Protein–RNA interactions for Protein: Q9NPA1

KCNMB3, Calcium-activated potassium channel subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMB3Q9NPA1 MLEC-202ENST00000412616 841 ntTSL 3 BASIC29.41■■■□□ 2.3
KCNMB3Q9NPA1 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC29.41■■■□□ 2.3
KCNMB3Q9NPA1 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC29.41■■■□□ 2.3
KCNMB3Q9NPA1 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
KCNMB3Q9NPA1 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
KCNMB3Q9NPA1 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
KCNMB3Q9NPA1 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC29.4■■■□□ 2.3
KCNMB3Q9NPA1 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC29.4■■■□□ 2.3
KCNMB3Q9NPA1 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC29.4■■■□□ 2.3
KCNMB3Q9NPA1 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
KCNMB3Q9NPA1 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
KCNMB3Q9NPA1 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
KCNMB3Q9NPA1 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
KCNMB3Q9NPA1 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC29.38■■■□□ 2.29
KCNMB3Q9NPA1 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
KCNMB3Q9NPA1 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
KCNMB3Q9NPA1 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
KCNMB3Q9NPA1 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC29.37■■■□□ 2.29
KCNMB3Q9NPA1 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
KCNMB3Q9NPA1 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC29.37■■■□□ 2.29
KCNMB3Q9NPA1 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
KCNMB3Q9NPA1 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
KCNMB3Q9NPA1 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
KCNMB3Q9NPA1 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC29.35■■■□□ 2.29
KCNMB3Q9NPA1 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
KCNMB3Q9NPA1 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
KCNMB3Q9NPA1 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
KCNMB3Q9NPA1 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
KCNMB3Q9NPA1 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
KCNMB3Q9NPA1 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
KCNMB3Q9NPA1 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
KCNMB3Q9NPA1 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC29.32■■■□□ 2.28
KCNMB3Q9NPA1 ABHD17AP4-201ENST00000411545 909 ntBASIC29.32■■■□□ 2.28
KCNMB3Q9NPA1 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC29.31■■■□□ 2.28
KCNMB3Q9NPA1 LINC00273-201ENST00000539813 1452 ntBASIC29.31■■■□□ 2.28
KCNMB3Q9NPA1 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC29.31■■■□□ 2.28
KCNMB3Q9NPA1 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
KCNMB3Q9NPA1 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC29.31■■■□□ 2.28
KCNMB3Q9NPA1 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC29.31■■■□□ 2.28
KCNMB3Q9NPA1 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC29.31■■■□□ 2.28
KCNMB3Q9NPA1 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC29.3■■■□□ 2.28
KCNMB3Q9NPA1 CALM3-209ENST00000597743 577 ntTSL 4 BASIC29.3■■■□□ 2.28
KCNMB3Q9NPA1 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
KCNMB3Q9NPA1 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC29.29■■■□□ 2.28
KCNMB3Q9NPA1 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC29.27■■■□□ 2.28
KCNMB3Q9NPA1 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC29.27■■■□□ 2.28
KCNMB3Q9NPA1 AL139393.2-201ENST00000608721 2025 ntBASIC29.27■■■□□ 2.28
KCNMB3Q9NPA1 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC29.27■■■□□ 2.28
KCNMB3Q9NPA1 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC29.27■■■□□ 2.28
KCNMB3Q9NPA1 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC29.27■■■□□ 2.28
KCNMB3Q9NPA1 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
KCNMB3Q9NPA1 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
KCNMB3Q9NPA1 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
KCNMB3Q9NPA1 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
KCNMB3Q9NPA1 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC29.25■■■□□ 2.27
KCNMB3Q9NPA1 ZNRF2P2-203ENST00000454624 420 ntBASIC29.25■■■□□ 2.27
KCNMB3Q9NPA1 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC29.24■■■□□ 2.27
KCNMB3Q9NPA1 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC29.23■■■□□ 2.27
KCNMB3Q9NPA1 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC29.23■■■□□ 2.27
KCNMB3Q9NPA1 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
KCNMB3Q9NPA1 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC29.23■■■□□ 2.27
KCNMB3Q9NPA1 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
KCNMB3Q9NPA1 AC135983.2-203ENST00000454486 1613 ntBASIC29.23■■■□□ 2.27
KCNMB3Q9NPA1 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC29.22■■■□□ 2.27
KCNMB3Q9NPA1 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC29.2■■■□□ 2.27
KCNMB3Q9NPA1 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
KCNMB3Q9NPA1 ABCB10P3-201ENST00000561950 2166 ntBASIC29.19■■■□□ 2.26
KCNMB3Q9NPA1 AP004833.2-201ENST00000532228 1454 ntBASIC29.19■■■□□ 2.26
KCNMB3Q9NPA1 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC29.19■■■□□ 2.26
KCNMB3Q9NPA1 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC29.19■■■□□ 2.26
KCNMB3Q9NPA1 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC29.19■■■□□ 2.26
KCNMB3Q9NPA1 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC29.19■■■□□ 2.26
KCNMB3Q9NPA1 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
KCNMB3Q9NPA1 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC29.18■■■□□ 2.26
KCNMB3Q9NPA1 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC29.18■■■□□ 2.26
KCNMB3Q9NPA1 WHAMMP2-203ENST00000563942 1603 ntBASIC29.17■■■□□ 2.26
KCNMB3Q9NPA1 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC29.17■■■□□ 2.26
KCNMB3Q9NPA1 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
KCNMB3Q9NPA1 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC29.16■■■□□ 2.26
KCNMB3Q9NPA1 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC29.16■■■□□ 2.26
KCNMB3Q9NPA1 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
KCNMB3Q9NPA1 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
KCNMB3Q9NPA1 LINC01971-201ENST00000617888 1048 ntBASIC29.14■■■□□ 2.26
KCNMB3Q9NPA1 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
KCNMB3Q9NPA1 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC29.13■■■□□ 2.25
KCNMB3Q9NPA1 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC29.13■■■□□ 2.25
KCNMB3Q9NPA1 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC29.13■■■□□ 2.25
KCNMB3Q9NPA1 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC29.13■■■□□ 2.25
KCNMB3Q9NPA1 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
KCNMB3Q9NPA1 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
KCNMB3Q9NPA1 AC139426.1-201ENST00000568218 2529 ntBASIC29.11■■■□□ 2.25
KCNMB3Q9NPA1 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
KCNMB3Q9NPA1 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC29.11■■■□□ 2.25
KCNMB3Q9NPA1 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC29.11■■■□□ 2.25
KCNMB3Q9NPA1 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC29.11■■■□□ 2.25
KCNMB3Q9NPA1 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC29.1■■■□□ 2.25
KCNMB3Q9NPA1 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
KCNMB3Q9NPA1 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC29.1■■■□□ 2.25
KCNMB3Q9NPA1 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
KCNMB3Q9NPA1 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC29.08■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms