RNA–Protein interactions for RNA: ENST00000596802.5

SIN3B-209, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 1 (best) BASIC

Gene SIN3B, Length 2,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-209ENST00000596802 NISCHQ9Y2I1 1504 aa43.11■■■■■ 4.49
SIN3B-209ENST00000596802 HRCP23327 699 aa38.89■■■■□ 3.82
SIN3B-209ENST00000596802 SHROOM4Q9ULL8 1493 aa38.06■■■■□ 3.68
SIN3B-209ENST00000596802 PPARGC1BQ86YN6 1023 aaKnown RBP37.97■■■■□ 3.67
SIN3B-209ENST00000596802 SUPT5HO00267 1087 aaKnown RBP37.96■■■■□ 3.67
SIN3B-209ENST00000596802 PCGF6Q9BYE7 350 aa37.92■■■■□ 3.66
SIN3B-209ENST00000596802 MYO15BQ96JP2 1530 aa37.9■■■■□ 3.66
SIN3B-209ENST00000596802 PELP1Q8IZL8 1130 aaKnown RBP37.71■■■■□ 3.63
SIN3B-209ENST00000596802 CHIC1Q5VXU3 224 aa37.55■■■■□ 3.6
SIN3B-209ENST00000596802 DCAF1Q9Y4B6 1507 aa37.2■■■■□ 3.54
SIN3B-209ENST00000596802 SCAF1Q9H7N4 1312 aaKnown RBP36.83■■■■□ 3.49
SIN3B-209ENST00000596802 CCDC180Q9P1Z9 1646 aa36.78■■■■□ 3.48
SIN3B-209ENST00000596802 ZCCHC6Q5VYS8 1495 aaKnown RBP36.76■■■■□ 3.47
SIN3B-209ENST00000596802 TRIM26Q12899 539 aaPredicted RBP36.75■■■■□ 3.47
SIN3B-209ENST00000596802 LOC105371045A0A1W2PR82 267 aa36.6■■■■□ 3.45
SIN3B-209ENST00000596802 ZEB1P37275 1124 aaPredicted RBP36.52■■■■□ 3.44
SIN3B-209ENST00000596802 MYT1Q01538 1121 aa36.27■■■■□ 3.4
SIN3B-209ENST00000596802 ACIN1Q9UKV3 1341 aaKnown RBP35.9■■■■□ 3.34
SIN3B-209ENST00000596802 NEUROD1Q13562 356 aa35.77■■■■□ 3.32
SIN3B-209ENST00000596802 GTF3C3Q9Y5Q9 886 aa35.56■■■■□ 3.28
SIN3B-209ENST00000596802 DCAF8L2P0C7V8 631 aa35.53■■■■□ 3.28
SIN3B-209ENST00000596802 CENPBP07199 599 aaPredicted RBP35.38■■■■□ 3.25
SIN3B-209ENST00000596802 DIEXFQ68CQ4 756 aaKnown RBP35.18■■■■□ 3.22
SIN3B-209ENST00000596802 TRIM41Q8WV44 630 aa35.14■■■■□ 3.22
SIN3B-209ENST00000596802 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.1■■■■□ 3.21
SIN3B-209ENST00000596802 FAM9AQ8IZU1 332 aaPredicted RBP35.06■■■■□ 3.2
SIN3B-209ENST00000596802 CCER1Q8TC90 406 aaPredicted RBP35.04■■■■□ 3.2
SIN3B-209ENST00000596802 ABCC9O60706 1549 aa35■■■■□ 3.19
SIN3B-209ENST00000596802 EHMT2Q96KQ7 1210 aa34.82■■■■□ 3.16
SIN3B-209ENST00000596802 RSF1Q96T23 1441 aaPredicted RBP34.74■■■■□ 3.15
SIN3B-209ENST00000596802 RB1CC1Q8TDY2 1594 aa34.66■■■■□ 3.14
SIN3B-209ENST00000596802 YTHDC1Q96MU7 727 aaKnown RBP34.52■■■■□ 3.12
SIN3B-209ENST00000596802 ZNF316A6NFI3 1004 aaPredicted RBP34.5■■■■□ 3.11
SIN3B-209ENST00000596802 MIER1Q8N108 512 aa34.27■■■■□ 3.08
SIN3B-209ENST00000596802 WRNQ14191 1432 aaPredicted RBP eCLIP34.17■■■■□ 3.06
SIN3B-209ENST00000596802 TTBK1Q5TCY1 1321 aaPredicted RBP34.08■■■■□ 3.05
SIN3B-209ENST00000596802 SCRIBQ14160 1630 aa34.06■■■■□ 3.04
SIN3B-209ENST00000596802 NACADO15069 1562 aa33.93■■■■□ 3.02
SIN3B-209ENST00000596802 ANP32EQ9BTT0 268 aa33.9■■■■□ 3.02
SIN3B-209ENST00000596802 BCL11AQ9H165 835 aa33.89■■■■□ 3.02
SIN3B-209ENST00000596802 CLSPNQ9HAW4 1339 aa33.89■■■■□ 3.02
SIN3B-209ENST00000596802 SUPT16HQ9Y5B9 1047 aaKnown RBP33.87■■■■□ 3.01
SIN3B-209ENST00000596802 CEP162Q5TB80 1403 aa33.86■■■■□ 3.01
SIN3B-209ENST00000596802 TSHZ2Q9NRE2 1034 aa33.76■■■■□ 3
SIN3B-209ENST00000596802 EIF4G1Q04637 1599 aaKnown RBP33.73■■■□□ 2.99
SIN3B-209ENST00000596802 MROH2BQ7Z745 1585 aa33.68■■■□□ 2.98
SIN3B-209ENST00000596802 CECR2Q9BXF3 1484 aa33.68■■■□□ 2.98
SIN3B-209ENST00000596802 TNIKQ9UKE5 1360 aa33.64■■■□□ 2.98
SIN3B-209ENST00000596802 WIZO95785 1651 aa33.59■■■□□ 2.97
SIN3B-209ENST00000596802 CSRNP3Q8WYN3 585 aa33.51■■■□□ 2.95
SIN3B-209ENST00000596802 CCDC88BA6NC98 1476 aa33.5■■■□□ 2.95
SIN3B-209ENST00000596802 HNRNPUL2Q1KMD3 747 aaKnown RBP33.48■■■□□ 2.95
SIN3B-209ENST00000596802 ABCC8Q09428 1581 aa33.43■■■□□ 2.94
SIN3B-209ENST00000596802 BAZ1AQ9NRL2 1556 aaPredicted RBP33.41■■■□□ 2.94
SIN3B-209ENST00000596802 SOGA1O94964 1423 aa33.38■■■□□ 2.93
SIN3B-209ENST00000596802 UBTFP17480 764 aaKnown RBP33.28■■■□□ 2.92
SIN3B-209ENST00000596802 EEA1Q15075 1411 aa33.25■■■□□ 2.91
SIN3B-209ENST00000596802 GOLGA3Q08378 1498 aa33.19■■■□□ 2.9
SIN3B-209ENST00000596802 RUSC2Q8N2Y8 1516 aa33.17■■■□□ 2.9
SIN3B-209ENST00000596802 UNC13AQ9UPW8 1703 aa33.11■■■□□ 2.89
SIN3B-209ENST00000596802 DHX57Q6P158 1386 aaKnown RBP33.01■■■□□ 2.87
SIN3B-209ENST00000596802 BCANQ96GW7 911 aa33■■■□□ 2.87
SIN3B-209ENST00000596802 TOP2AP11388 1531 aaKnown RBP32.96■■■□□ 2.87
SIN3B-209ENST00000596802 VPS8Q8N3P4 1428 aa32.94■■■□□ 2.86
SIN3B-209ENST00000596802 RBM19Q9Y4C8 960 aaKnown RBP32.94■■■□□ 2.86
SIN3B-209ENST00000596802 CLIP1P30622 1438 aa32.92■■■□□ 2.86
SIN3B-209ENST00000596802 SMARCA2P51531 1590 aa32.89■■■□□ 2.86
SIN3B-209ENST00000596802 KCNH8Q96L42 1107 aa32.89■■■□□ 2.86
SIN3B-209ENST00000596802 FKBP8Q14318 412 aa32.88■■■□□ 2.85
SIN3B-209ENST00000596802 BICRAQ9NZM4 1560 aa32.88■■■□□ 2.85
SIN3B-209ENST00000596802 PABPN1Q86U42 306 aaKnown RBP eCLIP32.87■■■□□ 2.85
SIN3B-209ENST00000596802 CEP164Q9UPV0 1460 aa32.83■■■□□ 2.85
SIN3B-209ENST00000596802 APLP2Q06481 763 aa32.8■■■□□ 2.84
SIN3B-209ENST00000596802 KIF21BO75037 1637 aa32.79■■■□□ 2.84
SIN3B-209ENST00000596802 MSH5O43196 834 aa32.68■■■□□ 2.82
SIN3B-209ENST00000596802 BAZ1BQ9UIG0 1483 aaKnown RBP32.59■■■□□ 2.81
SIN3B-209ENST00000596802 NEFLP07196 543 aa32.59■■■□□ 2.81
SIN3B-209ENST00000596802 SMARCA4P51532 1647 aa32.54■■■□□ 2.8
SIN3B-209ENST00000596802 ITGAEP38570 1179 aa32.54■■■□□ 2.8
SIN3B-209ENST00000596802 PRKCSHP14314 528 aaPredicted RBP32.51■■■□□ 2.79
SIN3B-209ENST00000596802 RAPGEF2Q9Y4G8 1499 aa32.47■■■□□ 2.79
SIN3B-209ENST00000596802 CUX2O14529 1486 aa32.46■■■□□ 2.79
SIN3B-209ENST00000596802 FANCIQ9NVI1 1328 aa32.44■■■□□ 2.78
SIN3B-209ENST00000596802 SYNJ1O43426 1573 aa32.4■■■□□ 2.78
SIN3B-209ENST00000596802 RRBP1Q9P2E9 1410 aaKnown RBP32.39■■■□□ 2.78
SIN3B-209ENST00000596802 RANGAP1P46060 587 aaPredicted RBP32.37■■■□□ 2.77
SIN3B-209ENST00000596802 DDX10Q13206 875 aaKnown RBP32.36■■■□□ 2.77
SIN3B-209ENST00000596802 KANK4Q5T7N3 995 aaPredicted RBP32.32■■■□□ 2.76
SIN3B-209ENST00000596802 TRIM52Q96A61 297 aa32.3■■■□□ 2.76
SIN3B-209ENST00000596802 ERICH6Q7L0X2 663 aa32.27■■■□□ 2.76
SIN3B-209ENST00000596802 MAPKBP1O60336 1514 aa32.27■■■□□ 2.76
SIN3B-209ENST00000596802 PPP1R15AO75807 674 aaPredicted RBP32.25■■■□□ 2.75
SIN3B-209ENST00000596802 CCER2I3L3R5 266 aa32.23■■■□□ 2.75
SIN3B-209ENST00000596802 ARAP1Q96P48 1450 aa32.23■■■□□ 2.75
SIN3B-209ENST00000596802 MYT1LQ9UL68 1186 aa32.2■■■□□ 2.75
SIN3B-209ENST00000596802 WDR97A6NE52 1622 aa32.18■■■□□ 2.74
SIN3B-209ENST00000596802 CCNB3Q8WWL7 1395 aa32.17■■■□□ 2.74
SIN3B-209ENST00000596802 CDK11AQ9UQ88 783 aaPredicted RBP32.14■■■□□ 2.74
SIN3B-209ENST00000596802 RAB3GAP2Q9H2M9 1393 aa32.13■■■□□ 2.73
SIN3B-209ENST00000596802 DEKP35659 375 aaKnown RBP32.1■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms