Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.11■■□□□ 1.77
NCDNQ9UBB6 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
NCDNQ9UBB6 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
NCDNQ9UBB6 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.11■■□□□ 1.77
NCDNQ9UBB6 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.1■■□□□ 1.77
NCDNQ9UBB6 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC26.1■■□□□ 1.77
NCDNQ9UBB6 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
NCDNQ9UBB6 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC26.09■■□□□ 1.77
NCDNQ9UBB6 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
NCDNQ9UBB6 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC26.08■■□□□ 1.77
NCDNQ9UBB6 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC26.08■■□□□ 1.77
NCDNQ9UBB6 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.08■■□□□ 1.77
NCDNQ9UBB6 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.07■■□□□ 1.76
NCDNQ9UBB6 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.07■■□□□ 1.76
NCDNQ9UBB6 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.07■■□□□ 1.76
NCDNQ9UBB6 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC26.07■■□□□ 1.76
NCDNQ9UBB6 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
NCDNQ9UBB6 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC26.06■■□□□ 1.76
NCDNQ9UBB6 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
NCDNQ9UBB6 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC26.06■■□□□ 1.76
NCDNQ9UBB6 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
NCDNQ9UBB6 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
NCDNQ9UBB6 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
NCDNQ9UBB6 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.05■■□□□ 1.76
NCDNQ9UBB6 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
NCDNQ9UBB6 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
NCDNQ9UBB6 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC26.03■■□□□ 1.76
NCDNQ9UBB6 U85056.1-201ENST00000616429 682 ntBASIC26.03■■□□□ 1.76
NCDNQ9UBB6 RARRES2P1-201ENST00000474487 481 ntBASIC26.02■■□□□ 1.76
NCDNQ9UBB6 HYI-213ENST00000583037 1322 ntTSL 5 BASIC26.02■■□□□ 1.76
NCDNQ9UBB6 TSPY13P-201ENST00000338964 914 ntBASIC26.01■■□□□ 1.75
NCDNQ9UBB6 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC26.01■■□□□ 1.75
NCDNQ9UBB6 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
NCDNQ9UBB6 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC26■■□□□ 1.75
NCDNQ9UBB6 GFER-205ENST00000569451 517 ntTSL 5 BASIC26■■□□□ 1.75
NCDNQ9UBB6 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
NCDNQ9UBB6 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
NCDNQ9UBB6 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
NCDNQ9UBB6 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
NCDNQ9UBB6 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
NCDNQ9UBB6 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
NCDNQ9UBB6 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.96■■□□□ 1.75
NCDNQ9UBB6 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
NCDNQ9UBB6 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
NCDNQ9UBB6 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
NCDNQ9UBB6 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
NCDNQ9UBB6 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC25.95■■□□□ 1.74
NCDNQ9UBB6 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC25.94■■□□□ 1.74
NCDNQ9UBB6 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
NCDNQ9UBB6 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.93■■□□□ 1.74
NCDNQ9UBB6 AC004987.1-201ENST00000428627 508 ntBASIC25.92■■□□□ 1.74
NCDNQ9UBB6 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
NCDNQ9UBB6 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
NCDNQ9UBB6 ATP5G2P3-201ENST00000429083 425 ntBASIC25.91■■□□□ 1.74
NCDNQ9UBB6 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC25.9■■□□□ 1.74
NCDNQ9UBB6 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
NCDNQ9UBB6 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
NCDNQ9UBB6 GUK1-208ENST00000366728 842 ntTSL 2 BASIC25.89■■□□□ 1.74
NCDNQ9UBB6 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC25.89■■□□□ 1.74
NCDNQ9UBB6 LINC00273-201ENST00000539813 1452 ntBASIC25.89■■□□□ 1.73
NCDNQ9UBB6 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
NCDNQ9UBB6 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
NCDNQ9UBB6 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25.87■■□□□ 1.73
NCDNQ9UBB6 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
NCDNQ9UBB6 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
NCDNQ9UBB6 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
NCDNQ9UBB6 AC019069.1-201ENST00000610008 1333 ntBASIC25.87■■□□□ 1.73
NCDNQ9UBB6 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
NCDNQ9UBB6 KRT18P60-201ENST00000312876 1297 ntBASIC25.85■■□□□ 1.73
NCDNQ9UBB6 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC25.85■■□□□ 1.73
NCDNQ9UBB6 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.84■■□□□ 1.73
NCDNQ9UBB6 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC25.84■■□□□ 1.73
NCDNQ9UBB6 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
NCDNQ9UBB6 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC25.84■■□□□ 1.73
NCDNQ9UBB6 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC25.83■■□□□ 1.73
NCDNQ9UBB6 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
NCDNQ9UBB6 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
NCDNQ9UBB6 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.81■■□□□ 1.72
NCDNQ9UBB6 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
NCDNQ9UBB6 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
NCDNQ9UBB6 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC25.8■■□□□ 1.72
NCDNQ9UBB6 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
NCDNQ9UBB6 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC25.79■■□□□ 1.72
NCDNQ9UBB6 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
NCDNQ9UBB6 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
NCDNQ9UBB6 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
NCDNQ9UBB6 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
NCDNQ9UBB6 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
NCDNQ9UBB6 HES4-204ENST00000484667 667 ntTSL 3 BASIC25.78■■□□□ 1.72
NCDNQ9UBB6 AC060814.1-201ENST00000554326 538 ntBASIC25.77■■□□□ 1.72
NCDNQ9UBB6 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.77■■□□□ 1.72
NCDNQ9UBB6 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
NCDNQ9UBB6 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
NCDNQ9UBB6 AL592295.1-201ENST00000400984 884 ntBASIC25.75■■□□□ 1.71
NCDNQ9UBB6 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.75■■□□□ 1.71
NCDNQ9UBB6 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC25.75■■□□□ 1.71
NCDNQ9UBB6 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC25.75■■□□□ 1.71
NCDNQ9UBB6 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC25.74■■□□□ 1.71
NCDNQ9UBB6 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
NCDNQ9UBB6 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms