Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
PGBD3Q8N328 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.82
PGBD3Q8N328 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
PGBD3Q8N328 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.45■■□□□ 1.82
PGBD3Q8N328 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
PGBD3Q8N328 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PGBD3Q8N328 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
PGBD3Q8N328 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
PGBD3Q8N328 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PGBD3Q8N328 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
PGBD3Q8N328 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PGBD3Q8N328 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PGBD3Q8N328 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PGBD3Q8N328 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PGBD3Q8N328 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PGBD3Q8N328 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.42■■□□□ 1.82
PGBD3Q8N328 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.42■■□□□ 1.82
PGBD3Q8N328 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
PGBD3Q8N328 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PGBD3Q8N328 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PGBD3Q8N328 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.39■■□□□ 1.82
PGBD3Q8N328 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.39■■□□□ 1.81
PGBD3Q8N328 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.38■■□□□ 1.81
PGBD3Q8N328 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.38■■□□□ 1.81
PGBD3Q8N328 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
PGBD3Q8N328 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
PGBD3Q8N328 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PGBD3Q8N328 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
PGBD3Q8N328 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.36■■□□□ 1.81
PGBD3Q8N328 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.36■■□□□ 1.81
PGBD3Q8N328 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.36■■□□□ 1.81
PGBD3Q8N328 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
PGBD3Q8N328 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC26.35■■□□□ 1.81
PGBD3Q8N328 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
PGBD3Q8N328 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PGBD3Q8N328 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.35■■□□□ 1.81
PGBD3Q8N328 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PGBD3Q8N328 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PGBD3Q8N328 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PGBD3Q8N328 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PGBD3Q8N328 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PGBD3Q8N328 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PGBD3Q8N328 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
PGBD3Q8N328 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.34■■□□□ 1.81
PGBD3Q8N328 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
PGBD3Q8N328 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
PGBD3Q8N328 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PGBD3Q8N328 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PGBD3Q8N328 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
PGBD3Q8N328 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
PGBD3Q8N328 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.32■■□□□ 1.8
PGBD3Q8N328 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
PGBD3Q8N328 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.31■■□□□ 1.8
PGBD3Q8N328 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.31■■□□□ 1.8
PGBD3Q8N328 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PGBD3Q8N328 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.3■■□□□ 1.8
PGBD3Q8N328 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.3■■□□□ 1.8
PGBD3Q8N328 AC010864.1-201ENST00000609407 1511 ntBASIC26.29■■□□□ 1.8
PGBD3Q8N328 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
PGBD3Q8N328 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PGBD3Q8N328 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
PGBD3Q8N328 LINC00273-201ENST00000539813 1452 ntBASIC26.28■■□□□ 1.8
PGBD3Q8N328 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PGBD3Q8N328 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
PGBD3Q8N328 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.27■■□□□ 1.8
PGBD3Q8N328 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PGBD3Q8N328 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PGBD3Q8N328 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PGBD3Q8N328 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
PGBD3Q8N328 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.26■■□□□ 1.79
PGBD3Q8N328 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.26■■□□□ 1.79
PGBD3Q8N328 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.25■■□□□ 1.79
PGBD3Q8N328 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PGBD3Q8N328 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PGBD3Q8N328 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.24■■□□□ 1.79
PGBD3Q8N328 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.24■■□□□ 1.79
PGBD3Q8N328 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC26.24■■□□□ 1.79
PGBD3Q8N328 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PGBD3Q8N328 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.23■■□□□ 1.79
PGBD3Q8N328 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.22■■□□□ 1.79
PGBD3Q8N328 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
PGBD3Q8N328 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
PGBD3Q8N328 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PGBD3Q8N328 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PGBD3Q8N328 GPX1-201ENST00000419349 1106 ntBASIC26.2■■□□□ 1.78
PGBD3Q8N328 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC26.2■■□□□ 1.78
PGBD3Q8N328 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC26.2■■□□□ 1.78
PGBD3Q8N328 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
PGBD3Q8N328 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
PGBD3Q8N328 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PGBD3Q8N328 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PGBD3Q8N328 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PGBD3Q8N328 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.19■■□□□ 1.78
PGBD3Q8N328 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PGBD3Q8N328 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PGBD3Q8N328 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
PGBD3Q8N328 CEP120-209ENST00000515110 606 ntTSL 3 BASIC26.18■■□□□ 1.78
PGBD3Q8N328 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.18■■□□□ 1.78
PGBD3Q8N328 RARRES2P2-201ENST00000394842 485 ntBASIC26.17■■□□□ 1.78
PGBD3Q8N328 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms