Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PCDHB11Q9Y5F2 HGH1-207ENST00000628266 258 ntTSL 5 BASIC25.74■■□□□ 1.71
PCDHB11Q9Y5F2 DUX4L29-201ENST00000425409 679 ntBASIC25.73■■□□□ 1.71
PCDHB11Q9Y5F2 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDHB11Q9Y5F2 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHB11Q9Y5F2 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHB11Q9Y5F2 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.72■■□□□ 1.71
PCDHB11Q9Y5F2 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.72■■□□□ 1.71
PCDHB11Q9Y5F2 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC25.71■■□□□ 1.71
PCDHB11Q9Y5F2 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC25.71■■□□□ 1.71
PCDHB11Q9Y5F2 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC25.71■■□□□ 1.71
PCDHB11Q9Y5F2 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHB11Q9Y5F2 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHB11Q9Y5F2 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
PCDHB11Q9Y5F2 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHB11Q9Y5F2 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHB11Q9Y5F2 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHB11Q9Y5F2 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC25.69■■□□□ 1.7
PCDHB11Q9Y5F2 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
PCDHB11Q9Y5F2 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHB11Q9Y5F2 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHB11Q9Y5F2 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC25.68■■□□□ 1.7
PCDHB11Q9Y5F2 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHB11Q9Y5F2 ABCB10P1-201ENST00000614297 2181 ntBASIC25.68■■□□□ 1.7
PCDHB11Q9Y5F2 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHB11Q9Y5F2 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC25.67■■□□□ 1.7
PCDHB11Q9Y5F2 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHB11Q9Y5F2 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC25.67■■□□□ 1.7
PCDHB11Q9Y5F2 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHB11Q9Y5F2 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHB11Q9Y5F2 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC25.66■■□□□ 1.7
PCDHB11Q9Y5F2 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHB11Q9Y5F2 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC25.66■■□□□ 1.7
PCDHB11Q9Y5F2 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHB11Q9Y5F2 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHB11Q9Y5F2 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
PCDHB11Q9Y5F2 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.64■■□□□ 1.7
PCDHB11Q9Y5F2 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC25.64■■□□□ 1.7
PCDHB11Q9Y5F2 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
PCDHB11Q9Y5F2 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHB11Q9Y5F2 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC25.63■■□□□ 1.69
PCDHB11Q9Y5F2 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
PCDHB11Q9Y5F2 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC25.63■■□□□ 1.69
PCDHB11Q9Y5F2 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
PCDHB11Q9Y5F2 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHB11Q9Y5F2 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHB11Q9Y5F2 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
PCDHB11Q9Y5F2 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHB11Q9Y5F2 CIB2-204ENST00000557846 934 ntTSL 3 BASIC25.6■■□□□ 1.69
PCDHB11Q9Y5F2 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHB11Q9Y5F2 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHB11Q9Y5F2 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC25.59■■□□□ 1.69
PCDHB11Q9Y5F2 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHB11Q9Y5F2 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
PCDHB11Q9Y5F2 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHB11Q9Y5F2 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHB11Q9Y5F2 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHB11Q9Y5F2 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
PCDHB11Q9Y5F2 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHB11Q9Y5F2 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC25.56■■□□□ 1.68
PCDHB11Q9Y5F2 AC108673.1-201ENST00000510422 1159 ntBASIC25.55■■□□□ 1.68
PCDHB11Q9Y5F2 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
PCDHB11Q9Y5F2 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHB11Q9Y5F2 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHB11Q9Y5F2 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHB11Q9Y5F2 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC25.53■■□□□ 1.68
PCDHB11Q9Y5F2 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHB11Q9Y5F2 AC021231.2-201ENST00000594613 730 ntBASIC25.53■■□□□ 1.68
PCDHB11Q9Y5F2 AL135925.1-201ENST00000605920 1701 ntBASIC25.52■■□□□ 1.68
PCDHB11Q9Y5F2 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHB11Q9Y5F2 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHB11Q9Y5F2 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHB11Q9Y5F2 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHB11Q9Y5F2 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.49■■□□□ 1.67
PCDHB11Q9Y5F2 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHB11Q9Y5F2 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHB11Q9Y5F2 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
PCDHB11Q9Y5F2 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC25.48■■□□□ 1.67
PCDHB11Q9Y5F2 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
PCDHB11Q9Y5F2 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHB11Q9Y5F2 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC25.47■■□□□ 1.67
PCDHB11Q9Y5F2 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.47■■□□□ 1.67
PCDHB11Q9Y5F2 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHB11Q9Y5F2 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.46■■□□□ 1.67
PCDHB11Q9Y5F2 MIR4449-201ENST00000578365 66 ntBASIC25.46■■□□□ 1.67
PCDHB11Q9Y5F2 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
PCDHB11Q9Y5F2 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHB11Q9Y5F2 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHB11Q9Y5F2 MIR639-201ENST00000384974 98 ntBASIC25.45■■□□□ 1.66
PCDHB11Q9Y5F2 AC010864.1-201ENST00000609407 1511 ntBASIC25.45■■□□□ 1.66
PCDHB11Q9Y5F2 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHB11Q9Y5F2 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHB11Q9Y5F2 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHB11Q9Y5F2 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC25.44■■□□□ 1.66
PCDHB11Q9Y5F2 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.44■■□□□ 1.66
PCDHB11Q9Y5F2 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC25.44■■□□□ 1.66
PCDHB11Q9Y5F2 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHB11Q9Y5F2 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC25.44■■□□□ 1.66
PCDHB11Q9Y5F2 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC25.44■■□□□ 1.66
PCDHB11Q9Y5F2 ABCB10P3-201ENST00000561950 2166 ntBASIC25.44■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms