RNA–Protein interactions for RNA: ENST00000404826.6

SDK1-202, Transcript of sidekick cell adhesion molecule 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SDK1, Length 10,397 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDK1-202ENST00000404826 PELP1Q8IZL8 1130 aaKnown RBP30.4■■■□□ 2.46
SDK1-202ENST00000404826 MYT1Q01538 1121 aa29.77■■■□□ 2.36
SDK1-202ENST00000404826 CCER1Q8TC90 406 aaPredicted RBP28.79■■■□□ 2.2
SDK1-202ENST00000404826 ERICH6Q7L0X2 663 aa28.61■■■□□ 2.17
SDK1-202ENST00000404826 DCAF8L2P0C7V8 631 aa28.59■■■□□ 2.17
SDK1-202ENST00000404826 CENPBP07199 599 aaPredicted RBP28.17■■■□□ 2.1
SDK1-202ENST00000404826 YTHDC1Q96MU7 727 aaKnown RBP28.16■■■□□ 2.1
SDK1-202ENST00000404826 TTBK1Q5TCY1 1321 aaPredicted RBP27.95■■■□□ 2.06
SDK1-202ENST00000404826 SUPT5HO00267 1087 aaKnown RBP27.79■■■□□ 2.04
SDK1-202ENST00000404826 ZEB1P37275 1124 aaPredicted RBP27.52■■■□□ 2
SDK1-202ENST00000404826 NEFLP07196 543 aa27.49■■□□□ 1.99
SDK1-202ENST00000404826 APLP2Q06481 763 aa27.36■■□□□ 1.97
SDK1-202ENST00000404826 EHMT2Q96KQ7 1210 aa27.29■■□□□ 1.96
SDK1-202ENST00000404826 DAXXQ9UER7 740 aaPredicted RBP27.17■■□□□ 1.94
SDK1-202ENST00000404826 PCGF6Q9BYE7 350 aa27.08■■□□□ 1.93
SDK1-202ENST00000404826 SHROOM4Q9ULL8 1493 aa27.02■■□□□ 1.92
SDK1-202ENST00000404826 FAM9AQ8IZU1 332 aaPredicted RBP26.85■■□□□ 1.89
SDK1-202ENST00000404826 RTL5Q5HYW3 569 aaPredicted RBP26.74■■□□□ 1.87
SDK1-202ENST00000404826 ZNF316A6NFI3 1004 aaPredicted RBP26.4■■□□□ 1.82
SDK1-202ENST00000404826 GLIPR1L2Q4G1C9 344 aa26.36■■□□□ 1.81
SDK1-202ENST00000404826 NISCHQ9Y2I1 1504 aa26.34■■□□□ 1.81
SDK1-202ENST00000404826 RANGAP1P46060 587 aaPredicted RBP25.93■■□□□ 1.74
SDK1-202ENST00000404826 MYT1LQ9UL68 1186 aa25.8■■□□□ 1.72
SDK1-202ENST00000404826 HRCP23327 699 aa25.76■■□□□ 1.71
SDK1-202ENST00000404826 CLSPNQ9HAW4 1339 aa25.76■■□□□ 1.71
SDK1-202ENST00000404826 ATP1B4Q9UN42 357 aaPredicted RBP25.74■■□□□ 1.71
SDK1-202ENST00000404826 TRIM41Q8WV44 630 aa25.74■■□□□ 1.71
SDK1-202ENST00000404826 UBTFP17480 764 aaKnown RBP25.68■■□□□ 1.7
SDK1-202ENST00000404826 TRIM26Q12899 539 aaPredicted RBP25.62■■□□□ 1.69
SDK1-202ENST00000404826 ANP32BQ92688 251 aaKnown RBP25.56■■□□□ 1.68
SDK1-202ENST00000404826 EIF5BO60841 1220 aaKnown RBP25.51■■□□□ 1.67
SDK1-202ENST00000404826 CDK11AQ9UQ88 783 aaPredicted RBP25.45■■□□□ 1.67
SDK1-202ENST00000404826 POLR3GLQ9BT43 218 aa25.43■■□□□ 1.66
SDK1-202ENST00000404826 ANP32AP39687 249 aaKnown RBP25.35■■□□□ 1.65
SDK1-202ENST00000404826 PPARGC1BQ86YN6 1023 aaKnown RBP25.29■■□□□ 1.64
SDK1-202ENST00000404826 DIEXFQ68CQ4 756 aaKnown RBP25.26■■□□□ 1.63
SDK1-202ENST00000404826 ZBTB47Q9UFB7 747 aaPredicted RBP25.2■■□□□ 1.62
SDK1-202ENST00000404826 TNNT2P45379 298 aaPredicted RBP25.15■■□□□ 1.62
SDK1-202ENST00000404826 GTF3C3Q9Y5Q9 886 aa25.09■■□□□ 1.61
SDK1-202ENST00000404826 BCANQ96GW7 911 aa25.07■■□□□ 1.6
SDK1-202ENST00000404826 CNGB1Q14028 1251 aaPredicted RBP25.07■■□□□ 1.6
SDK1-202ENST00000404826 ITGAEP38570 1179 aa25.01■■□□□ 1.59
SDK1-202ENST00000404826 SLC4A1APQ9BWU0 796 aaKnown RBP24.92■■□□□ 1.58
SDK1-202ENST00000404826 HNRNPUL2Q1KMD3 747 aaKnown RBP24.87■■□□□ 1.57
SDK1-202ENST00000404826 HSP90AA1P07900 732 aaKnown RBP24.8■■□□□ 1.56
SDK1-202ENST00000404826 UPF2Q9HAU5 1272 aaKnown RBP24.8■■□□□ 1.56
SDK1-202ENST00000404826 TRIM44Q96DX7 344 aaPredicted RBP24.77■■□□□ 1.56
SDK1-202ENST00000404826 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.76■■□□□ 1.55
SDK1-202ENST00000404826 NEFMP07197 916 aa24.74■■□□□ 1.55
SDK1-202ENST00000404826 CANXP27824 592 aaKnown RBP24.73■■□□□ 1.55
SDK1-202ENST00000404826 ANP32CO43423 234 aa24.73■■□□□ 1.55
SDK1-202ENST00000404826 CDK11BP21127 795 aaKnown RBP24.69■■□□□ 1.54
SDK1-202ENST00000404826 NCLP19338 710 aaKnown RBP24.67■■□□□ 1.54
SDK1-202ENST00000404826 ANP32EQ9BTT0 268 aa24.66■■□□□ 1.54
SDK1-202ENST00000404826 ACIN1Q9UKV3 1341 aaKnown RBP24.59■■□□□ 1.53
SDK1-202ENST00000404826 NPM2Q86SE8 214 aaKnown RBP24.56■■□□□ 1.52
SDK1-202ENST00000404826 CHIC1Q5VXU3 224 aa24.53■■□□□ 1.52
SDK1-202ENST00000404826 BCL11AQ9H165 835 aa24.42■■□□□ 1.5
SDK1-202ENST00000404826 ERICH6BQ5W0A0 696 aa24.41■■□□□ 1.5
SDK1-202ENST00000404826 LOC105371045A0A1W2PR82 267 aa24.39■■□□□ 1.5
SDK1-202ENST00000404826 NBR1Q14596 966 aa24.35■■□□□ 1.49
SDK1-202ENST00000404826 FAM50AQ14320 339 aaKnown RBP24.32■■□□□ 1.48
SDK1-202ENST00000404826 NEUROD1Q13562 356 aa24.31■■□□□ 1.48
SDK1-202ENST00000404826 ZNF326Q5BKZ1 582 aaKnown RBP24.26■■□□□ 1.47
SDK1-202ENST00000404826 TRIM52Q96A61 297 aa24.21■■□□□ 1.47
SDK1-202ENST00000404826 DDRGK1Q96HY6 314 aa24.2■■□□□ 1.46
SDK1-202ENST00000404826 BECN1Q14457 450 aa24.19■■□□□ 1.46
SDK1-202ENST00000404826 GOLGA6L22H0YM25 854 aa24.19■■□□□ 1.46
SDK1-202ENST00000404826 ARXQ96QS3 562 aa24.19■■□□□ 1.46
SDK1-202ENST00000404826 SLC24A1O60721 1099 aa24.15■■□□□ 1.46
SDK1-202ENST00000404826 FKBP8Q14318 412 aa24.11■■□□□ 1.45
SDK1-202ENST00000404826 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.1■■□□□ 1.45
SDK1-202ENST00000404826 DNTTIP2Q5QJE6 756 aaKnown RBP24.03■■□□□ 1.44
SDK1-202ENST00000404826 NAP1L5Q96NT1 182 aaPredicted RBP24.02■■□□□ 1.44
SDK1-202ENST00000404826 CHAF1AQ13111 956 aaPredicted RBP24.01■■□□□ 1.43
SDK1-202ENST00000404826 CCDC136Q96JN2 1154 aa23.97■■□□□ 1.43
SDK1-202ENST00000404826 GOLGA6L6A8MZA4 724 aa23.96■■□□□ 1.43
SDK1-202ENST00000404826 PTMAP06454 111 aaKnown RBP23.96■■□□□ 1.43
SDK1-202ENST00000404826 ZRSR1Q15695 479 aaKnown RBP23.95■■□□□ 1.42
SDK1-202ENST00000404826 NRDCO43847 1150 aa23.91■■□□□ 1.42
SDK1-202ENST00000404826 PPM1GO15355 546 aaPredicted RBP23.85■■□□□ 1.41
SDK1-202ENST00000404826 MYH16Q9H6N6 1097 aa23.83■■□□□ 1.41
SDK1-202ENST00000404826 HNRNPUQ00839 825 aaKnown RBP eCLIP23.82■■□□□ 1.4
SDK1-202ENST00000404826 L1TD1Q5T7N2 865 aaKnown RBP23.76■■□□□ 1.39
SDK1-202ENST00000404826 PTMSP20962 102 aa23.73■■□□□ 1.39
SDK1-202ENST00000404826 SCAF1Q9H7N4 1312 aaKnown RBP23.73■■□□□ 1.39
SDK1-202ENST00000404826 TNNT3P45378 269 aaPredicted RBP23.72■■□□□ 1.39
SDK1-202ENST00000404826 CALRP27797 417 aaKnown RBP23.69■■□□□ 1.38
SDK1-202ENST00000404826 MSNP26038 577 aaKnown RBP23.68■■□□□ 1.38
SDK1-202ENST00000404826 TONSLQ96HA7 1378 aa23.68■■□□□ 1.38
SDK1-202ENST00000404826 CASC1Q6TDU7 716 aa23.64■■□□□ 1.38
SDK1-202ENST00000404826 USP35Q9P2H5 1018 aa23.61■■□□□ 1.37
SDK1-202ENST00000404826 FAM9BQ8IZU0 186 aa23.59■■□□□ 1.37
SDK1-202ENST00000404826 DCAF1Q9Y4B6 1507 aa23.56■■□□□ 1.36
SDK1-202ENST00000404826 RTN4Q9NQC3 1192 aaKnown RBP23.54■■□□□ 1.36
SDK1-202ENST00000404826 CCDC180Q9P1Z9 1646 aa23.53■■□□□ 1.36
SDK1-202ENST00000404826 NOP58Q9Y2X3 529 aaKnown RBP23.5■■□□□ 1.35
SDK1-202ENST00000404826 SETQ01105 290 aaPredicted RBP23.46■■□□□ 1.35
SDK1-202ENST00000404826 ARID4BQ4LE39 1312 aaPredicted RBP23.44■■□□□ 1.34
SDK1-202ENST00000404826 AMER1Q5JTC6 1135 aaPredicted RBP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms