Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC28.68■■■□□ 2.18
SPDYE4A6NLX3 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
SPDYE4A6NLX3 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC28.67■■■□□ 2.18
SPDYE4A6NLX3 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC28.67■■■□□ 2.18
SPDYE4A6NLX3 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SPDYE4A6NLX3 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SPDYE4A6NLX3 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC28.66■■■□□ 2.18
SPDYE4A6NLX3 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC28.66■■■□□ 2.18
SPDYE4A6NLX3 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC28.65■■■□□ 2.18
SPDYE4A6NLX3 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SPDYE4A6NLX3 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC28.65■■■□□ 2.18
SPDYE4A6NLX3 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
SPDYE4A6NLX3 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SPDYE4A6NLX3 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
SPDYE4A6NLX3 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
SPDYE4A6NLX3 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC28.64■■■□□ 2.18
SPDYE4A6NLX3 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
SPDYE4A6NLX3 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC28.64■■■□□ 2.18
SPDYE4A6NLX3 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC28.63■■■□□ 2.17
SPDYE4A6NLX3 CIB2-204ENST00000557846 934 ntTSL 3 BASIC28.62■■■□□ 2.17
SPDYE4A6NLX3 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
SPDYE4A6NLX3 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SPDYE4A6NLX3 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC28.61■■■□□ 2.17
SPDYE4A6NLX3 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC28.61■■■□□ 2.17
SPDYE4A6NLX3 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC28.61■■■□□ 2.17
SPDYE4A6NLX3 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
SPDYE4A6NLX3 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC28.6■■■□□ 2.17
SPDYE4A6NLX3 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
SPDYE4A6NLX3 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC28.59■■■□□ 2.17
SPDYE4A6NLX3 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
SPDYE4A6NLX3 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC28.58■■■□□ 2.17
SPDYE4A6NLX3 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC28.58■■■□□ 2.17
SPDYE4A6NLX3 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
SPDYE4A6NLX3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
SPDYE4A6NLX3 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC28.58■■■□□ 2.17
SPDYE4A6NLX3 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
SPDYE4A6NLX3 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
SPDYE4A6NLX3 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC28.56■■■□□ 2.16
SPDYE4A6NLX3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC28.56■■■□□ 2.16
SPDYE4A6NLX3 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
SPDYE4A6NLX3 SHF-207ENST00000560540 2062 ntTSL 5 BASIC28.54■■■□□ 2.16
SPDYE4A6NLX3 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC28.54■■■□□ 2.16
SPDYE4A6NLX3 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC28.54■■■□□ 2.16
SPDYE4A6NLX3 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC28.53■■■□□ 2.16
SPDYE4A6NLX3 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
SPDYE4A6NLX3 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
SPDYE4A6NLX3 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC28.53■■■□□ 2.16
SPDYE4A6NLX3 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
SPDYE4A6NLX3 AC021231.2-201ENST00000594613 730 ntBASIC28.52■■■□□ 2.16
SPDYE4A6NLX3 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
SPDYE4A6NLX3 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
SPDYE4A6NLX3 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
SPDYE4A6NLX3 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
SPDYE4A6NLX3 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
SPDYE4A6NLX3 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC28.5■■■□□ 2.15
SPDYE4A6NLX3 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC28.49■■■□□ 2.15
SPDYE4A6NLX3 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
SPDYE4A6NLX3 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
SPDYE4A6NLX3 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC28.47■■■□□ 2.15
SPDYE4A6NLX3 AC108673.1-201ENST00000510422 1159 ntBASIC28.47■■■□□ 2.15
SPDYE4A6NLX3 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC28.47■■■□□ 2.15
SPDYE4A6NLX3 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC28.47■■■□□ 2.15
SPDYE4A6NLX3 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC28.47■■■□□ 2.15
SPDYE4A6NLX3 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC28.47■■■□□ 2.15
SPDYE4A6NLX3 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC28.46■■■□□ 2.15
SPDYE4A6NLX3 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC28.46■■■□□ 2.15
SPDYE4A6NLX3 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
SPDYE4A6NLX3 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
SPDYE4A6NLX3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC28.45■■■□□ 2.14
SPDYE4A6NLX3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC28.45■■■□□ 2.14
SPDYE4A6NLX3 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
SPDYE4A6NLX3 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC28.45■■■□□ 2.14
SPDYE4A6NLX3 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
SPDYE4A6NLX3 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
SPDYE4A6NLX3 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
SPDYE4A6NLX3 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
SPDYE4A6NLX3 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
SPDYE4A6NLX3 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC28.43■■■□□ 2.14
SPDYE4A6NLX3 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
SPDYE4A6NLX3 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
SPDYE4A6NLX3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
SPDYE4A6NLX3 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
SPDYE4A6NLX3 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC28.41■■■□□ 2.14
SPDYE4A6NLX3 AC142086.6-201ENST00000621154 1765 ntBASIC28.4■■■□□ 2.14
SPDYE4A6NLX3 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
SPDYE4A6NLX3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC28.4■■■□□ 2.14
SPDYE4A6NLX3 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC28.4■■■□□ 2.14
SPDYE4A6NLX3 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
SPDYE4A6NLX3 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
SPDYE4A6NLX3 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
SPDYE4A6NLX3 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
SPDYE4A6NLX3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC28.39■■■□□ 2.14
SPDYE4A6NLX3 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC28.39■■■□□ 2.13
SPDYE4A6NLX3 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
SPDYE4A6NLX3 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
SPDYE4A6NLX3 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC28.37■■■□□ 2.13
SPDYE4A6NLX3 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
SPDYE4A6NLX3 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SPDYE4A6NLX3 MIR6090-201ENST00000622481 60 ntBASIC28.37■■■□□ 2.13
SPDYE4A6NLX3 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC28.36■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms