Protein–RNA interactions for Protein: Q9BWW7

SCRT1, Transcriptional repressor scratch 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1Q9BWW7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCRT1Q9BWW7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCRT1Q9BWW7 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SCRT1Q9BWW7 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCRT1Q9BWW7 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCRT1Q9BWW7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
SCRT1Q9BWW7 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCRT1Q9BWW7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.72■□□□□ 0.91
SCRT1Q9BWW7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
SCRT1Q9BWW7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
SCRT1Q9BWW7 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCRT1Q9BWW7 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC20.72■□□□□ 0.91
SCRT1Q9BWW7 AP002365.1-201ENST00000603448 772 ntBASIC20.72■□□□□ 0.91
SCRT1Q9BWW7 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC20.72■□□□□ 0.91
SCRT1Q9BWW7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
SCRT1Q9BWW7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCRT1Q9BWW7 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCRT1Q9BWW7 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCRT1Q9BWW7 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SCRT1Q9BWW7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCRT1Q9BWW7 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCRT1Q9BWW7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.7■□□□□ 0.9
SCRT1Q9BWW7 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCRT1Q9BWW7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SCRT1Q9BWW7 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.69■□□□□ 0.9
SCRT1Q9BWW7 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
SCRT1Q9BWW7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.69■□□□□ 0.9
SCRT1Q9BWW7 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCRT1Q9BWW7 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCRT1Q9BWW7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCRT1Q9BWW7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCRT1Q9BWW7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.67■□□□□ 0.9
SCRT1Q9BWW7 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCRT1Q9BWW7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCRT1Q9BWW7 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCRT1Q9BWW7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCRT1Q9BWW7 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCRT1Q9BWW7 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
SCRT1Q9BWW7 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCRT1Q9BWW7 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SCRT1Q9BWW7 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SCRT1Q9BWW7 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SCRT1Q9BWW7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCRT1Q9BWW7 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCRT1Q9BWW7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCRT1Q9BWW7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCRT1Q9BWW7 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCRT1Q9BWW7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SCRT1Q9BWW7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
SCRT1Q9BWW7 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SCRT1Q9BWW7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCRT1Q9BWW7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCRT1Q9BWW7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.61■□□□□ 0.89
SCRT1Q9BWW7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.61■□□□□ 0.89
SCRT1Q9BWW7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCRT1Q9BWW7 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCRT1Q9BWW7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.61■□□□□ 0.89
SCRT1Q9BWW7 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SCRT1Q9BWW7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCRT1Q9BWW7 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.6■□□□□ 0.89
SCRT1Q9BWW7 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC20.59■□□□□ 0.89
SCRT1Q9BWW7 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SCRT1Q9BWW7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.59■□□□□ 0.89
SCRT1Q9BWW7 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.59■□□□□ 0.89
SCRT1Q9BWW7 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SCRT1Q9BWW7 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SCRT1Q9BWW7 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.59■□□□□ 0.89
SCRT1Q9BWW7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.58■□□□□ 0.89
SCRT1Q9BWW7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
SCRT1Q9BWW7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SCRT1Q9BWW7 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SCRT1Q9BWW7 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC20.58■□□□□ 0.89
SCRT1Q9BWW7 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SCRT1Q9BWW7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SCRT1Q9BWW7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SCRT1Q9BWW7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SCRT1Q9BWW7 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCRT1Q9BWW7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.57■□□□□ 0.88
SCRT1Q9BWW7 BX255925.1-201ENST00000566954 1854 ntBASIC20.56■□□□□ 0.88
SCRT1Q9BWW7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SCRT1Q9BWW7 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCRT1Q9BWW7 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCRT1Q9BWW7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCRT1Q9BWW7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCRT1Q9BWW7 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SCRT1Q9BWW7 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCRT1Q9BWW7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCRT1Q9BWW7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCRT1Q9BWW7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.54■□□□□ 0.88
SCRT1Q9BWW7 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SCRT1Q9BWW7 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SCRT1Q9BWW7 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
SCRT1Q9BWW7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SCRT1Q9BWW7 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.53■□□□□ 0.88
SCRT1Q9BWW7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SCRT1Q9BWW7 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
SCRT1Q9BWW7 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.52■□□□□ 0.88
SCRT1Q9BWW7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SCRT1Q9BWW7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SCRT1Q9BWW7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms