Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PRAMEF11O60813 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PRAMEF11O60813 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.49■■□□□ 1.83
PRAMEF11O60813 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PRAMEF11O60813 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PRAMEF11O60813 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
PRAMEF11O60813 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
PRAMEF11O60813 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.48■■□□□ 1.83
PRAMEF11O60813 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
PRAMEF11O60813 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PRAMEF11O60813 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
PRAMEF11O60813 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PRAMEF11O60813 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PRAMEF11O60813 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.47■■□□□ 1.83
PRAMEF11O60813 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.47■■□□□ 1.83
PRAMEF11O60813 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.47■■□□□ 1.83
PRAMEF11O60813 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.47■■□□□ 1.83
PRAMEF11O60813 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
PRAMEF11O60813 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.47■■□□□ 1.83
PRAMEF11O60813 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
PRAMEF11O60813 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.46■■□□□ 1.83
PRAMEF11O60813 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
PRAMEF11O60813 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
PRAMEF11O60813 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PRAMEF11O60813 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
PRAMEF11O60813 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.45■■□□□ 1.82
PRAMEF11O60813 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.45■■□□□ 1.82
PRAMEF11O60813 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.45■■□□□ 1.82
PRAMEF11O60813 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.44■■□□□ 1.82
PRAMEF11O60813 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PRAMEF11O60813 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
PRAMEF11O60813 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
PRAMEF11O60813 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PRAMEF11O60813 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PRAMEF11O60813 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
PRAMEF11O60813 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
PRAMEF11O60813 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
PRAMEF11O60813 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
PRAMEF11O60813 AL139393.2-201ENST00000608721 2025 ntBASIC26.42■■□□□ 1.82
PRAMEF11O60813 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.41■■□□□ 1.82
PRAMEF11O60813 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PRAMEF11O60813 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
PRAMEF11O60813 LINC00273-201ENST00000539813 1452 ntBASIC26.41■■□□□ 1.82
PRAMEF11O60813 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PRAMEF11O60813 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.4■■□□□ 1.82
PRAMEF11O60813 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PRAMEF11O60813 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.4■■□□□ 1.82
PRAMEF11O60813 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.4■■□□□ 1.82
PRAMEF11O60813 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.4■■□□□ 1.82
PRAMEF11O60813 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
PRAMEF11O60813 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PRAMEF11O60813 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.39■■□□□ 1.82
PRAMEF11O60813 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.38■■□□□ 1.81
PRAMEF11O60813 ABCB10P3-201ENST00000561950 2166 ntBASIC26.38■■□□□ 1.81
PRAMEF11O60813 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
PRAMEF11O60813 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PRAMEF11O60813 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.36■■□□□ 1.81
PRAMEF11O60813 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
PRAMEF11O60813 ABHD17AP4-201ENST00000411545 909 ntBASIC26.36■■□□□ 1.81
PRAMEF11O60813 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
PRAMEF11O60813 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
PRAMEF11O60813 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.35■■□□□ 1.81
PRAMEF11O60813 AP004833.2-201ENST00000532228 1454 ntBASIC26.35■■□□□ 1.81
PRAMEF11O60813 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.34■■□□□ 1.81
PRAMEF11O60813 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
PRAMEF11O60813 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
PRAMEF11O60813 AC135983.2-203ENST00000454486 1613 ntBASIC26.33■■□□□ 1.81
PRAMEF11O60813 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
PRAMEF11O60813 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.33■■□□□ 1.81
PRAMEF11O60813 ZNRF2P2-203ENST00000454624 420 ntBASIC26.32■■□□□ 1.8
PRAMEF11O60813 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.32■■□□□ 1.8
PRAMEF11O60813 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
PRAMEF11O60813 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.32■■□□□ 1.8
PRAMEF11O60813 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
PRAMEF11O60813 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
PRAMEF11O60813 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.29■■□□□ 1.8
PRAMEF11O60813 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
PRAMEF11O60813 AC139426.1-201ENST00000568218 2529 ntBASIC26.29■■□□□ 1.8
PRAMEF11O60813 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.29■■□□□ 1.8
PRAMEF11O60813 WHAMMP2-203ENST00000563942 1603 ntBASIC26.28■■□□□ 1.8
PRAMEF11O60813 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.28■■□□□ 1.8
PRAMEF11O60813 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.28■■□□□ 1.8
PRAMEF11O60813 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.28■■□□□ 1.8
PRAMEF11O60813 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.28■■□□□ 1.8
PRAMEF11O60813 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PRAMEF11O60813 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
PRAMEF11O60813 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PRAMEF11O60813 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.26■■□□□ 1.79
PRAMEF11O60813 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.25■■□□□ 1.79
PRAMEF11O60813 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.25■■□□□ 1.79
PRAMEF11O60813 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PRAMEF11O60813 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
PRAMEF11O60813 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PRAMEF11O60813 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
PRAMEF11O60813 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.24■■□□□ 1.79
PRAMEF11O60813 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PRAMEF11O60813 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PRAMEF11O60813 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PRAMEF11O60813 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PRAMEF11O60813 LINC01971-201ENST00000617888 1048 ntBASIC26.23■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms