Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PRAMEF11O60813 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PRAMEF11O60813 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.49■■□□□ 1.83
PRAMEF11O60813 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PRAMEF11O60813 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PRAMEF11O60813 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
PRAMEF11O60813 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
PRAMEF11O60813 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.48■■□□□ 1.83
PRAMEF11O60813 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
PRAMEF11O60813 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PRAMEF11O60813 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
PRAMEF11O60813 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PRAMEF11O60813 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PRAMEF11O60813 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.47■■□□□ 1.83
PRAMEF11O60813 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.47■■□□□ 1.83
PRAMEF11O60813 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.47■■□□□ 1.83
PRAMEF11O60813 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.47■■□□□ 1.83
PRAMEF11O60813 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
PRAMEF11O60813 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.47■■□□□ 1.83
PRAMEF11O60813 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
PRAMEF11O60813 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.46■■□□□ 1.83
PRAMEF11O60813 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
PRAMEF11O60813 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
PRAMEF11O60813 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PRAMEF11O60813 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
PRAMEF11O60813 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.45■■□□□ 1.82
PRAMEF11O60813 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.45■■□□□ 1.82
PRAMEF11O60813 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.45■■□□□ 1.82
PRAMEF11O60813 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.44■■□□□ 1.82
PRAMEF11O60813 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PRAMEF11O60813 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
PRAMEF11O60813 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
PRAMEF11O60813 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PRAMEF11O60813 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PRAMEF11O60813 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
PRAMEF11O60813 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
PRAMEF11O60813 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
PRAMEF11O60813 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
PRAMEF11O60813 AL139393.2-201ENST00000608721 2025 ntBASIC26.42■■□□□ 1.82
PRAMEF11O60813 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.41■■□□□ 1.82
PRAMEF11O60813 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PRAMEF11O60813 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
PRAMEF11O60813 LINC00273-201ENST00000539813 1452 ntBASIC26.41■■□□□ 1.82
PRAMEF11O60813 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PRAMEF11O60813 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.4■■□□□ 1.82
PRAMEF11O60813 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PRAMEF11O60813 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.4■■□□□ 1.82
PRAMEF11O60813 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.4■■□□□ 1.82
PRAMEF11O60813 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.4■■□□□ 1.82
PRAMEF11O60813 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
PRAMEF11O60813 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PRAMEF11O60813 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.39■■□□□ 1.82
PRAMEF11O60813 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.38■■□□□ 1.81
PRAMEF11O60813 ABCB10P3-201ENST00000561950 2166 ntBASIC26.38■■□□□ 1.81
PRAMEF11O60813 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
PRAMEF11O60813 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PRAMEF11O60813 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.36■■□□□ 1.81
PRAMEF11O60813 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
PRAMEF11O60813 ABHD17AP4-201ENST00000411545 909 ntBASIC26.36■■□□□ 1.81
PRAMEF11O60813 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
PRAMEF11O60813 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
PRAMEF11O60813 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.35■■□□□ 1.81
PRAMEF11O60813 AP004833.2-201ENST00000532228 1454 ntBASIC26.35■■□□□ 1.81
PRAMEF11O60813 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.34■■□□□ 1.81
PRAMEF11O60813 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
PRAMEF11O60813 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
PRAMEF11O60813 AC135983.2-203ENST00000454486 1613 ntBASIC26.33■■□□□ 1.81
PRAMEF11O60813 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
PRAMEF11O60813 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.33■■□□□ 1.81
PRAMEF11O60813 ZNRF2P2-203ENST00000454624 420 ntBASIC26.32■■□□□ 1.8
PRAMEF11O60813 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.32■■□□□ 1.8
PRAMEF11O60813 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
PRAMEF11O60813 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.32■■□□□ 1.8
PRAMEF11O60813 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
PRAMEF11O60813 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
PRAMEF11O60813 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.29■■□□□ 1.8
PRAMEF11O60813 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
PRAMEF11O60813 AC139426.1-201ENST00000568218 2529 ntBASIC26.29■■□□□ 1.8
PRAMEF11O60813 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.29■■□□□ 1.8
PRAMEF11O60813 WHAMMP2-203ENST00000563942 1603 ntBASIC26.28■■□□□ 1.8
PRAMEF11O60813 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.28■■□□□ 1.8
PRAMEF11O60813 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.28■■□□□ 1.8
PRAMEF11O60813 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.28■■□□□ 1.8
PRAMEF11O60813 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.28■■□□□ 1.8
PRAMEF11O60813 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PRAMEF11O60813 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
PRAMEF11O60813 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PRAMEF11O60813 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.26■■□□□ 1.79
PRAMEF11O60813 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.25■■□□□ 1.79
PRAMEF11O60813 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.25■■□□□ 1.79
PRAMEF11O60813 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PRAMEF11O60813 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
PRAMEF11O60813 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PRAMEF11O60813 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
PRAMEF11O60813 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.24■■□□□ 1.79
PRAMEF11O60813 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PRAMEF11O60813 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PRAMEF11O60813 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PRAMEF11O60813 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PRAMEF11O60813 LINC01971-201ENST00000617888 1048 ntBASIC26.23■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms