Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.19■■■□□ 2.26
CHRFAM7AQ494W8 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC28.22■■■□□ 2.11
CHRFAM7AQ494W8 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
CHRFAM7AQ494W8 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CHRFAM7AQ494W8 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC28.01■■■□□ 2.07
CHRFAM7AQ494W8 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC27.93■■■□□ 2.06
CHRFAM7AQ494W8 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC27.86■■■□□ 2.05
CHRFAM7AQ494W8 HES6-203ENST00000409160 1600 ntTSL 2 BASIC27.59■■■□□ 2.01
CHRFAM7AQ494W8 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CHRFAM7AQ494W8 AL356512.1-201ENST00000607453 1739 ntBASIC27.42■■□□□ 1.98
CHRFAM7AQ494W8 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC27.27■■□□□ 1.96
CHRFAM7AQ494W8 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CHRFAM7AQ494W8 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
CHRFAM7AQ494W8 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CHRFAM7AQ494W8 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
CHRFAM7AQ494W8 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC27■■□□□ 1.91
CHRFAM7AQ494W8 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC26.98■■□□□ 1.91
CHRFAM7AQ494W8 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC26.97■■□□□ 1.91
CHRFAM7AQ494W8 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CHRFAM7AQ494W8 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
CHRFAM7AQ494W8 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CHRFAM7AQ494W8 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC26.83■■□□□ 1.89
CHRFAM7AQ494W8 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC26.71■■□□□ 1.87
CHRFAM7AQ494W8 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC26.63■■□□□ 1.85
CHRFAM7AQ494W8 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC26.59■■□□□ 1.85
CHRFAM7AQ494W8 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC26.57■■□□□ 1.84
CHRFAM7AQ494W8 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
CHRFAM7AQ494W8 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CHRFAM7AQ494W8 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
CHRFAM7AQ494W8 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CHRFAM7AQ494W8 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CHRFAM7AQ494W8 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC26.33■■□□□ 1.8
CHRFAM7AQ494W8 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
CHRFAM7AQ494W8 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
CHRFAM7AQ494W8 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CHRFAM7AQ494W8 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CHRFAM7AQ494W8 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CHRFAM7AQ494W8 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
CHRFAM7AQ494W8 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
CHRFAM7AQ494W8 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CHRFAM7AQ494W8 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CHRFAM7AQ494W8 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC26.15■■□□□ 1.78
CHRFAM7AQ494W8 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CHRFAM7AQ494W8 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
CHRFAM7AQ494W8 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CHRFAM7AQ494W8 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CHRFAM7AQ494W8 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
CHRFAM7AQ494W8 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
CHRFAM7AQ494W8 INO80B-203ENST00000409917 796 ntTSL 2 BASIC25.86■■□□□ 1.73
CHRFAM7AQ494W8 ZNRF2P1-201ENST00000441407 443 ntBASIC25.83■■□□□ 1.73
CHRFAM7AQ494W8 AC006077.2-201ENST00000623591 457 ntBASIC25.8■■□□□ 1.72
CHRFAM7AQ494W8 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC25.72■■□□□ 1.71
CHRFAM7AQ494W8 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
CHRFAM7AQ494W8 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC25.71■■□□□ 1.71
CHRFAM7AQ494W8 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC25.65■■□□□ 1.7
CHRFAM7AQ494W8 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
CHRFAM7AQ494W8 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC25.62■■□□□ 1.69
CHRFAM7AQ494W8 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CHRFAM7AQ494W8 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
CHRFAM7AQ494W8 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CHRFAM7AQ494W8 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
CHRFAM7AQ494W8 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC25.53■■□□□ 1.68
CHRFAM7AQ494W8 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CHRFAM7AQ494W8 AC015813.7-201ENST00000623294 581 ntBASIC25.43■■□□□ 1.66
CHRFAM7AQ494W8 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CHRFAM7AQ494W8 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CHRFAM7AQ494W8 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CHRFAM7AQ494W8 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CHRFAM7AQ494W8 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CHRFAM7AQ494W8 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CHRFAM7AQ494W8 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
CHRFAM7AQ494W8 AP002365.1-201ENST00000603448 772 ntBASIC25.17■■□□□ 1.62
CHRFAM7AQ494W8 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CHRFAM7AQ494W8 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC25.12■■□□□ 1.61
CHRFAM7AQ494W8 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CHRFAM7AQ494W8 ILK-212ENST00000532063 1617 ntTSL 2 BASIC25.1■■□□□ 1.61
CHRFAM7AQ494W8 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
CHRFAM7AQ494W8 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
CHRFAM7AQ494W8 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
CHRFAM7AQ494W8 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CHRFAM7AQ494W8 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CHRFAM7AQ494W8 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
CHRFAM7AQ494W8 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC25.01■■□□□ 1.59
CHRFAM7AQ494W8 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CHRFAM7AQ494W8 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC25■■□□□ 1.59
CHRFAM7AQ494W8 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CHRFAM7AQ494W8 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
CHRFAM7AQ494W8 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC24.92■■□□□ 1.58
CHRFAM7AQ494W8 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC24.91■■□□□ 1.58
CHRFAM7AQ494W8 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CHRFAM7AQ494W8 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CHRFAM7AQ494W8 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC24.89■■□□□ 1.58
CHRFAM7AQ494W8 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
CHRFAM7AQ494W8 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC24.86■■□□□ 1.57
CHRFAM7AQ494W8 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC24.84■■□□□ 1.57
CHRFAM7AQ494W8 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CHRFAM7AQ494W8 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CHRFAM7AQ494W8 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC24.81■■□□□ 1.56
CHRFAM7AQ494W8 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC24.8■■□□□ 1.56
CHRFAM7AQ494W8 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 7.1 ms