RNA–Protein interactions for RNA: ENST00000368223.3

NES-201, Transcript of nestin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NES, Length 5,558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NES-201ENST00000368223 DCAF8L2P0C7V8 631 aa34.04■■■■□ 3.04
NES-201ENST00000368223 SUPT5HO00267 1087 aaKnown RBP32.39■■■□□ 2.78
NES-201ENST00000368223 EHMT2Q96KQ7 1210 aa31.76■■■□□ 2.67
NES-201ENST00000368223 SHROOM4Q9ULL8 1493 aa31.68■■■□□ 2.66
NES-201ENST00000368223 PELP1Q8IZL8 1130 aaKnown RBP31.3■■■□□ 2.6
NES-201ENST00000368223 NISCHQ9Y2I1 1504 aa31.27■■■□□ 2.6
NES-201ENST00000368223 APLP2Q06481 763 aa30.95■■■□□ 2.55
NES-201ENST00000368223 TTBK1Q5TCY1 1321 aaPredicted RBP30.72■■■□□ 2.51
NES-201ENST00000368223 FAM9AQ8IZU1 332 aaPredicted RBP30.69■■■□□ 2.5
NES-201ENST00000368223 PCGF6Q9BYE7 350 aa30.47■■■□□ 2.47
NES-201ENST00000368223 RANGAP1P46060 587 aaPredicted RBP30.25■■■□□ 2.43
NES-201ENST00000368223 ERICH6Q7L0X2 663 aa30.19■■■□□ 2.42
NES-201ENST00000368223 CENPBP07199 599 aaPredicted RBP30.09■■■□□ 2.41
NES-201ENST00000368223 CCER1Q8TC90 406 aaPredicted RBP30■■■□□ 2.39
NES-201ENST00000368223 ATP1B4Q9UN42 357 aaPredicted RBP29.95■■■□□ 2.39
NES-201ENST00000368223 ZEB1P37275 1124 aaPredicted RBP29.87■■■□□ 2.37
NES-201ENST00000368223 TRIM41Q8WV44 630 aa29.85■■■□□ 2.37
NES-201ENST00000368223 YTHDC1Q96MU7 727 aaKnown RBP29.66■■■□□ 2.34
NES-201ENST00000368223 UBTFP17480 764 aaKnown RBP29.65■■■□□ 2.34
NES-201ENST00000368223 NEFLP07196 543 aa29.55■■■□□ 2.32
NES-201ENST00000368223 PPARGC1BQ86YN6 1023 aaKnown RBP29.39■■■□□ 2.29
NES-201ENST00000368223 MYT1Q01538 1121 aa28.98■■■□□ 2.23
NES-201ENST00000368223 TRIM26Q12899 539 aaPredicted RBP28.94■■■□□ 2.22
NES-201ENST00000368223 ITGAEP38570 1179 aa28.94■■■□□ 2.22
NES-201ENST00000368223 POLR3GLQ9BT43 218 aa28.93■■■□□ 2.22
NES-201ENST00000368223 DAXXQ9UER7 740 aaPredicted RBP28.82■■■□□ 2.2
NES-201ENST00000368223 MYT1LQ9UL68 1186 aa28.81■■■□□ 2.2
NES-201ENST00000368223 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.76■■■□□ 2.2
NES-201ENST00000368223 HNRNPUL2Q1KMD3 747 aaKnown RBP28.76■■■□□ 2.2
NES-201ENST00000368223 HRCP23327 699 aa28.75■■■□□ 2.19
NES-201ENST00000368223 CNGB1Q14028 1251 aaPredicted RBP28.73■■■□□ 2.19
NES-201ENST00000368223 LOC105371045A0A1W2PR82 267 aa28.6■■■□□ 2.17
NES-201ENST00000368223 CHIC1Q5VXU3 224 aa28.44■■■□□ 2.14
NES-201ENST00000368223 SLC4A1APQ9BWU0 796 aaKnown RBP28.36■■■□□ 2.13
NES-201ENST00000368223 CLSPNQ9HAW4 1339 aa28.18■■■□□ 2.1
NES-201ENST00000368223 ZNF316A6NFI3 1004 aaPredicted RBP28.17■■■□□ 2.1
NES-201ENST00000368223 DIEXFQ68CQ4 756 aaKnown RBP28.15■■■□□ 2.1
NES-201ENST00000368223 RTL5Q5HYW3 569 aaPredicted RBP28.13■■■□□ 2.09
NES-201ENST00000368223 FAM50AQ14320 339 aaKnown RBP28.06■■■□□ 2.08
NES-201ENST00000368223 TRIM52Q96A61 297 aa27.97■■■□□ 2.07
NES-201ENST00000368223 NEUROD1Q13562 356 aa27.93■■■□□ 2.06
NES-201ENST00000368223 BCANQ96GW7 911 aa27.91■■■□□ 2.06
NES-201ENST00000368223 ZNF326Q5BKZ1 582 aaKnown RBP27.76■■■□□ 2.03
NES-201ENST00000368223 GTF3C3Q9Y5Q9 886 aa27.69■■■□□ 2.02
NES-201ENST00000368223 ANP32CO43423 234 aa27.65■■■□□ 2.02
NES-201ENST00000368223 CDK11AQ9UQ88 783 aaPredicted RBP27.57■■■□□ 2
NES-201ENST00000368223 PABPN1Q86U42 306 aaKnown RBP eCLIP27.54■■■□□ 2
NES-201ENST00000368223 ZBTB47Q9UFB7 747 aaPredicted RBP27.54■■■□□ 2
NES-201ENST00000368223 BCL11AQ9H165 835 aa27.54■■■□□ 2
NES-201ENST00000368223 CANXP27824 592 aaKnown RBP27.45■■□□□ 1.98
NES-201ENST00000368223 SLC24A1O60721 1099 aa27.44■■□□□ 1.98
NES-201ENST00000368223 FBLN2P98095 1184 aa27.39■■□□□ 1.98
NES-201ENST00000368223 ARID3CA6NKF2 412 aa27.3■■□□□ 1.96
NES-201ENST00000368223 ABCC9O60706 1549 aa27.28■■□□□ 1.96
NES-201ENST00000368223 P3H3Q8IVL6 736 aa27.26■■□□□ 1.95
NES-201ENST00000368223 NEFMP07197 916 aa27.2■■□□□ 1.95
NES-201ENST00000368223 NPM2Q86SE8 214 aaKnown RBP27.16■■□□□ 1.94
NES-201ENST00000368223 ANP32AP39687 249 aaKnown RBP27.14■■□□□ 1.94
NES-201ENST00000368223 ACIN1Q9UKV3 1341 aaKnown RBP27.13■■□□□ 1.93
NES-201ENST00000368223 ZNF777Q9ULD5 760 aaPredicted RBP27.1■■□□□ 1.93
NES-201ENST00000368223 CSRNP3Q8WYN3 585 aa26.95■■□□□ 1.9
NES-201ENST00000368223 FKBP8Q14318 412 aa26.93■■□□□ 1.9
NES-201ENST00000368223 HSP90AA1P07900 732 aaKnown RBP26.81■■□□□ 1.88
NES-201ENST00000368223 CHGAP10645 457 aaKnown RBP26.81■■□□□ 1.88
NES-201ENST00000368223 HNRNPUQ00839 825 aaKnown RBP eCLIP26.81■■□□□ 1.88
NES-201ENST00000368223 TONSLQ96HA7 1378 aa26.81■■□□□ 1.88
NES-201ENST00000368223 FAM9BQ8IZU0 186 aa26.79■■□□□ 1.88
NES-201ENST00000368223 EIF5BO60841 1220 aaKnown RBP26.78■■□□□ 1.88
NES-201ENST00000368223 SALL2Q9Y467 1007 aaPredicted RBP26.77■■□□□ 1.88
NES-201ENST00000368223 ANP32BQ92688 251 aaKnown RBP26.76■■□□□ 1.87
NES-201ENST00000368223 DDX10Q13206 875 aaKnown RBP26.74■■□□□ 1.87
NES-201ENST00000368223 ESF1Q9H501 851 aaKnown RBP26.7■■□□□ 1.87
NES-201ENST00000368223 STAG3Q9UJ98 1225 aa26.69■■□□□ 1.86
NES-201ENST00000368223 PLPPR3Q6T4P5 718 aa26.69■■□□□ 1.86
NES-201ENST00000368223 UPF2Q9HAU5 1272 aaKnown RBP26.68■■□□□ 1.86
NES-201ENST00000368223 CHIC2Q9UKJ5 165 aa26.57■■□□□ 1.84
NES-201ENST00000368223 NBR1Q14596 966 aa26.55■■□□□ 1.84
NES-201ENST00000368223 CCDC136Q96JN2 1154 aa26.55■■□□□ 1.84
NES-201ENST00000368223 TMC1Q8TDI8 760 aa26.53■■□□□ 1.84
NES-201ENST00000368223 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.53■■□□□ 1.84
NES-201ENST00000368223 ARXQ96QS3 562 aa26.53■■□□□ 1.84
NES-201ENST00000368223 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.46■■□□□ 1.83
NES-201ENST00000368223 WDR43Q15061 677 aaKnown RBP eCLIP26.45■■□□□ 1.82
NES-201ENST00000368223 KDM2AQ9Y2K7 1162 aa26.43■■□□□ 1.82
NES-201ENST00000368223 IRX6P78412 446 aaPredicted RBP26.42■■□□□ 1.82
NES-201ENST00000368223 MRS2Q9HD23 443 aa26.42■■□□□ 1.82
NES-201ENST00000368223 NPM1P06748 294 aaKnown RBP eCLIP26.36■■□□□ 1.81
NES-201ENST00000368223 HIRIP3Q9BW71 556 aaPredicted RBP26.35■■□□□ 1.81
NES-201ENST00000368223 DCAF1Q9Y4B6 1507 aa26.32■■□□□ 1.8
NES-201ENST00000368223 SCRIBQ14160 1630 aa26.31■■□□□ 1.8
NES-201ENST00000368223 MIER1Q8N108 512 aa26.27■■□□□ 1.8
NES-201ENST00000368223 SCAF1Q9H7N4 1312 aaKnown RBP26.25■■□□□ 1.79
NES-201ENST00000368223 GLIPR1L2Q4G1C9 344 aa26.24■■□□□ 1.79
NES-201ENST00000368223 SENP3Q9H4L4 574 aaPredicted RBP26.23■■□□□ 1.79
NES-201ENST00000368223 TSPY4P0CV99 314 aa26.23■■□□□ 1.79
NES-201ENST00000368223 TSPY10P0CW01 314 aa26.23■■□□□ 1.79
NES-201ENST00000368223 MYH16Q9H6N6 1097 aa26.2■■□□□ 1.78
NES-201ENST00000368223 MTUS2Q5JR59 1369 aa26.19■■□□□ 1.78
NES-201ENST00000368223 A0A0G2JS52 829 aa26.15■■□□□ 1.78
NES-201ENST00000368223 ZBTB7CA1YPR0 619 aa26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms