Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
VPS13BQ7Z7G8 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VPS13BQ7Z7G8 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VPS13BQ7Z7G8 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
VPS13BQ7Z7G8 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VPS13BQ7Z7G8 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC16.35■□□□□ 0.21
VPS13BQ7Z7G8 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
VPS13BQ7Z7G8 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VPS13BQ7Z7G8 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS13BQ7Z7G8 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC16.35■□□□□ 0.21
VPS13BQ7Z7G8 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
VPS13BQ7Z7G8 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS13BQ7Z7G8 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VPS13BQ7Z7G8 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC16.34■□□□□ 0.21
VPS13BQ7Z7G8 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VPS13BQ7Z7G8 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS13BQ7Z7G8 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
VPS13BQ7Z7G8 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS13BQ7Z7G8 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VPS13BQ7Z7G8 TPT1-202ENST00000379055 948 ntTSL 2 BASIC16.33■□□□□ 0.2
VPS13BQ7Z7G8 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC16.33■□□□□ 0.2
VPS13BQ7Z7G8 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
VPS13BQ7Z7G8 CEP120-209ENST00000515110 606 ntTSL 3 BASIC16.32■□□□□ 0.2
VPS13BQ7Z7G8 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VPS13BQ7Z7G8 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC16.32■□□□□ 0.2
VPS13BQ7Z7G8 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VPS13BQ7Z7G8 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
VPS13BQ7Z7G8 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC16.31■□□□□ 0.2
VPS13BQ7Z7G8 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VPS13BQ7Z7G8 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
VPS13BQ7Z7G8 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC16.3■□□□□ 0.2
VPS13BQ7Z7G8 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC16.3■□□□□ 0.2
VPS13BQ7Z7G8 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
VPS13BQ7Z7G8 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VPS13BQ7Z7G8 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS13BQ7Z7G8 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VPS13BQ7Z7G8 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC16.29■□□□□ 0.2
VPS13BQ7Z7G8 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VPS13BQ7Z7G8 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS13BQ7Z7G8 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC16.29■□□□□ 0.2
VPS13BQ7Z7G8 AL033527.3-201ENST00000566366 1196 ntBASIC16.29■□□□□ 0.2
VPS13BQ7Z7G8 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS13BQ7Z7G8 AL161658.1-201ENST00000623641 1967 ntBASIC16.29■□□□□ 0.2
VPS13BQ7Z7G8 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VPS13BQ7Z7G8 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VPS13BQ7Z7G8 CHST11-202ENST00000546689 756 ntTSL 2 BASIC16.27■□□□□ 0.2
VPS13BQ7Z7G8 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VPS13BQ7Z7G8 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC16.27■□□□□ 0.19
VPS13BQ7Z7G8 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC16.27■□□□□ 0.19
VPS13BQ7Z7G8 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
VPS13BQ7Z7G8 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS13BQ7Z7G8 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS13BQ7Z7G8 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC16.25■□□□□ 0.19
VPS13BQ7Z7G8 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
VPS13BQ7Z7G8 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VPS13BQ7Z7G8 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VPS13BQ7Z7G8 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VPS13BQ7Z7G8 AC120057.4-201ENST00000624722 1615 ntBASIC16.24■□□□□ 0.19
VPS13BQ7Z7G8 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VPS13BQ7Z7G8 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS13BQ7Z7G8 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
VPS13BQ7Z7G8 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS13BQ7Z7G8 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS13BQ7Z7G8 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC16.22■□□□□ 0.19
VPS13BQ7Z7G8 LINC00273-201ENST00000539813 1452 ntBASIC16.22■□□□□ 0.19
VPS13BQ7Z7G8 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS13BQ7Z7G8 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS13BQ7Z7G8 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC16.21■□□□□ 0.19
VPS13BQ7Z7G8 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
VPS13BQ7Z7G8 AC012354.3-201ENST00000623734 483 ntBASIC16.21■□□□□ 0.19
VPS13BQ7Z7G8 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
VPS13BQ7Z7G8 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC16.2■□□□□ 0.18
VPS13BQ7Z7G8 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
VPS13BQ7Z7G8 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS13BQ7Z7G8 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS13BQ7Z7G8 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS13BQ7Z7G8 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VPS13BQ7Z7G8 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS13BQ7Z7G8 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS13BQ7Z7G8 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS13BQ7Z7G8 GFER-205ENST00000569451 517 ntTSL 5 BASIC16.19■□□□□ 0.18
VPS13BQ7Z7G8 TSPY13P-201ENST00000338964 914 ntBASIC16.19■□□□□ 0.18
VPS13BQ7Z7G8 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VPS13BQ7Z7G8 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS13BQ7Z7G8 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS13BQ7Z7G8 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS13BQ7Z7G8 AC018358.1-201ENST00000631079 1402 ntBASIC16.18■□□□□ 0.18
VPS13BQ7Z7G8 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC16.17■□□□□ 0.18
VPS13BQ7Z7G8 AC008813.1-201ENST00000536597 885 ntBASIC16.17■□□□□ 0.18
VPS13BQ7Z7G8 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS13BQ7Z7G8 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS13BQ7Z7G8 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS13BQ7Z7G8 RARRES2P1-201ENST00000474487 481 ntBASIC16.16■□□□□ 0.18
VPS13BQ7Z7G8 AC022413.1-201ENST00000624602 984 ntBASIC16.16■□□□□ 0.18
VPS13BQ7Z7G8 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS13BQ7Z7G8 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VPS13BQ7Z7G8 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC16.16■□□□□ 0.18
VPS13BQ7Z7G8 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS13BQ7Z7G8 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
VPS13BQ7Z7G8 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms