Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC34.63■■■■□ 3.13
NCDNQ9UBB6 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC34.32■■■■□ 3.08
NCDNQ9UBB6 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC34.25■■■■□ 3.07
NCDNQ9UBB6 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
NCDNQ9UBB6 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC33.29■■■□□ 2.92
NCDNQ9UBB6 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
NCDNQ9UBB6 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
NCDNQ9UBB6 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC33.13■■■□□ 2.89
NCDNQ9UBB6 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC33.11■■■□□ 2.89
NCDNQ9UBB6 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
NCDNQ9UBB6 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC32.78■■■□□ 2.84
NCDNQ9UBB6 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC32.65■■■□□ 2.82
NCDNQ9UBB6 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
NCDNQ9UBB6 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC32.53■■■□□ 2.8
NCDNQ9UBB6 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
NCDNQ9UBB6 AL356512.1-201ENST00000607453 1739 ntBASIC32.45■■■□□ 2.78
NCDNQ9UBB6 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC32.28■■■□□ 2.76
NCDNQ9UBB6 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC32.26■■■□□ 2.75
NCDNQ9UBB6 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
NCDNQ9UBB6 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC32.12■■■□□ 2.73
NCDNQ9UBB6 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
NCDNQ9UBB6 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
NCDNQ9UBB6 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC32.06■■■□□ 2.72
NCDNQ9UBB6 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC32.01■■■□□ 2.72
NCDNQ9UBB6 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
NCDNQ9UBB6 ZNRF2P1-201ENST00000441407 443 ntBASIC31.82■■■□□ 2.68
NCDNQ9UBB6 INO80B-203ENST00000409917 796 ntTSL 2 BASIC31.77■■■□□ 2.68
NCDNQ9UBB6 AC006077.2-201ENST00000623591 457 ntBASIC31.74■■■□□ 2.67
NCDNQ9UBB6 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC31.67■■■□□ 2.66
NCDNQ9UBB6 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
NCDNQ9UBB6 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC31.63■■■□□ 2.65
NCDNQ9UBB6 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
NCDNQ9UBB6 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC31.46■■■□□ 2.63
NCDNQ9UBB6 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
NCDNQ9UBB6 AC015813.7-201ENST00000623294 581 ntBASIC31.18■■■□□ 2.58
NCDNQ9UBB6 AP002365.1-201ENST00000603448 772 ntBASIC31.02■■■□□ 2.56
NCDNQ9UBB6 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC30.95■■■□□ 2.55
NCDNQ9UBB6 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC30.84■■■□□ 2.53
NCDNQ9UBB6 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
NCDNQ9UBB6 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
NCDNQ9UBB6 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
NCDNQ9UBB6 HES6-203ENST00000409160 1600 ntTSL 2 BASIC30.75■■■□□ 2.51
NCDNQ9UBB6 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
NCDNQ9UBB6 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
NCDNQ9UBB6 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC30.68■■■□□ 2.5
NCDNQ9UBB6 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC30.66■■■□□ 2.5
NCDNQ9UBB6 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC30.61■■■□□ 2.49
NCDNQ9UBB6 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC30.55■■■□□ 2.48
NCDNQ9UBB6 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC30.55■■■□□ 2.48
NCDNQ9UBB6 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC30.52■■■□□ 2.48
NCDNQ9UBB6 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC30.51■■■□□ 2.47
NCDNQ9UBB6 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC30.49■■■□□ 2.47
NCDNQ9UBB6 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC30.49■■■□□ 2.47
NCDNQ9UBB6 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC30.49■■■□□ 2.47
NCDNQ9UBB6 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC30.42■■■□□ 2.46
NCDNQ9UBB6 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
NCDNQ9UBB6 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
NCDNQ9UBB6 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC30.4■■■□□ 2.46
NCDNQ9UBB6 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC30.37■■■□□ 2.45
NCDNQ9UBB6 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC30.35■■■□□ 2.45
NCDNQ9UBB6 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC30.34■■■□□ 2.45
NCDNQ9UBB6 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC30.32■■■□□ 2.44
NCDNQ9UBB6 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC30.28■■■□□ 2.44
NCDNQ9UBB6 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
NCDNQ9UBB6 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
NCDNQ9UBB6 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
NCDNQ9UBB6 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC30.17■■■□□ 2.42
NCDNQ9UBB6 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
NCDNQ9UBB6 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC30.13■■■□□ 2.41
NCDNQ9UBB6 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
NCDNQ9UBB6 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC30.11■■■□□ 2.41
NCDNQ9UBB6 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
NCDNQ9UBB6 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC29.98■■■□□ 2.39
NCDNQ9UBB6 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
NCDNQ9UBB6 DYNLL1-208ENST00000550178 581 ntBASIC29.97■■■□□ 2.39
NCDNQ9UBB6 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC29.96■■■□□ 2.39
NCDNQ9UBB6 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
NCDNQ9UBB6 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
NCDNQ9UBB6 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC29.91■■■□□ 2.38
NCDNQ9UBB6 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
NCDNQ9UBB6 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC29.87■■■□□ 2.37
NCDNQ9UBB6 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC29.87■■■□□ 2.37
NCDNQ9UBB6 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
NCDNQ9UBB6 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC29.85■■■□□ 2.37
NCDNQ9UBB6 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
NCDNQ9UBB6 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
NCDNQ9UBB6 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC29.81■■■□□ 2.36
NCDNQ9UBB6 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC29.81■■■□□ 2.36
NCDNQ9UBB6 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC29.8■■■□□ 2.36
NCDNQ9UBB6 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
NCDNQ9UBB6 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC29.79■■■□□ 2.36
NCDNQ9UBB6 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
NCDNQ9UBB6 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC29.77■■■□□ 2.36
NCDNQ9UBB6 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC29.75■■■□□ 2.35
NCDNQ9UBB6 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC29.74■■■□□ 2.35
NCDNQ9UBB6 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC29.74■■■□□ 2.35
NCDNQ9UBB6 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
NCDNQ9UBB6 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC29.72■■■□□ 2.35
NCDNQ9UBB6 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC29.7■■■□□ 2.34
NCDNQ9UBB6 AL031258.1-201ENST00000623562 325 ntBASIC29.68■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms