Protein–RNA interactions for Protein: Q9Y4D8

HECTD4, Probable E3 ubiquitin-protein ligase HECTD4, humanhuman

Predictions only

Length 3,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HECTD4Q9Y4D8 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC17.72■□□□□ 0.43
HECTD4Q9Y4D8 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HECTD4Q9Y4D8 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
HECTD4Q9Y4D8 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC17.7■□□□□ 0.42
HECTD4Q9Y4D8 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC17.7■□□□□ 0.42
HECTD4Q9Y4D8 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC17.7■□□□□ 0.42
HECTD4Q9Y4D8 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC17.7■□□□□ 0.42
HECTD4Q9Y4D8 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HECTD4Q9Y4D8 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC17.69■□□□□ 0.42
HECTD4Q9Y4D8 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HECTD4Q9Y4D8 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HECTD4Q9Y4D8 GPX1-201ENST00000419349 1106 ntBASIC17.68■□□□□ 0.42
HECTD4Q9Y4D8 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
HECTD4Q9Y4D8 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
HECTD4Q9Y4D8 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
HECTD4Q9Y4D8 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HECTD4Q9Y4D8 NTF6A-201ENST00000591175 560 ntBASIC17.67■□□□□ 0.42
HECTD4Q9Y4D8 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HECTD4Q9Y4D8 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HECTD4Q9Y4D8 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HECTD4Q9Y4D8 AC108673.1-201ENST00000510422 1159 ntBASIC17.67■□□□□ 0.42
HECTD4Q9Y4D8 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HECTD4Q9Y4D8 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HECTD4Q9Y4D8 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC17.65■□□□□ 0.42
HECTD4Q9Y4D8 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HECTD4Q9Y4D8 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
HECTD4Q9Y4D8 HES6-205ENST00000409356 528 ntTSL 2 BASIC17.65■□□□□ 0.42
HECTD4Q9Y4D8 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HECTD4Q9Y4D8 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HECTD4Q9Y4D8 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HECTD4Q9Y4D8 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HECTD4Q9Y4D8 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HECTD4Q9Y4D8 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC17.64■□□□□ 0.41
HECTD4Q9Y4D8 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HECTD4Q9Y4D8 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC17.63■□□□□ 0.41
HECTD4Q9Y4D8 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HECTD4Q9Y4D8 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC17.62■□□□□ 0.41
HECTD4Q9Y4D8 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HECTD4Q9Y4D8 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC17.61■□□□□ 0.41
HECTD4Q9Y4D8 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HECTD4Q9Y4D8 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HECTD4Q9Y4D8 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HECTD4Q9Y4D8 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
HECTD4Q9Y4D8 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HECTD4Q9Y4D8 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC17.59■□□□□ 0.41
HECTD4Q9Y4D8 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC17.58■□□□□ 0.41
HECTD4Q9Y4D8 AL592295.1-201ENST00000400984 884 ntBASIC17.58■□□□□ 0.41
HECTD4Q9Y4D8 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HECTD4Q9Y4D8 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HECTD4Q9Y4D8 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HECTD4Q9Y4D8 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC17.57■□□□□ 0.4
HECTD4Q9Y4D8 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HECTD4Q9Y4D8 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC17.57■□□□□ 0.4
HECTD4Q9Y4D8 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HECTD4Q9Y4D8 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
HECTD4Q9Y4D8 AC019069.1-201ENST00000610008 1333 ntBASIC17.56■□□□□ 0.4
HECTD4Q9Y4D8 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HECTD4Q9Y4D8 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HECTD4Q9Y4D8 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HECTD4Q9Y4D8 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC17.56■□□□□ 0.4
HECTD4Q9Y4D8 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC17.55■□□□□ 0.4
HECTD4Q9Y4D8 AC012354.3-201ENST00000623734 483 ntBASIC17.55■□□□□ 0.4
HECTD4Q9Y4D8 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
HECTD4Q9Y4D8 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HECTD4Q9Y4D8 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HECTD4Q9Y4D8 AL033527.3-201ENST00000566366 1196 ntBASIC17.55■□□□□ 0.4
HECTD4Q9Y4D8 AC018358.1-201ENST00000631079 1402 ntBASIC17.54■□□□□ 0.4
HECTD4Q9Y4D8 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HECTD4Q9Y4D8 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC17.54■□□□□ 0.4
HECTD4Q9Y4D8 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC17.54■□□□□ 0.4
HECTD4Q9Y4D8 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC17.53■□□□□ 0.4
HECTD4Q9Y4D8 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
HECTD4Q9Y4D8 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
HECTD4Q9Y4D8 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC17.52■□□□□ 0.4
HECTD4Q9Y4D8 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HECTD4Q9Y4D8 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
HECTD4Q9Y4D8 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HECTD4Q9Y4D8 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC17.51■□□□□ 0.39
HECTD4Q9Y4D8 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
HECTD4Q9Y4D8 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC17.51■□□□□ 0.39
HECTD4Q9Y4D8 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HECTD4Q9Y4D8 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HECTD4Q9Y4D8 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HECTD4Q9Y4D8 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HECTD4Q9Y4D8 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HECTD4Q9Y4D8 TPT1-202ENST00000379055 948 ntTSL 2 BASIC17.49■□□□□ 0.39
HECTD4Q9Y4D8 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HECTD4Q9Y4D8 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
HECTD4Q9Y4D8 CHML-204ENST00000638121 920 ntTSL 2 BASIC17.49■□□□□ 0.39
HECTD4Q9Y4D8 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HECTD4Q9Y4D8 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HECTD4Q9Y4D8 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HECTD4Q9Y4D8 CEP120-209ENST00000515110 606 ntTSL 3 BASIC17.47■□□□□ 0.39
HECTD4Q9Y4D8 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HECTD4Q9Y4D8 AC008813.1-201ENST00000536597 885 ntBASIC17.47■□□□□ 0.39
HECTD4Q9Y4D8 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
HECTD4Q9Y4D8 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
HECTD4Q9Y4D8 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HECTD4Q9Y4D8 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.46■□□□□ 0.39
HECTD4Q9Y4D8 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms