Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHCHD1Q96BP2 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CHCHD1Q96BP2 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHCHD1Q96BP2 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHCHD1Q96BP2 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CHCHD1Q96BP2 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHCHD1Q96BP2 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHCHD1Q96BP2 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CHCHD1Q96BP2 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHCHD1Q96BP2 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CHCHD1Q96BP2 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHCHD1Q96BP2 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHCHD1Q96BP2 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CHCHD1Q96BP2 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHCHD1Q96BP2 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CHCHD1Q96BP2 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CHCHD1Q96BP2 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC19.57■□□□□ 0.72
CHCHD1Q96BP2 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHCHD1Q96BP2 AL121749.1-202ENST00000609313 2153 ntBASIC19.56■□□□□ 0.72
CHCHD1Q96BP2 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHCHD1Q96BP2 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHCHD1Q96BP2 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHCHD1Q96BP2 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CHCHD1Q96BP2 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHCHD1Q96BP2 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHCHD1Q96BP2 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHCHD1Q96BP2 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHCHD1Q96BP2 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHCHD1Q96BP2 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHCHD1Q96BP2 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CHCHD1Q96BP2 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CHCHD1Q96BP2 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CHCHD1Q96BP2 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CHCHD1Q96BP2 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC19.51■□□□□ 0.71
CHCHD1Q96BP2 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHCHD1Q96BP2 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CHCHD1Q96BP2 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHCHD1Q96BP2 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHCHD1Q96BP2 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.49■□□□□ 0.71
CHCHD1Q96BP2 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHCHD1Q96BP2 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC19.48■□□□□ 0.71
CHCHD1Q96BP2 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHCHD1Q96BP2 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CHCHD1Q96BP2 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHCHD1Q96BP2 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CHCHD1Q96BP2 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHCHD1Q96BP2 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHCHD1Q96BP2 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHCHD1Q96BP2 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHCHD1Q96BP2 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHCHD1Q96BP2 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHCHD1Q96BP2 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHCHD1Q96BP2 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHCHD1Q96BP2 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC19.43■□□□□ 0.7
CHCHD1Q96BP2 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
CHCHD1Q96BP2 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHCHD1Q96BP2 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHCHD1Q96BP2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHCHD1Q96BP2 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHCHD1Q96BP2 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CHCHD1Q96BP2 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
CHCHD1Q96BP2 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHCHD1Q96BP2 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
CHCHD1Q96BP2 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHCHD1Q96BP2 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CHCHD1Q96BP2 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CHCHD1Q96BP2 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHCHD1Q96BP2 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHCHD1Q96BP2 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHCHD1Q96BP2 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC19.38■□□□□ 0.69
CHCHD1Q96BP2 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19.38■□□□□ 0.69
CHCHD1Q96BP2 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CHCHD1Q96BP2 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHCHD1Q96BP2 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHCHD1Q96BP2 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHCHD1Q96BP2 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHCHD1Q96BP2 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC19.37■□□□□ 0.69
CHCHD1Q96BP2 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHCHD1Q96BP2 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CHCHD1Q96BP2 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHCHD1Q96BP2 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHCHD1Q96BP2 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHCHD1Q96BP2 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC19.33■□□□□ 0.69
CHCHD1Q96BP2 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC19.33■□□□□ 0.69
CHCHD1Q96BP2 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHCHD1Q96BP2 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHCHD1Q96BP2 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHCHD1Q96BP2 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CHCHD1Q96BP2 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CHCHD1Q96BP2 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHCHD1Q96BP2 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CHCHD1Q96BP2 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHCHD1Q96BP2 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.29■□□□□ 0.68
CHCHD1Q96BP2 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.29■□□□□ 0.68
CHCHD1Q96BP2 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CHCHD1Q96BP2 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.29■□□□□ 0.68
CHCHD1Q96BP2 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
CHCHD1Q96BP2 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHCHD1Q96BP2 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHCHD1Q96BP2 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms