52M75 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01554Q52M75 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01554Q52M75 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01554Q52M75 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01554Q52M75 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01554Q52M75 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01554Q52M75 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01554Q52M75 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
LINC01554Q52M75 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01554Q52M75 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01554Q52M75 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01554Q52M75 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
LINC01554Q52M75 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LINC01554Q52M75 ST7-202ENST00000323984 2142 ntTSL 5 BASIC14.8□□□□□ -0.04
LINC01554Q52M75 ST7-207ENST00000393449 2127 ntTSL 5 BASIC14.8□□□□□ -0.04
LINC01554Q52M75 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01554Q52M75 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01554Q52M75 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
LINC01554Q52M75 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC14.77□□□□□ -0.05
LINC01554Q52M75 ST7-205ENST00000393446 2114 ntTSL 5 BASIC14.75□□□□□ -0.05
LINC01554Q52M75 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01554Q52M75 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
LINC01554Q52M75 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
LINC01554Q52M75 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01554Q52M75 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01554Q52M75 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC14.72□□□□□ -0.05
LINC01554Q52M75 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LINC01554Q52M75 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01554Q52M75 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
LINC01554Q52M75 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
LINC01554Q52M75 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01554Q52M75 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01554Q52M75 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
LINC01554Q52M75 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01554Q52M75 AL356512.1-201ENST00000607453 1739 ntBASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms