Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CHRFAM7AQ494W8 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
CHRFAM7AQ494W8 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CHRFAM7AQ494W8 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
CHRFAM7AQ494W8 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
CHRFAM7AQ494W8 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC22.42■■□□□ 1.18
CHRFAM7AQ494W8 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
CHRFAM7AQ494W8 RPS2-202ENST00000526522 924 ntTSL 2 BASIC22.41■■□□□ 1.18
CHRFAM7AQ494W8 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CHRFAM7AQ494W8 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC22.4■■□□□ 1.18
CHRFAM7AQ494W8 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
CHRFAM7AQ494W8 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC22.38■■□□□ 1.17
CHRFAM7AQ494W8 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CHRFAM7AQ494W8 MIR639-201ENST00000384974 98 ntBASIC22.37■■□□□ 1.17
CHRFAM7AQ494W8 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC22.37■■□□□ 1.17
CHRFAM7AQ494W8 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CHRFAM7AQ494W8 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CHRFAM7AQ494W8 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CHRFAM7AQ494W8 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CHRFAM7AQ494W8 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CHRFAM7AQ494W8 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CHRFAM7AQ494W8 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CHRFAM7AQ494W8 AL135925.1-201ENST00000605920 1701 ntBASIC22.34■■□□□ 1.17
CHRFAM7AQ494W8 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CHRFAM7AQ494W8 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC22.34■■□□□ 1.17
CHRFAM7AQ494W8 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC22.34■■□□□ 1.17
CHRFAM7AQ494W8 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CHRFAM7AQ494W8 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC22.33■■□□□ 1.17
CHRFAM7AQ494W8 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.33■■□□□ 1.16
CHRFAM7AQ494W8 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
CHRFAM7AQ494W8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC22.32■■□□□ 1.16
CHRFAM7AQ494W8 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CHRFAM7AQ494W8 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CHRFAM7AQ494W8 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CHRFAM7AQ494W8 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC22.31■■□□□ 1.16
CHRFAM7AQ494W8 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
CHRFAM7AQ494W8 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CHRFAM7AQ494W8 CALM3-209ENST00000597743 577 ntTSL 4 BASIC22.31■■□□□ 1.16
CHRFAM7AQ494W8 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CHRFAM7AQ494W8 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHRFAM7AQ494W8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHRFAM7AQ494W8 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHRFAM7AQ494W8 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CHRFAM7AQ494W8 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CHRFAM7AQ494W8 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHRFAM7AQ494W8 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CHRFAM7AQ494W8 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CHRFAM7AQ494W8 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC22.29■■□□□ 1.16
CHRFAM7AQ494W8 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHRFAM7AQ494W8 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHRFAM7AQ494W8 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
CHRFAM7AQ494W8 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHRFAM7AQ494W8 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CHRFAM7AQ494W8 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC22.28■■□□□ 1.16
CHRFAM7AQ494W8 WASH5P-204ENST00000632292 975 ntBASIC22.28■■□□□ 1.16
CHRFAM7AQ494W8 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CHRFAM7AQ494W8 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHRFAM7AQ494W8 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC22.27■■□□□ 1.16
CHRFAM7AQ494W8 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
CHRFAM7AQ494W8 AC142086.6-201ENST00000621154 1765 ntBASIC22.26■■□□□ 1.15
CHRFAM7AQ494W8 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CHRFAM7AQ494W8 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CHRFAM7AQ494W8 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
CHRFAM7AQ494W8 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CHRFAM7AQ494W8 CIB2-204ENST00000557846 934 ntTSL 3 BASIC22.25■■□□□ 1.15
CHRFAM7AQ494W8 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC22.25■■□□□ 1.15
CHRFAM7AQ494W8 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
CHRFAM7AQ494W8 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
CHRFAM7AQ494W8 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CHRFAM7AQ494W8 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC22.24■■□□□ 1.15
CHRFAM7AQ494W8 AC021231.2-201ENST00000594613 730 ntBASIC22.24■■□□□ 1.15
CHRFAM7AQ494W8 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
CHRFAM7AQ494W8 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CHRFAM7AQ494W8 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CHRFAM7AQ494W8 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC22.23■■□□□ 1.15
CHRFAM7AQ494W8 HSD17B1P1-201ENST00000590052 955 ntBASIC22.23■■□□□ 1.15
CHRFAM7AQ494W8 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CHRFAM7AQ494W8 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CHRFAM7AQ494W8 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
CHRFAM7AQ494W8 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CHRFAM7AQ494W8 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CHRFAM7AQ494W8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CHRFAM7AQ494W8 RNF166-209ENST00000567844 633 ntTSL 5 BASIC22.22■■□□□ 1.15
CHRFAM7AQ494W8 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CHRFAM7AQ494W8 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC22.21■■□□□ 1.15
CHRFAM7AQ494W8 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CHRFAM7AQ494W8 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CHRFAM7AQ494W8 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CHRFAM7AQ494W8 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CHRFAM7AQ494W8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC22.21■■□□□ 1.15
CHRFAM7AQ494W8 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CHRFAM7AQ494W8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.2■■□□□ 1.14
CHRFAM7AQ494W8 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CHRFAM7AQ494W8 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CHRFAM7AQ494W8 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
CHRFAM7AQ494W8 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CHRFAM7AQ494W8 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC22.2■■□□□ 1.14
CHRFAM7AQ494W8 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CHRFAM7AQ494W8 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CHRFAM7AQ494W8 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms