Protein–RNA interactions for Protein: Q8NHU3

SGMS2, Phosphatidylcholine:ceramide cholinephosphotransferase 2, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS2Q8NHU3 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SGMS2Q8NHU3 ABCB10P1-201ENST00000614297 2181 ntBASIC21.42■■□□□ 1.02
SGMS2Q8NHU3 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.42■■□□□ 1.02
SGMS2Q8NHU3 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
SGMS2Q8NHU3 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SGMS2Q8NHU3 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SGMS2Q8NHU3 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.41■■□□□ 1.02
SGMS2Q8NHU3 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SGMS2Q8NHU3 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SGMS2Q8NHU3 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SGMS2Q8NHU3 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SGMS2Q8NHU3 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SGMS2Q8NHU3 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.38■■□□□ 1.01
SGMS2Q8NHU3 WASH5P-204ENST00000632292 975 ntBASIC21.38■■□□□ 1.01
SGMS2Q8NHU3 ABCB10P3-201ENST00000561950 2166 ntBASIC21.38■■□□□ 1.01
SGMS2Q8NHU3 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SGMS2Q8NHU3 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SGMS2Q8NHU3 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC21.37■■□□□ 1.01
SGMS2Q8NHU3 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
SGMS2Q8NHU3 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SGMS2Q8NHU3 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SGMS2Q8NHU3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.36■■□□□ 1.01
SGMS2Q8NHU3 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.36■■□□□ 1.01
SGMS2Q8NHU3 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.35■■□□□ 1.01
SGMS2Q8NHU3 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SGMS2Q8NHU3 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.35■■□□□ 1.01
SGMS2Q8NHU3 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SGMS2Q8NHU3 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
SGMS2Q8NHU3 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.35■■□□□ 1.01
SGMS2Q8NHU3 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
SGMS2Q8NHU3 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SGMS2Q8NHU3 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SGMS2Q8NHU3 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SGMS2Q8NHU3 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.33■■□□□ 1.01
SGMS2Q8NHU3 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SGMS2Q8NHU3 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SGMS2Q8NHU3 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.32■■□□□ 1
SGMS2Q8NHU3 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC21.32■■□□□ 1
SGMS2Q8NHU3 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SGMS2Q8NHU3 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.31■■□□□ 1
SGMS2Q8NHU3 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
SGMS2Q8NHU3 MIR3648-2-201ENST00000581792 180 ntBASIC21.3■■□□□ 1
SGMS2Q8NHU3 MIR3648-1-201ENST00000615959 180 ntBASIC21.3■■□□□ 1
SGMS2Q8NHU3 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
SGMS2Q8NHU3 AC139426.1-201ENST00000568218 2529 ntBASIC21.3■■□□□ 1
SGMS2Q8NHU3 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC21.3■■□□□ 1
SGMS2Q8NHU3 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.29■■□□□ 1
SGMS2Q8NHU3 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
SGMS2Q8NHU3 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC21.28■■□□□ 1
SGMS2Q8NHU3 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
SGMS2Q8NHU3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SGMS2Q8NHU3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.28■■□□□ 1
SGMS2Q8NHU3 AC016575.1-201ENST00000607026 382 ntBASIC21.28■■□□□ 1
SGMS2Q8NHU3 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.28■■□□□ 1
SGMS2Q8NHU3 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.28■■□□□ 1
SGMS2Q8NHU3 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.28■■□□□ 1
SGMS2Q8NHU3 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SGMS2Q8NHU3 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.27■■□□□ 1
SGMS2Q8NHU3 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.27■■□□□ 1
SGMS2Q8NHU3 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SGMS2Q8NHU3 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
SGMS2Q8NHU3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.26■□□□□ 0.99
SGMS2Q8NHU3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.26■□□□□ 0.99
SGMS2Q8NHU3 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC21.26■□□□□ 0.99
SGMS2Q8NHU3 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SGMS2Q8NHU3 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SGMS2Q8NHU3 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
SGMS2Q8NHU3 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.25■□□□□ 0.99
SGMS2Q8NHU3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.25■□□□□ 0.99
SGMS2Q8NHU3 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SGMS2Q8NHU3 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
SGMS2Q8NHU3 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SGMS2Q8NHU3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.23■□□□□ 0.99
SGMS2Q8NHU3 AC021231.2-201ENST00000594613 730 ntBASIC21.23■□□□□ 0.99
SGMS2Q8NHU3 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.23■□□□□ 0.99
SGMS2Q8NHU3 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SGMS2Q8NHU3 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SGMS2Q8NHU3 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SGMS2Q8NHU3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
SGMS2Q8NHU3 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SGMS2Q8NHU3 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SGMS2Q8NHU3 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.2■□□□□ 0.98
SGMS2Q8NHU3 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.2■□□□□ 0.98
SGMS2Q8NHU3 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.19■□□□□ 0.98
SGMS2Q8NHU3 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
SGMS2Q8NHU3 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SGMS2Q8NHU3 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SGMS2Q8NHU3 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SGMS2Q8NHU3 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SGMS2Q8NHU3 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SGMS2Q8NHU3 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SGMS2Q8NHU3 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC21.17■□□□□ 0.98
SGMS2Q8NHU3 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.16■□□□□ 0.98
SGMS2Q8NHU3 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.16■□□□□ 0.98
SGMS2Q8NHU3 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SGMS2Q8NHU3 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.15■□□□□ 0.98
SGMS2Q8NHU3 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SGMS2Q8NHU3 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SGMS2Q8NHU3 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SGMS2Q8NHU3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms