RNA–Protein interactions for RNA: ENST00000264938.7

SLC9A3-201, Transcript of solute carrier family 9 member A3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLC9A3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3-201ENST00000264938 NISCHQ9Y2I1 1504 aa45.09■■■■■ 4.81
SLC9A3-201ENST00000264938 SHROOM4Q9ULL8 1493 aa39.63■■■■□ 3.93
SLC9A3-201ENST00000264938 SUPT5HO00267 1087 aaKnown RBP39.32■■■■□ 3.89
SLC9A3-201ENST00000264938 HRCP23327 699 aa39.22■■■■□ 3.87
SLC9A3-201ENST00000264938 MYO15BQ96JP2 1530 aa38.84■■■■□ 3.81
SLC9A3-201ENST00000264938 CHIC1Q5VXU3 224 aa38.62■■■■□ 3.77
SLC9A3-201ENST00000264938 PCGF6Q9BYE7 350 aa38.62■■■■□ 3.77
SLC9A3-201ENST00000264938 PPARGC1BQ86YN6 1023 aaKnown RBP38.49■■■■□ 3.75
SLC9A3-201ENST00000264938 ZCCHC6Q5VYS8 1495 aaKnown RBP38.32■■■■□ 3.72
SLC9A3-201ENST00000264938 DCAF1Q9Y4B6 1507 aa37.82■■■■□ 3.65
SLC9A3-201ENST00000264938 LOC105371045A0A1W2PR82 267 aa37.72■■■■□ 3.63
SLC9A3-201ENST00000264938 CCDC180Q9P1Z9 1646 aa37.61■■■■□ 3.61
SLC9A3-201ENST00000264938 DCAF8L2P0C7V8 631 aa37.51■■■■□ 3.6
SLC9A3-201ENST00000264938 TRIM26Q12899 539 aaPredicted RBP37.44■■■■□ 3.58
SLC9A3-201ENST00000264938 PELP1Q8IZL8 1130 aaKnown RBP37.11■■■■□ 3.53
SLC9A3-201ENST00000264938 ZEB1P37275 1124 aaPredicted RBP36.93■■■■□ 3.5
SLC9A3-201ENST00000264938 SCAF1Q9H7N4 1312 aaKnown RBP36.93■■■■□ 3.5
SLC9A3-201ENST00000264938 TRIM41Q8WV44 630 aa36.39■■■■□ 3.42
SLC9A3-201ENST00000264938 FAM9AQ8IZU1 332 aaPredicted RBP36.37■■■■□ 3.41
SLC9A3-201ENST00000264938 ABCC9O60706 1549 aa36.34■■■■□ 3.41
SLC9A3-201ENST00000264938 EHMT2Q96KQ7 1210 aa36.21■■■■□ 3.39
SLC9A3-201ENST00000264938 RSF1Q96T23 1441 aaPredicted RBP36.19■■■■□ 3.38
SLC9A3-201ENST00000264938 ACIN1Q9UKV3 1341 aaKnown RBP36.09■■■■□ 3.37
SLC9A3-201ENST00000264938 NEUROD1Q13562 356 aa36.06■■■■□ 3.36
SLC9A3-201ENST00000264938 RB1CC1Q8TDY2 1594 aa36.01■■■■□ 3.36
SLC9A3-201ENST00000264938 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.93■■■■□ 3.34
SLC9A3-201ENST00000264938 CCER1Q8TC90 406 aaPredicted RBP35.79■■■■□ 3.32
SLC9A3-201ENST00000264938 GTF3C3Q9Y5Q9 886 aa35.79■■■■□ 3.32
SLC9A3-201ENST00000264938 SCRIBQ14160 1630 aa35.79■■■■□ 3.32
SLC9A3-201ENST00000264938 DIEXFQ68CQ4 756 aaKnown RBP35.68■■■■□ 3.3
SLC9A3-201ENST00000264938 CENPBP07199 599 aaPredicted RBP35.59■■■■□ 3.29
SLC9A3-201ENST00000264938 MYT1Q01538 1121 aa35.47■■■■□ 3.27
SLC9A3-201ENST00000264938 CECR2Q9BXF3 1484 aa35.31■■■■□ 3.24
SLC9A3-201ENST00000264938 TTBK1Q5TCY1 1321 aaPredicted RBP35.28■■■■□ 3.24
SLC9A3-201ENST00000264938 MROH2BQ7Z745 1585 aa35.24■■■■□ 3.23
SLC9A3-201ENST00000264938 WIZO95785 1651 aa35.12■■■■□ 3.21
SLC9A3-201ENST00000264938 ZNF316A6NFI3 1004 aaPredicted RBP35.08■■■■□ 3.21
SLC9A3-201ENST00000264938 YTHDC1Q96MU7 727 aaKnown RBP35.06■■■■□ 3.2
SLC9A3-201ENST00000264938 WRNQ14191 1432 aaPredicted RBP eCLIP35.05■■■■□ 3.2
SLC9A3-201ENST00000264938 EIF4G1Q04637 1599 aaKnown RBP34.97■■■■□ 3.19
SLC9A3-201ENST00000264938 CEP162Q5TB80 1403 aa34.92■■■■□ 3.18
SLC9A3-201ENST00000264938 MIER1Q8N108 512 aa34.85■■■■□ 3.17
SLC9A3-201ENST00000264938 CCDC88BA6NC98 1476 aa34.81■■■■□ 3.16
SLC9A3-201ENST00000264938 BAZ1AQ9NRL2 1556 aaPredicted RBP34.8■■■■□ 3.16
SLC9A3-201ENST00000264938 ABCC8Q09428 1581 aa34.79■■■■□ 3.16
SLC9A3-201ENST00000264938 TNIKQ9UKE5 1360 aa34.71■■■■□ 3.15
SLC9A3-201ENST00000264938 SOGA1O94964 1423 aa34.68■■■■□ 3.14
SLC9A3-201ENST00000264938 NACADO15069 1562 aa34.59■■■■□ 3.13
SLC9A3-201ENST00000264938 UBTFP17480 764 aaKnown RBP34.56■■■■□ 3.12
SLC9A3-201ENST00000264938 HNRNPUL2Q1KMD3 747 aaKnown RBP34.52■■■■□ 3.12
SLC9A3-201ENST00000264938 RUSC2Q8N2Y8 1516 aa34.51■■■■□ 3.12
SLC9A3-201ENST00000264938 CSRNP3Q8WYN3 585 aa34.5■■■■□ 3.11
SLC9A3-201ENST00000264938 TOP2AP11388 1531 aaKnown RBP34.39■■■■□ 3.1
SLC9A3-201ENST00000264938 EEA1Q15075 1411 aa34.33■■■■□ 3.09
SLC9A3-201ENST00000264938 SMARCA2P51531 1590 aa34.32■■■■□ 3.09
SLC9A3-201ENST00000264938 GOLGA3Q08378 1498 aa34.29■■■■□ 3.08
SLC9A3-201ENST00000264938 SUPT16HQ9Y5B9 1047 aaKnown RBP34.17■■■■□ 3.06
SLC9A3-201ENST00000264938 SMARCA4P51532 1647 aa34.11■■■■□ 3.05
SLC9A3-201ENST00000264938 CLIP1P30622 1438 aa34.03■■■■□ 3.04
SLC9A3-201ENST00000264938 CLSPNQ9HAW4 1339 aa33.98■■■■□ 3.03
SLC9A3-201ENST00000264938 VPS8Q8N3P4 1428 aa33.97■■■■□ 3.03
SLC9A3-201ENST00000264938 CEP164Q9UPV0 1460 aa33.97■■■■□ 3.03
SLC9A3-201ENST00000264938 TSHZ2Q9NRE2 1034 aa33.93■■■■□ 3.02
SLC9A3-201ENST00000264938 APLP2Q06481 763 aa33.9■■■■□ 3.02
SLC9A3-201ENST00000264938 KIF21BO75037 1637 aa33.89■■■■□ 3.02
SLC9A3-201ENST00000264938 DHX57Q6P158 1386 aaKnown RBP33.84■■■■□ 3.01
SLC9A3-201ENST00000264938 RANGAP1P46060 587 aaPredicted RBP33.82■■■■□ 3.01
SLC9A3-201ENST00000264938 SYNJ1O43426 1573 aa33.77■■■■□ 3
SLC9A3-201ENST00000264938 ANP32EQ9BTT0 268 aa33.76■■■■□ 3
SLC9A3-201ENST00000264938 RAPGEF2Q9Y4G8 1499 aa33.74■■■□□ 2.99
SLC9A3-201ENST00000264938 BAZ1BQ9UIG0 1483 aaKnown RBP33.67■■■□□ 2.98
SLC9A3-201ENST00000264938 KCNH8Q96L42 1107 aa33.62■■■□□ 2.97
SLC9A3-201ENST00000264938 UNC13AQ9UPW8 1703 aa33.56■■■□□ 2.96
SLC9A3-201ENST00000264938 KANK4Q5T7N3 995 aaPredicted RBP33.52■■■□□ 2.96
SLC9A3-201ENST00000264938 BCANQ96GW7 911 aa33.49■■■□□ 2.95
SLC9A3-201ENST00000264938 BCL11AQ9H165 835 aa33.43■■■□□ 2.94
SLC9A3-201ENST00000264938 ARAP1Q96P48 1450 aa33.37■■■□□ 2.93
SLC9A3-201ENST00000264938 FKBP8Q14318 412 aa33.33■■■□□ 2.93
SLC9A3-201ENST00000264938 RRBP1Q9P2E9 1410 aaKnown RBP33.33■■■□□ 2.93
SLC9A3-201ENST00000264938 PEG3Q9GZU2 1588 aa33.27■■■□□ 2.92
SLC9A3-201ENST00000264938 CUX2O14529 1486 aa33.26■■■□□ 2.92
SLC9A3-201ENST00000264938 PABPN1Q86U42 306 aaKnown RBP eCLIP33.26■■■□□ 2.91
SLC9A3-201ENST00000264938 ITGAEP38570 1179 aa33.23■■■□□ 2.91
SLC9A3-201ENST00000264938 CCNB3Q8WWL7 1395 aa33.18■■■□□ 2.9
SLC9A3-201ENST00000264938 DDX10Q13206 875 aaKnown RBP33.16■■■□□ 2.9
SLC9A3-201ENST00000264938 RBM19Q9Y4C8 960 aaKnown RBP33.16■■■□□ 2.9
SLC9A3-201ENST00000264938 PRXQ9BXM0 1461 aa33.15■■■□□ 2.9
SLC9A3-201ENST00000264938 TOP2BQ02880 1626 aa33.14■■■□□ 2.9
SLC9A3-201ENST00000264938 ERICH3Q5RHP9 1530 aa33.13■■■□□ 2.89
SLC9A3-201ENST00000264938 MAPKBP1O60336 1514 aa33.12■■■□□ 2.89
SLC9A3-201ENST00000264938 RAB3GAP2Q9H2M9 1393 aa33.09■■■□□ 2.89
SLC9A3-201ENST00000264938 BICRAQ9NZM4 1560 aa33.07■■■□□ 2.88
SLC9A3-201ENST00000264938 ATAD2BQ9ULI0 1458 aa33.03■■■□□ 2.88
SLC9A3-201ENST00000264938 WDR97A6NE52 1622 aa33■■■□□ 2.87
SLC9A3-201ENST00000264938 PPP1R15AO75807 674 aaPredicted RBP32.97■■■□□ 2.87
SLC9A3-201ENST00000264938 NEFLP07196 543 aa32.97■■■□□ 2.87
SLC9A3-201ENST00000264938 TRIM52Q96A61 297 aa32.97■■■□□ 2.87
SLC9A3-201ENST00000264938 SIN3AQ96ST3 1273 aa32.97■■■□□ 2.87
SLC9A3-201ENST00000264938 BIVM-ERCC5R4GMW8 1640 aa32.96■■■□□ 2.87
SLC9A3-201ENST00000264938 HIRIP3Q9BW71 556 aaPredicted RBP32.91■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms