Protein–RNA interactions for Protein: A6NI15

MSGN1, Mesogenin-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSGN1A6NI15 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
MSGN1A6NI15 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
MSGN1A6NI15 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC21.38■■□□□ 1.01
MSGN1A6NI15 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MSGN1A6NI15 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MSGN1A6NI15 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MSGN1A6NI15 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.38■■□□□ 1.01
MSGN1A6NI15 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MSGN1A6NI15 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.38■■□□□ 1.01
MSGN1A6NI15 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MSGN1A6NI15 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MSGN1A6NI15 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MSGN1A6NI15 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
MSGN1A6NI15 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
MSGN1A6NI15 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MSGN1A6NI15 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
MSGN1A6NI15 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MSGN1A6NI15 SETD8P1-201ENST00000623146 1180 ntBASIC21.35■■□□□ 1.01
MSGN1A6NI15 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MSGN1A6NI15 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MSGN1A6NI15 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MSGN1A6NI15 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MSGN1A6NI15 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
MSGN1A6NI15 WASH5P-204ENST00000632292 975 ntBASIC21.33■■□□□ 1.01
MSGN1A6NI15 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.33■■□□□ 1
MSGN1A6NI15 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
MSGN1A6NI15 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MSGN1A6NI15 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
MSGN1A6NI15 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
MSGN1A6NI15 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC21.31■■□□□ 1
MSGN1A6NI15 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.31■■□□□ 1
MSGN1A6NI15 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MSGN1A6NI15 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
MSGN1A6NI15 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.29■■□□□ 1
MSGN1A6NI15 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.28■■□□□ 1
MSGN1A6NI15 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
MSGN1A6NI15 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MSGN1A6NI15 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC21.28■■□□□ 1
MSGN1A6NI15 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.27■■□□□ 1
MSGN1A6NI15 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC21.27■■□□□ 1
MSGN1A6NI15 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.27■■□□□ 1
MSGN1A6NI15 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.27■■□□□ 1
MSGN1A6NI15 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.27■■□□□ 1
MSGN1A6NI15 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MSGN1A6NI15 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
MSGN1A6NI15 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MSGN1A6NI15 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MSGN1A6NI15 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21.26■□□□□ 0.99
MSGN1A6NI15 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
MSGN1A6NI15 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
MSGN1A6NI15 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MSGN1A6NI15 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MSGN1A6NI15 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MSGN1A6NI15 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.24■□□□□ 0.99
MSGN1A6NI15 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MSGN1A6NI15 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
MSGN1A6NI15 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MSGN1A6NI15 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MSGN1A6NI15 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
MSGN1A6NI15 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MSGN1A6NI15 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
MSGN1A6NI15 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
MSGN1A6NI15 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
MSGN1A6NI15 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.22■□□□□ 0.99
MSGN1A6NI15 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.21■□□□□ 0.99
MSGN1A6NI15 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
MSGN1A6NI15 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MSGN1A6NI15 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC21.2■□□□□ 0.98
MSGN1A6NI15 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MSGN1A6NI15 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
MSGN1A6NI15 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.19■□□□□ 0.98
MSGN1A6NI15 AL449106.1-201ENST00000608517 1980 ntBASIC21.19■□□□□ 0.98
MSGN1A6NI15 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MSGN1A6NI15 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MSGN1A6NI15 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MSGN1A6NI15 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
MSGN1A6NI15 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.18■□□□□ 0.98
MSGN1A6NI15 AC097358.2-201ENST00000607541 1159 ntBASIC21.18■□□□□ 0.98
MSGN1A6NI15 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
MSGN1A6NI15 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
MSGN1A6NI15 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MSGN1A6NI15 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
MSGN1A6NI15 BX255925.1-201ENST00000566954 1854 ntBASIC21.16■□□□□ 0.98
MSGN1A6NI15 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
MSGN1A6NI15 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC21.16■□□□□ 0.98
MSGN1A6NI15 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.16■□□□□ 0.98
MSGN1A6NI15 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MSGN1A6NI15 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
MSGN1A6NI15 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MSGN1A6NI15 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
MSGN1A6NI15 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.15■□□□□ 0.98
MSGN1A6NI15 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.14■□□□□ 0.98
MSGN1A6NI15 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
MSGN1A6NI15 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
MSGN1A6NI15 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MSGN1A6NI15 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.14■□□□□ 0.97
MSGN1A6NI15 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
MSGN1A6NI15 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MSGN1A6NI15 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.13■□□□□ 0.97
MSGN1A6NI15 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms