Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
KRT40Q6A162 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
KRT40Q6A162 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC30.52■■■□□ 2.48
KRT40Q6A162 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
KRT40Q6A162 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
KRT40Q6A162 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
KRT40Q6A162 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
KRT40Q6A162 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC30.49■■■□□ 2.47
KRT40Q6A162 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC30.49■■■□□ 2.47
KRT40Q6A162 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
KRT40Q6A162 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
KRT40Q6A162 ABHD17AP4-201ENST00000411545 909 ntBASIC30.48■■■□□ 2.47
KRT40Q6A162 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC30.48■■■□□ 2.47
KRT40Q6A162 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC30.47■■■□□ 2.47
KRT40Q6A162 PVT1-219ENST00000523427 938 ntTSL 3 BASIC30.47■■■□□ 2.47
KRT40Q6A162 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC30.47■■■□□ 2.47
KRT40Q6A162 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC30.46■■■□□ 2.47
KRT40Q6A162 AC139426.1-201ENST00000568218 2529 ntBASIC30.44■■■□□ 2.46
KRT40Q6A162 AC010864.1-201ENST00000609407 1511 ntBASIC30.44■■■□□ 2.46
KRT40Q6A162 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
KRT40Q6A162 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC30.43■■■□□ 2.46
KRT40Q6A162 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC30.42■■■□□ 2.46
KRT40Q6A162 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
KRT40Q6A162 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
KRT40Q6A162 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC30.41■■■□□ 2.46
KRT40Q6A162 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC30.41■■■□□ 2.46
KRT40Q6A162 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
KRT40Q6A162 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC30.39■■■□□ 2.46
KRT40Q6A162 MIR762-201ENST00000390236 83 ntBASIC30.39■■■□□ 2.46
KRT40Q6A162 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC30.39■■■□□ 2.45
KRT40Q6A162 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
KRT40Q6A162 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.38■■■□□ 2.45
KRT40Q6A162 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
KRT40Q6A162 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC30.37■■■□□ 2.45
KRT40Q6A162 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.37■■■□□ 2.45
KRT40Q6A162 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
KRT40Q6A162 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC30.36■■■□□ 2.45
KRT40Q6A162 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
KRT40Q6A162 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
KRT40Q6A162 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
KRT40Q6A162 HNRNPLP2-201ENST00000568980 1570 ntBASIC30.36■■■□□ 2.45
KRT40Q6A162 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
KRT40Q6A162 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
KRT40Q6A162 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC30.34■■■□□ 2.45
KRT40Q6A162 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
KRT40Q6A162 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC30.34■■■□□ 2.45
KRT40Q6A162 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
KRT40Q6A162 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
KRT40Q6A162 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC30.32■■■□□ 2.44
KRT40Q6A162 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
KRT40Q6A162 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
KRT40Q6A162 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
KRT40Q6A162 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC30.32■■■□□ 2.44
KRT40Q6A162 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.32■■■□□ 2.44
KRT40Q6A162 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC30.32■■■□□ 2.44
KRT40Q6A162 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
KRT40Q6A162 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.31■■■□□ 2.44
KRT40Q6A162 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC30.31■■■□□ 2.44
KRT40Q6A162 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
KRT40Q6A162 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
KRT40Q6A162 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
KRT40Q6A162 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
KRT40Q6A162 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC30.3■■■□□ 2.44
KRT40Q6A162 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.3■■■□□ 2.44
KRT40Q6A162 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.3■■■□□ 2.44
KRT40Q6A162 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
KRT40Q6A162 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC30.28■■■□□ 2.44
KRT40Q6A162 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
KRT40Q6A162 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.28■■■□□ 2.44
KRT40Q6A162 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.28■■■□□ 2.44
KRT40Q6A162 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
KRT40Q6A162 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
KRT40Q6A162 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
KRT40Q6A162 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC30.26■■■□□ 2.43
KRT40Q6A162 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC30.25■■■□□ 2.43
KRT40Q6A162 HLA-V-202ENST00000446817 847 ntBASIC30.25■■■□□ 2.43
KRT40Q6A162 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
KRT40Q6A162 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
KRT40Q6A162 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
KRT40Q6A162 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
KRT40Q6A162 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
KRT40Q6A162 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
KRT40Q6A162 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
KRT40Q6A162 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC30.24■■■□□ 2.43
KRT40Q6A162 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC30.24■■■□□ 2.43
KRT40Q6A162 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
KRT40Q6A162 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
KRT40Q6A162 MIR3665-201ENST00000578708 105 ntBASIC30.21■■■□□ 2.43
KRT40Q6A162 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
KRT40Q6A162 SHF-206ENST00000560471 2499 ntTSL 5 BASIC30.2■■■□□ 2.43
KRT40Q6A162 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC30.2■■■□□ 2.43
KRT40Q6A162 AC087741.3-201ENST00000624270 1347 ntBASIC30.2■■■□□ 2.42
KRT40Q6A162 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC30.19■■■□□ 2.42
KRT40Q6A162 MLEC-202ENST00000412616 841 ntTSL 3 BASIC30.19■■■□□ 2.42
KRT40Q6A162 AC005559.1-201ENST00000589661 871 ntBASIC30.19■■■□□ 2.42
KRT40Q6A162 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC30.19■■■□□ 2.42
KRT40Q6A162 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC30.19■■■□□ 2.42
KRT40Q6A162 AL139393.2-201ENST00000608721 2025 ntBASIC30.17■■■□□ 2.42
KRT40Q6A162 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC30.17■■■□□ 2.42
KRT40Q6A162 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms