Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 AC127502.1-201ENST00000399971 1502 ntBASIC18.74■□□□□ 0.59
SMIM9A6NGZ8 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SMIM9A6NGZ8 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMIM9A6NGZ8 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC18.73■□□□□ 0.59
SMIM9A6NGZ8 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC18.73■□□□□ 0.59
SMIM9A6NGZ8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMIM9A6NGZ8 ABHD17AP4-201ENST00000411545 909 ntBASIC18.73■□□□□ 0.59
SMIM9A6NGZ8 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SMIM9A6NGZ8 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SMIM9A6NGZ8 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMIM9A6NGZ8 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMIM9A6NGZ8 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SMIM9A6NGZ8 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMIM9A6NGZ8 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC18.72■□□□□ 0.59
SMIM9A6NGZ8 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SMIM9A6NGZ8 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SMIM9A6NGZ8 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMIM9A6NGZ8 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMIM9A6NGZ8 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMIM9A6NGZ8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SMIM9A6NGZ8 LINC00273-201ENST00000539813 1452 ntBASIC18.71■□□□□ 0.59
SMIM9A6NGZ8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM9A6NGZ8 CALM3-209ENST00000597743 577 ntTSL 4 BASIC18.7■□□□□ 0.58
SMIM9A6NGZ8 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM9A6NGZ8 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMIM9A6NGZ8 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC18.69■□□□□ 0.58
SMIM9A6NGZ8 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SMIM9A6NGZ8 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC18.69■□□□□ 0.58
SMIM9A6NGZ8 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC18.69■□□□□ 0.58
SMIM9A6NGZ8 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMIM9A6NGZ8 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SMIM9A6NGZ8 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SMIM9A6NGZ8 ZNRF2P2-203ENST00000454624 420 ntBASIC18.68■□□□□ 0.58
SMIM9A6NGZ8 AP004833.2-201ENST00000532228 1454 ntBASIC18.68■□□□□ 0.58
SMIM9A6NGZ8 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM9A6NGZ8 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM9A6NGZ8 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM9A6NGZ8 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC18.67■□□□□ 0.58
SMIM9A6NGZ8 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC18.67■□□□□ 0.58
SMIM9A6NGZ8 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
SMIM9A6NGZ8 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC18.66■□□□□ 0.58
SMIM9A6NGZ8 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM9A6NGZ8 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SMIM9A6NGZ8 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMIM9A6NGZ8 LINC01971-201ENST00000617888 1048 ntBASIC18.65■□□□□ 0.58
SMIM9A6NGZ8 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMIM9A6NGZ8 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMIM9A6NGZ8 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMIM9A6NGZ8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC18.64■□□□□ 0.57
SMIM9A6NGZ8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC18.64■□□□□ 0.57
SMIM9A6NGZ8 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SMIM9A6NGZ8 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMIM9A6NGZ8 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMIM9A6NGZ8 ABCB10P1-201ENST00000614297 2181 ntBASIC18.62■□□□□ 0.57
SMIM9A6NGZ8 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC18.62■□□□□ 0.57
SMIM9A6NGZ8 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMIM9A6NGZ8 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMIM9A6NGZ8 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMIM9A6NGZ8 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SMIM9A6NGZ8 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMIM9A6NGZ8 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC18.61■□□□□ 0.57
SMIM9A6NGZ8 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMIM9A6NGZ8 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SMIM9A6NGZ8 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMIM9A6NGZ8 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM9A6NGZ8 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM9A6NGZ8 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM9A6NGZ8 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM9A6NGZ8 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM9A6NGZ8 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
SMIM9A6NGZ8 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM9A6NGZ8 AC135983.2-203ENST00000454486 1613 ntBASIC18.6■□□□□ 0.57
SMIM9A6NGZ8 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
SMIM9A6NGZ8 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMIM9A6NGZ8 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMIM9A6NGZ8 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMIM9A6NGZ8 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC18.59■□□□□ 0.57
SMIM9A6NGZ8 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
SMIM9A6NGZ8 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMIM9A6NGZ8 AGPS-202ENST00000409888 815 ntTSL 4 BASIC18.58■□□□□ 0.56
SMIM9A6NGZ8 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC18.58■□□□□ 0.56
SMIM9A6NGZ8 MIR7108-201ENST00000614319 87 ntBASIC18.58■□□□□ 0.56
SMIM9A6NGZ8 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMIM9A6NGZ8 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMIM9A6NGZ8 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SMIM9A6NGZ8 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMIM9A6NGZ8 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC18.57■□□□□ 0.56
SMIM9A6NGZ8 MEST-211ENST00000437945 1455 ntTSL 5 BASIC18.57■□□□□ 0.56
SMIM9A6NGZ8 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
SMIM9A6NGZ8 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SMIM9A6NGZ8 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMIM9A6NGZ8 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC18.55■□□□□ 0.56
SMIM9A6NGZ8 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMIM9A6NGZ8 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC18.55■□□□□ 0.56
SMIM9A6NGZ8 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC18.55■□□□□ 0.56
SMIM9A6NGZ8 DUX4L11-201ENST00000611504 1267 ntBASIC18.55■□□□□ 0.56
SMIM9A6NGZ8 DUX4L12-201ENST00000614593 1267 ntBASIC18.55■□□□□ 0.56
SMIM9A6NGZ8 DUX4L14-201ENST00000621227 1267 ntBASIC18.55■□□□□ 0.56
SMIM9A6NGZ8 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMIM9A6NGZ8 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms