Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV9-2A0A087WT02 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV9-2A0A087WT02 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV9-2A0A087WT02 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV9-2A0A087WT02 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV9-2A0A087WT02 AC120057.4-201ENST00000624722 1615 ntBASIC19.34■□□□□ 0.69
TRAV9-2A0A087WT02 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
TRAV9-2A0A087WT02 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
TRAV9-2A0A087WT02 AL031258.1-201ENST00000623562 325 ntBASIC19.33■□□□□ 0.68
TRAV9-2A0A087WT02 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.33■□□□□ 0.68
TRAV9-2A0A087WT02 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV9-2A0A087WT02 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.32■□□□□ 0.68
TRAV9-2A0A087WT02 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV9-2A0A087WT02 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
TRAV9-2A0A087WT02 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV9-2A0A087WT02 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
TRAV9-2A0A087WT02 EBPL-203ENST00000378270 579 ntTSL 2 BASIC19.31■□□□□ 0.68
TRAV9-2A0A087WT02 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV9-2A0A087WT02 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19.31■□□□□ 0.68
TRAV9-2A0A087WT02 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV9-2A0A087WT02 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV9-2A0A087WT02 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.29■□□□□ 0.68
TRAV9-2A0A087WT02 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV9-2A0A087WT02 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TRAV9-2A0A087WT02 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV9-2A0A087WT02 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV9-2A0A087WT02 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TRAV9-2A0A087WT02 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV9-2A0A087WT02 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV9-2A0A087WT02 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV9-2A0A087WT02 MVK-208ENST00000539696 608 ntTSL 5 BASIC19.27■□□□□ 0.68
TRAV9-2A0A087WT02 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRAV9-2A0A087WT02 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRAV9-2A0A087WT02 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC19.25■□□□□ 0.67
TRAV9-2A0A087WT02 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV9-2A0A087WT02 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV9-2A0A087WT02 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV9-2A0A087WT02 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV9-2A0A087WT02 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV9-2A0A087WT02 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TRAV9-2A0A087WT02 ST7-AS1-201ENST00000456775 1889 ntBASIC19.23■□□□□ 0.67
TRAV9-2A0A087WT02 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC19.23■□□□□ 0.67
TRAV9-2A0A087WT02 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV9-2A0A087WT02 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TRAV9-2A0A087WT02 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TRAV9-2A0A087WT02 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.23■□□□□ 0.67
TRAV9-2A0A087WT02 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV9-2A0A087WT02 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV9-2A0A087WT02 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.22■□□□□ 0.67
TRAV9-2A0A087WT02 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TRAV9-2A0A087WT02 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC19.21■□□□□ 0.67
TRAV9-2A0A087WT02 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV9-2A0A087WT02 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV9-2A0A087WT02 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV9-2A0A087WT02 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV9-2A0A087WT02 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV9-2A0A087WT02 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV9-2A0A087WT02 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV9-2A0A087WT02 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC19.19■□□□□ 0.66
TRAV9-2A0A087WT02 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC19.19■□□□□ 0.66
TRAV9-2A0A087WT02 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC19.19■□□□□ 0.66
TRAV9-2A0A087WT02 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV9-2A0A087WT02 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV9-2A0A087WT02 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV9-2A0A087WT02 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC19.18■□□□□ 0.66
TRAV9-2A0A087WT02 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV9-2A0A087WT02 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TRAV9-2A0A087WT02 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV9-2A0A087WT02 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TRAV9-2A0A087WT02 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV9-2A0A087WT02 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
TRAV9-2A0A087WT02 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV9-2A0A087WT02 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV9-2A0A087WT02 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV9-2A0A087WT02 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV9-2A0A087WT02 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV9-2A0A087WT02 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV9-2A0A087WT02 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TRAV9-2A0A087WT02 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV9-2A0A087WT02 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV9-2A0A087WT02 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV9-2A0A087WT02 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV9-2A0A087WT02 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV9-2A0A087WT02 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV9-2A0A087WT02 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV9-2A0A087WT02 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TRAV9-2A0A087WT02 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
TRAV9-2A0A087WT02 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV9-2A0A087WT02 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV9-2A0A087WT02 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV9-2A0A087WT02 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
TRAV9-2A0A087WT02 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV9-2A0A087WT02 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.11■□□□□ 0.65
TRAV9-2A0A087WT02 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC19.11■□□□□ 0.65
TRAV9-2A0A087WT02 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV9-2A0A087WT02 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV9-2A0A087WT02 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV9-2A0A087WT02 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV9-2A0A087WT02 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC19.1■□□□□ 0.65
TRAV9-2A0A087WT02 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms