RNA–Protein interactions for RNA: ENST00000360982.2

NCKAP1-201, Transcript of NCK associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene NCKAP1, Length 4,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-201ENST00000360982 DCAF8L2P0C7V8 631 aa36.31■■■■□ 3.4
NCKAP1-201ENST00000360982 NISCHQ9Y2I1 1504 aa34.74■■■■□ 3.15
NCKAP1-201ENST00000360982 SUPT5HO00267 1087 aaKnown RBP33.94■■■■□ 3.02
NCKAP1-201ENST00000360982 SHROOM4Q9ULL8 1493 aa33.36■■■□□ 2.93
NCKAP1-201ENST00000360982 EHMT2Q96KQ7 1210 aa32.59■■■□□ 2.81
NCKAP1-201ENST00000360982 APLP2Q06481 763 aa32.56■■■□□ 2.8
NCKAP1-201ENST00000360982 FAM9AQ8IZU1 332 aaPredicted RBP32.56■■■□□ 2.8
NCKAP1-201ENST00000360982 PELP1Q8IZL8 1130 aaKnown RBP32.08■■■□□ 2.73
NCKAP1-201ENST00000360982 TRIM41Q8WV44 630 aa31.63■■■□□ 2.65
NCKAP1-201ENST00000360982 MYT1Q01538 1121 aa31.61■■■□□ 2.65
NCKAP1-201ENST00000360982 PCGF6Q9BYE7 350 aa31.53■■■□□ 2.64
NCKAP1-201ENST00000360982 RANGAP1P46060 587 aaPredicted RBP31.48■■■□□ 2.63
NCKAP1-201ENST00000360982 TTBK1Q5TCY1 1321 aaPredicted RBP31.43■■■□□ 2.62
NCKAP1-201ENST00000360982 ATP1B4Q9UN42 357 aaPredicted RBP31.42■■■□□ 2.62
NCKAP1-201ENST00000360982 UBTFP17480 764 aaKnown RBP31.32■■■□□ 2.6
NCKAP1-201ENST00000360982 CENPBP07199 599 aaPredicted RBP31.07■■■□□ 2.56
NCKAP1-201ENST00000360982 ZEB1P37275 1124 aaPredicted RBP30.92■■■□□ 2.54
NCKAP1-201ENST00000360982 CCER1Q8TC90 406 aaPredicted RBP30.86■■■□□ 2.53
NCKAP1-201ENST00000360982 HRCP23327 699 aa30.8■■■□□ 2.52
NCKAP1-201ENST00000360982 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.54■■■□□ 2.48
NCKAP1-201ENST00000360982 HNRNPUL2Q1KMD3 747 aaKnown RBP30.54■■■□□ 2.48
NCKAP1-201ENST00000360982 MYT1LQ9UL68 1186 aa30.49■■■□□ 2.47
NCKAP1-201ENST00000360982 ERICH6Q7L0X2 663 aa30.4■■■□□ 2.46
NCKAP1-201ENST00000360982 ABCC9O60706 1549 aa30.34■■■□□ 2.45
NCKAP1-201ENST00000360982 PABPN1Q86U42 306 aaKnown RBP eCLIP30.17■■■□□ 2.42
NCKAP1-201ENST00000360982 PPARGC1BQ86YN6 1023 aaKnown RBP30.16■■■□□ 2.42
NCKAP1-201ENST00000360982 YTHDC1Q96MU7 727 aaKnown RBP30.15■■■□□ 2.42
NCKAP1-201ENST00000360982 NEFLP07196 543 aa30.1■■■□□ 2.41
NCKAP1-201ENST00000360982 ITGAEP38570 1179 aa30.1■■■□□ 2.41
NCKAP1-201ENST00000360982 TRIM26Q12899 539 aaPredicted RBP30.07■■■□□ 2.4
NCKAP1-201ENST00000360982 CHIC1Q5VXU3 224 aa29.98■■■□□ 2.39
NCKAP1-201ENST00000360982 POLR3GLQ9BT43 218 aa29.78■■■□□ 2.36
NCKAP1-201ENST00000360982 LOC105371045A0A1W2PR82 267 aa29.76■■■□□ 2.35
NCKAP1-201ENST00000360982 FBLN2P98095 1184 aa29.54■■■□□ 2.32
NCKAP1-201ENST00000360982 FAM50AQ14320 339 aaKnown RBP29.48■■■□□ 2.31
NCKAP1-201ENST00000360982 SLC4A1APQ9BWU0 796 aaKnown RBP29.44■■■□□ 2.3
NCKAP1-201ENST00000360982 GTF3C3Q9Y5Q9 886 aa29.38■■■□□ 2.29
NCKAP1-201ENST00000360982 TRIM52Q96A61 297 aa29.36■■■□□ 2.29
NCKAP1-201ENST00000360982 DIEXFQ68CQ4 756 aaKnown RBP29.29■■■□□ 2.28
NCKAP1-201ENST00000360982 CNGB1Q14028 1251 aaPredicted RBP29.28■■■□□ 2.28
NCKAP1-201ENST00000360982 DAXXQ9UER7 740 aaPredicted RBP29.19■■■□□ 2.26
NCKAP1-201ENST00000360982 ACIN1Q9UKV3 1341 aaKnown RBP29.07■■■□□ 2.24
NCKAP1-201ENST00000360982 CDK11AQ9UQ88 783 aaPredicted RBP29.03■■■□□ 2.24
NCKAP1-201ENST00000360982 CSRNP3Q8WYN3 585 aa29.03■■■□□ 2.24
NCKAP1-201ENST00000360982 NEUROD1Q13562 356 aa28.95■■■□□ 2.23
NCKAP1-201ENST00000360982 SCRIBQ14160 1630 aa28.94■■■□□ 2.22
NCKAP1-201ENST00000360982 P3H3Q8IVL6 736 aa28.91■■■□□ 2.22
NCKAP1-201ENST00000360982 ZNF326Q5BKZ1 582 aaKnown RBP28.9■■■□□ 2.22
NCKAP1-201ENST00000360982 NPM1P06748 294 aaKnown RBP eCLIP28.83■■■□□ 2.21
NCKAP1-201ENST00000360982 ARID3CA6NKF2 412 aa28.82■■■□□ 2.2
NCKAP1-201ENST00000360982 BCANQ96GW7 911 aa28.8■■■□□ 2.2
NCKAP1-201ENST00000360982 ESF1Q9H501 851 aaKnown RBP28.8■■■□□ 2.2
NCKAP1-201ENST00000360982 ZNF777Q9ULD5 760 aaPredicted RBP28.76■■■□□ 2.19
NCKAP1-201ENST00000360982 CLSPNQ9HAW4 1339 aa28.75■■■□□ 2.19
NCKAP1-201ENST00000360982 RTL5Q5HYW3 569 aaPredicted RBP28.71■■■□□ 2.19
NCKAP1-201ENST00000360982 SCAF1Q9H7N4 1312 aaKnown RBP28.7■■■□□ 2.18
NCKAP1-201ENST00000360982 ZCCHC6Q5VYS8 1495 aaKnown RBP28.64■■■□□ 2.17
NCKAP1-201ENST00000360982 ANP32CO43423 234 aa28.62■■■□□ 2.17
NCKAP1-201ENST00000360982 NEFMP07197 916 aa28.62■■■□□ 2.17
NCKAP1-201ENST00000360982 ZBTB47Q9UFB7 747 aaPredicted RBP28.53■■■□□ 2.16
NCKAP1-201ENST00000360982 STAG3Q9UJ98 1225 aa28.47■■■□□ 2.15
NCKAP1-201ENST00000360982 CCDC180Q9P1Z9 1646 aa28.46■■■□□ 2.15
NCKAP1-201ENST00000360982 ZNF316A6NFI3 1004 aaPredicted RBP28.43■■■□□ 2.14
NCKAP1-201ENST00000360982 SLC24A1O60721 1099 aa28.41■■■□□ 2.14
NCKAP1-201ENST00000360982 CHMP7Q8WUX9 453 aaPredicted RBP28.4■■■□□ 2.14
NCKAP1-201ENST00000360982 RB1CC1Q8TDY2 1594 aa28.38■■■□□ 2.13
NCKAP1-201ENST00000360982 CHGAP10645 457 aaKnown RBP28.36■■■□□ 2.13
NCKAP1-201ENST00000360982 CANXP27824 592 aaKnown RBP28.27■■■□□ 2.12
NCKAP1-201ENST00000360982 TSPY4P0CV99 314 aa28.27■■■□□ 2.12
NCKAP1-201ENST00000360982 TSPY10P0CW01 314 aa28.27■■■□□ 2.12
NCKAP1-201ENST00000360982 TONSLQ96HA7 1378 aa28.19■■■□□ 2.1
NCKAP1-201ENST00000360982 PLPPR3Q6T4P5 718 aa28.17■■■□□ 2.1
NCKAP1-201ENST00000360982 MTUS2Q5JR59 1369 aa28.12■■■□□ 2.09
NCKAP1-201ENST00000360982 DCAF1Q9Y4B6 1507 aa28.09■■■□□ 2.09
NCKAP1-201ENST00000360982 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.08■■■□□ 2.094e-7■□□□□ 10.2
NCKAP1-201ENST00000360982 NACADO15069 1562 aa28.04■■■□□ 2.08
NCKAP1-201ENST00000360982 CHIC2Q9UKJ5 165 aa28.03■■■□□ 2.08
NCKAP1-201ENST00000360982 PLEKHD1A6NEE1 506 aa27.97■■■□□ 2.07
NCKAP1-201ENST00000360982 BCL11AQ9H165 835 aa27.93■■■□□ 2.06
NCKAP1-201ENST00000360982 BAZ1BQ9UIG0 1483 aaKnown RBP27.9■■■□□ 2.06
NCKAP1-201ENST00000360982 EEA1Q15075 1411 aa27.89■■■□□ 2.05
NCKAP1-201ENST00000360982 KCNH8Q96L42 1107 aa27.87■■■□□ 2.05
NCKAP1-201ENST00000360982 CLIP1P30622 1438 aa27.86■■■□□ 2.05
NCKAP1-201ENST00000360982 EIF5BO60841 1220 aaKnown RBP27.86■■■□□ 2.05
NCKAP1-201ENST00000360982 FKBP8Q14318 412 aa27.85■■■□□ 2.05
NCKAP1-201ENST00000360982 RSF1Q96T23 1441 aaPredicted RBP27.84■■■□□ 2.05
NCKAP1-201ENST00000360982 ANP32EQ9BTT0 268 aa27.81■■■□□ 2.04
NCKAP1-201ENST00000360982 ERCC6Q03468 1493 aa27.75■■■□□ 2.03
NCKAP1-201ENST00000360982 WRNQ14191 1432 aaPredicted RBP eCLIP27.75■■■□□ 2.03
NCKAP1-201ENST00000360982 ANP32AP39687 249 aaKnown RBP27.75■■■□□ 2.03
NCKAP1-201ENST00000360982 PPP1R15AO75807 674 aaPredicted RBP27.74■■■□□ 2.03
NCKAP1-201ENST00000360982 KDM2AQ9Y2K7 1162 aa27.73■■■□□ 2.03
NCKAP1-201ENST00000360982 KIF27Q86VH2 1401 aa27.73■■■□□ 2.03
NCKAP1-201ENST00000360982 TMC1Q8TDI8 760 aa27.67■■■□□ 2.02
NCKAP1-201ENST00000360982 GOLGA3Q08378 1498 aa27.65■■■□□ 2.02
NCKAP1-201ENST00000360982 DDX10Q13206 875 aaKnown RBP27.64■■■□□ 2.01
NCKAP1-201ENST00000360982 CFDP1Q9UEE9 299 aaPredicted RBP27.63■■■□□ 2.01
NCKAP1-201ENST00000360982 ARID4BQ4LE39 1312 aaPredicted RBP27.62■■■□□ 2.01
NCKAP1-201ENST00000360982 RRP7BPQ9NSQ0 103 aa27.61■■■□□ 2.01
NCKAP1-201ENST00000360982 WDR43Q15061 677 aaKnown RBP eCLIP27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms