RNA–Protein interactions for RNA: ENST00000335367.7

AGAP3-201, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 1 (best) BASIC

Gene AGAP3, Length 2,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-201ENST00000335367 NISCHQ9Y2I1 1504 aa44.36■■■■■ 4.69
AGAP3-201ENST00000335367 SHROOM4Q9ULL8 1493 aa38.85■■■■□ 3.81
AGAP3-201ENST00000335367 SUPT5HO00267 1087 aaKnown RBP38.5■■■■□ 3.75
AGAP3-201ENST00000335367 HRCP23327 699 aa37.92■■■■□ 3.66
AGAP3-201ENST00000335367 CCDC180Q9P1Z9 1646 aa37.89■■■■□ 3.66
AGAP3-201ENST00000335367 MYO15BQ96JP2 1530 aa37.75■■■■□ 3.63
AGAP3-201ENST00000335367 CHIC1Q5VXU3 224 aa37.66■■■■□ 3.62
AGAP3-201ENST00000335367 ZCCHC6Q5VYS8 1495 aaKnown RBP37.65■■■■□ 3.62
AGAP3-201ENST00000335367 PCGF6Q9BYE7 350 aa37.5■■■■□ 3.59
AGAP3-201ENST00000335367 PPARGC1BQ86YN6 1023 aaKnown RBP37.22■■■■□ 3.55
AGAP3-201ENST00000335367 DCAF8L2P0C7V8 631 aa37.05■■■■□ 3.52
AGAP3-201ENST00000335367 DCAF1Q9Y4B6 1507 aa36.77■■■■□ 3.48
AGAP3-201ENST00000335367 LOC105371045A0A1W2PR82 267 aa36.76■■■■□ 3.47
AGAP3-201ENST00000335367 TRIM26Q12899 539 aaPredicted RBP36.41■■■■□ 3.42
AGAP3-201ENST00000335367 ZEB1P37275 1124 aaPredicted RBP35.89■■■■□ 3.34
AGAP3-201ENST00000335367 ABCC9O60706 1549 aa35.68■■■■□ 3.3
AGAP3-201ENST00000335367 TRIM41Q8WV44 630 aa35.66■■■■□ 3.3
AGAP3-201ENST00000335367 PELP1Q8IZL8 1130 aaKnown RBP35.62■■■■□ 3.29
AGAP3-201ENST00000335367 FAM9AQ8IZU1 332 aaPredicted RBP35.61■■■■□ 3.29
AGAP3-201ENST00000335367 SCAF1Q9H7N4 1312 aaKnown RBP35.56■■■■□ 3.28
AGAP3-201ENST00000335367 RSF1Q96T23 1441 aaPredicted RBP35.51■■■■□ 3.27
AGAP3-201ENST00000335367 EHMT2Q96KQ7 1210 aa35.45■■■■□ 3.27
AGAP3-201ENST00000335367 RB1CC1Q8TDY2 1594 aa35.31■■■■□ 3.24
AGAP3-201ENST00000335367 SCRIBQ14160 1630 aa35.28■■■■□ 3.24
AGAP3-201ENST00000335367 NACADO15069 1562 aa35■■■■□ 3.19
AGAP3-201ENST00000335367 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.97■■■■□ 3.19
AGAP3-201ENST00000335367 ACIN1Q9UKV3 1341 aaKnown RBP34.88■■■■□ 3.17
AGAP3-201ENST00000335367 CCER1Q8TC90 406 aaPredicted RBP34.87■■■■□ 3.17
AGAP3-201ENST00000335367 NEUROD1Q13562 356 aa34.82■■■■□ 3.17
AGAP3-201ENST00000335367 CECR2Q9BXF3 1484 aa34.72■■■■□ 3.15
AGAP3-201ENST00000335367 MROH2BQ7Z745 1585 aa34.63■■■■□ 3.13
AGAP3-201ENST00000335367 DIEXFQ68CQ4 756 aaKnown RBP34.63■■■■□ 3.13
AGAP3-201ENST00000335367 GTF3C3Q9Y5Q9 886 aa34.58■■■■□ 3.13
AGAP3-201ENST00000335367 WIZO95785 1651 aa34.53■■■■□ 3.12
AGAP3-201ENST00000335367 CENPBP07199 599 aaPredicted RBP34.51■■■■□ 3.11
AGAP3-201ENST00000335367 TTBK1Q5TCY1 1321 aaPredicted RBP34.5■■■■□ 3.11
AGAP3-201ENST00000335367 EIF4G1Q04637 1599 aaKnown RBP34.23■■■■□ 3.07
AGAP3-201ENST00000335367 BAZ1AQ9NRL2 1556 aaPredicted RBP34.22■■■■□ 3.07
AGAP3-201ENST00000335367 WRNQ14191 1432 aaPredicted RBP eCLIP34.19■■■■□ 3.06
AGAP3-201ENST00000335367 CEP162Q5TB80 1403 aa34.14■■■■□ 3.06
AGAP3-201ENST00000335367 ABCC8Q09428 1581 aa34.12■■■■□ 3.05
AGAP3-201ENST00000335367 CCDC88BA6NC98 1476 aa34.11■■■■□ 3.05
AGAP3-201ENST00000335367 ZNF316A6NFI3 1004 aaPredicted RBP34.09■■■■□ 3.05
AGAP3-201ENST00000335367 YTHDC1Q96MU7 727 aaKnown RBP34.03■■■■□ 3.04
AGAP3-201ENST00000335367 MYT1Q01538 1121 aa34.02■■■■□ 3.04
AGAP3-201ENST00000335367 UNC13AQ9UPW8 1703 aa33.97■■■■□ 3.03
AGAP3-201ENST00000335367 SOGA1O94964 1423 aa33.97■■■■□ 3.03
AGAP3-201ENST00000335367 TNIKQ9UKE5 1360 aa33.95■■■■□ 3.03
AGAP3-201ENST00000335367 UBTFP17480 764 aaKnown RBP33.91■■■■□ 3.02
AGAP3-201ENST00000335367 CSRNP3Q8WYN3 585 aa33.83■■■■□ 3.01
AGAP3-201ENST00000335367 TOP2AP11388 1531 aaKnown RBP33.82■■■■□ 3.01
AGAP3-201ENST00000335367 MIER1Q8N108 512 aa33.81■■■■□ 3
AGAP3-201ENST00000335367 RUSC2Q8N2Y8 1516 aa33.79■■■■□ 3
AGAP3-201ENST00000335367 SMARCA2P51531 1590 aa33.73■■■□□ 2.99
AGAP3-201ENST00000335367 HNRNPUL2Q1KMD3 747 aaKnown RBP33.72■■■□□ 2.99
AGAP3-201ENST00000335367 EEA1Q15075 1411 aa33.67■■■□□ 2.98
AGAP3-201ENST00000335367 SMARCA4P51532 1647 aa33.61■■■□□ 2.97
AGAP3-201ENST00000335367 GOLGA3Q08378 1498 aa33.61■■■□□ 2.97
AGAP3-201ENST00000335367 BICRAQ9NZM4 1560 aa33.44■■■□□ 2.94
AGAP3-201ENST00000335367 CLIP1P30622 1438 aa33.33■■■□□ 2.93
AGAP3-201ENST00000335367 CEP164Q9UPV0 1460 aa33.31■■■□□ 2.92
AGAP3-201ENST00000335367 APLP2Q06481 763 aa33.28■■■□□ 2.92
AGAP3-201ENST00000335367 VPS8Q8N3P4 1428 aa33.24■■■□□ 2.91
AGAP3-201ENST00000335367 RANGAP1P46060 587 aaPredicted RBP33.23■■■□□ 2.91
AGAP3-201ENST00000335367 KIF21BO75037 1637 aa33.21■■■□□ 2.91
AGAP3-201ENST00000335367 SYNJ1O43426 1573 aa33.15■■■□□ 2.9
AGAP3-201ENST00000335367 PEG3Q9GZU2 1588 aa33.13■■■□□ 2.89
AGAP3-201ENST00000335367 RAPGEF2Q9Y4G8 1499 aa33.06■■■□□ 2.88
AGAP3-201ENST00000335367 SUPT16HQ9Y5B9 1047 aaKnown RBP33.05■■■□□ 2.88
AGAP3-201ENST00000335367 PABPN1Q86U42 306 aaKnown RBP eCLIP33■■■□□ 2.87
AGAP3-201ENST00000335367 BAZ1BQ9UIG0 1483 aaKnown RBP33■■■□□ 2.87
AGAP3-201ENST00000335367 DHX57Q6P158 1386 aaKnown RBP32.98■■■□□ 2.87
AGAP3-201ENST00000335367 CLSPNQ9HAW4 1339 aa32.94■■■□□ 2.86
AGAP3-201ENST00000335367 KANK4Q5T7N3 995 aaPredicted RBP32.77■■■□□ 2.84
AGAP3-201ENST00000335367 TSHZ2Q9NRE2 1034 aa32.74■■■□□ 2.83
AGAP3-201ENST00000335367 ATAD2BQ9ULI0 1458 aa32.72■■■□□ 2.83
AGAP3-201ENST00000335367 ARAP1Q96P48 1450 aa32.66■■■□□ 2.82
AGAP3-201ENST00000335367 KCNH8Q96L42 1107 aa32.61■■■□□ 2.81
AGAP3-201ENST00000335367 TOP2BQ02880 1626 aa32.57■■■□□ 2.8
AGAP3-201ENST00000335367 ITGAEP38570 1179 aa32.56■■■□□ 2.8
AGAP3-201ENST00000335367 RRBP1Q9P2E9 1410 aaKnown RBP32.56■■■□□ 2.8
AGAP3-201ENST00000335367 ERICH3Q5RHP9 1530 aa32.51■■■□□ 2.79
AGAP3-201ENST00000335367 PRXQ9BXM0 1461 aa32.51■■■□□ 2.79
AGAP3-201ENST00000335367 ANP32EQ9BTT0 268 aa32.5■■■□□ 2.79
AGAP3-201ENST00000335367 BCANQ96GW7 911 aa32.47■■■□□ 2.79
AGAP3-201ENST00000335367 CCNB3Q8WWL7 1395 aa32.45■■■□□ 2.79
AGAP3-201ENST00000335367 CUX2O14529 1486 aa32.44■■■□□ 2.78
AGAP3-201ENST00000335367 BIVM-ERCC5R4GMW8 1640 aa32.39■■■□□ 2.78
AGAP3-201ENST00000335367 HMGXB3Q12766 1538 aa32.35■■■□□ 2.77
AGAP3-201ENST00000335367 FKBP8Q14318 412 aa32.34■■■□□ 2.77
AGAP3-201ENST00000335367 RAB3GAP2Q9H2M9 1393 aa32.33■■■□□ 2.77
AGAP3-201ENST00000335367 DDX10Q13206 875 aaKnown RBP32.3■■■□□ 2.76
AGAP3-201ENST00000335367 MAPKBP1O60336 1514 aa32.27■■■□□ 2.76
AGAP3-201ENST00000335367 NCAPD3P42695 1498 aa32.26■■■□□ 2.76
AGAP3-201ENST00000335367 ARHGAP35Q9NRY4 1499 aa32.25■■■□□ 2.75
AGAP3-201ENST00000335367 KIF27Q86VH2 1401 aa32.21■■■□□ 2.75
AGAP3-201ENST00000335367 SIN3AQ96ST3 1273 aa32.18■■■□□ 2.74
AGAP3-201ENST00000335367 CUX1P39880 1505 aa32.15■■■□□ 2.74
AGAP3-201ENST00000335367 WDR97A6NE52 1622 aa32.15■■■□□ 2.74
AGAP3-201ENST00000335367 SETD5Q9C0A6 1442 aa32.11■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms