Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
SH3D21A4FU49 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
SH3D21A4FU49 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
SH3D21A4FU49 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SH3D21A4FU49 HNRNPLP2-201ENST00000568980 1570 ntBASIC24.19■■□□□ 1.46
SH3D21A4FU49 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SH3D21A4FU49 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC24.18■■□□□ 1.46
SH3D21A4FU49 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC24.18■■□□□ 1.46
SH3D21A4FU49 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SH3D21A4FU49 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
SH3D21A4FU49 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SH3D21A4FU49 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SH3D21A4FU49 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SH3D21A4FU49 NRG1-221ENST00000614767 762 ntTSL 5 BASIC24.16■■□□□ 1.46
SH3D21A4FU49 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SH3D21A4FU49 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SH3D21A4FU49 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SH3D21A4FU49 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.15■■□□□ 1.46
SH3D21A4FU49 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SH3D21A4FU49 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SH3D21A4FU49 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SH3D21A4FU49 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
SH3D21A4FU49 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
SH3D21A4FU49 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SH3D21A4FU49 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SH3D21A4FU49 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
SH3D21A4FU49 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC24.13■■□□□ 1.45
SH3D21A4FU49 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SH3D21A4FU49 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
SH3D21A4FU49 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC24.13■■□□□ 1.45
SH3D21A4FU49 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SH3D21A4FU49 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC24.12■■□□□ 1.45
SH3D21A4FU49 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SH3D21A4FU49 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.11■■□□□ 1.45
SH3D21A4FU49 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
SH3D21A4FU49 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SH3D21A4FU49 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
SH3D21A4FU49 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
SH3D21A4FU49 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
SH3D21A4FU49 AL135925.1-201ENST00000605920 1701 ntBASIC24.1■■□□□ 1.45
SH3D21A4FU49 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SH3D21A4FU49 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SH3D21A4FU49 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.1■■□□□ 1.45
SH3D21A4FU49 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
SH3D21A4FU49 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SH3D21A4FU49 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
SH3D21A4FU49 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC24.08■■□□□ 1.45
SH3D21A4FU49 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
SH3D21A4FU49 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
SH3D21A4FU49 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
SH3D21A4FU49 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
SH3D21A4FU49 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SH3D21A4FU49 MIR3665-201ENST00000578708 105 ntBASIC24.07■■□□□ 1.44
SH3D21A4FU49 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
SH3D21A4FU49 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
SH3D21A4FU49 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SH3D21A4FU49 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC24.05■■□□□ 1.44
SH3D21A4FU49 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC24.05■■□□□ 1.44
SH3D21A4FU49 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SH3D21A4FU49 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SH3D21A4FU49 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC24.04■■□□□ 1.44
SH3D21A4FU49 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
SH3D21A4FU49 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.03■■□□□ 1.44
SH3D21A4FU49 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SH3D21A4FU49 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC24.02■■□□□ 1.44
SH3D21A4FU49 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
SH3D21A4FU49 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.01■■□□□ 1.43
SH3D21A4FU49 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SH3D21A4FU49 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SH3D21A4FU49 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC24■■□□□ 1.43
SH3D21A4FU49 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SH3D21A4FU49 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC23.99■■□□□ 1.43
SH3D21A4FU49 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SH3D21A4FU49 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
SH3D21A4FU49 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
SH3D21A4FU49 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC23.99■■□□□ 1.43
SH3D21A4FU49 CHML-205ENST00000638160 705 ntTSL 3 BASIC23.99■■□□□ 1.43
SH3D21A4FU49 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SH3D21A4FU49 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SH3D21A4FU49 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC23.98■■□□□ 1.43
SH3D21A4FU49 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC23.98■■□□□ 1.43
SH3D21A4FU49 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SH3D21A4FU49 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
SH3D21A4FU49 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SH3D21A4FU49 MIR762-201ENST00000390236 83 ntBASIC23.97■■□□□ 1.43
SH3D21A4FU49 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SH3D21A4FU49 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC23.97■■□□□ 1.43
SH3D21A4FU49 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SH3D21A4FU49 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SH3D21A4FU49 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
SH3D21A4FU49 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
SH3D21A4FU49 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
SH3D21A4FU49 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SH3D21A4FU49 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SH3D21A4FU49 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SH3D21A4FU49 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SH3D21A4FU49 DUX4L28-201ENST00000623687 678 ntBASIC23.94■■□□□ 1.42
SH3D21A4FU49 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SH3D21A4FU49 AC005559.1-201ENST00000589661 871 ntBASIC23.93■■□□□ 1.42
SH3D21A4FU49 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 657.1 ms