Protein–RNA interactions for Protein: Q8NDX2

SLC17A8, Vesicular glutamate transporter 3, humanhuman

Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC17A8Q8NDX2 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
SLC17A8Q8NDX2 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
SLC17A8Q8NDX2 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC30.07■■■□□ 2.4
SLC17A8Q8NDX2 AC005559.1-201ENST00000589661 871 ntBASIC30.07■■■□□ 2.4
SLC17A8Q8NDX2 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SLC17A8Q8NDX2 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
SLC17A8Q8NDX2 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
SLC17A8Q8NDX2 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SLC17A8Q8NDX2 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
SLC17A8Q8NDX2 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SLC17A8Q8NDX2 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC30.03■■■□□ 2.4
SLC17A8Q8NDX2 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.02■■■□□ 2.4
SLC17A8Q8NDX2 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
SLC17A8Q8NDX2 MACF1-219ENST00000484793 834 ntTSL 2 BASIC30.01■■■□□ 2.39
SLC17A8Q8NDX2 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
SLC17A8Q8NDX2 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC30■■■□□ 2.39
SLC17A8Q8NDX2 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC30■■■□□ 2.39
SLC17A8Q8NDX2 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
SLC17A8Q8NDX2 MIR762-201ENST00000390236 83 ntBASIC29.99■■■□□ 2.39
SLC17A8Q8NDX2 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC29.97■■■□□ 2.39
SLC17A8Q8NDX2 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC29.97■■■□□ 2.39
SLC17A8Q8NDX2 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
SLC17A8Q8NDX2 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
SLC17A8Q8NDX2 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC29.96■■■□□ 2.39
SLC17A8Q8NDX2 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC29.95■■■□□ 2.39
SLC17A8Q8NDX2 WASH5P-204ENST00000632292 975 ntBASIC29.95■■■□□ 2.39
SLC17A8Q8NDX2 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC29.94■■■□□ 2.38
SLC17A8Q8NDX2 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
SLC17A8Q8NDX2 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
SLC17A8Q8NDX2 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
SLC17A8Q8NDX2 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC29.91■■■□□ 2.38
SLC17A8Q8NDX2 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
SLC17A8Q8NDX2 AC016575.1-201ENST00000607026 382 ntBASIC29.89■■■□□ 2.38
SLC17A8Q8NDX2 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC29.89■■■□□ 2.38
SLC17A8Q8NDX2 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
SLC17A8Q8NDX2 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC29.88■■■□□ 2.37
SLC17A8Q8NDX2 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
SLC17A8Q8NDX2 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
SLC17A8Q8NDX2 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC29.87■■■□□ 2.37
SLC17A8Q8NDX2 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
SLC17A8Q8NDX2 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
SLC17A8Q8NDX2 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
SLC17A8Q8NDX2 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
SLC17A8Q8NDX2 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
SLC17A8Q8NDX2 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
SLC17A8Q8NDX2 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC29.83■■■□□ 2.37
SLC17A8Q8NDX2 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
SLC17A8Q8NDX2 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
SLC17A8Q8NDX2 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
SLC17A8Q8NDX2 DUX4L29-201ENST00000425409 679 ntBASIC29.81■■■□□ 2.36
SLC17A8Q8NDX2 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC29.81■■■□□ 2.36
SLC17A8Q8NDX2 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC29.81■■■□□ 2.36
SLC17A8Q8NDX2 MIR3648-2-201ENST00000581792 180 ntBASIC29.81■■■□□ 2.36
SLC17A8Q8NDX2 MIR3648-1-201ENST00000615959 180 ntBASIC29.81■■■□□ 2.36
SLC17A8Q8NDX2 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
SLC17A8Q8NDX2 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
SLC17A8Q8NDX2 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
SLC17A8Q8NDX2 GDI1-215ENST00000630693 786 ntTSL 4 BASIC29.79■■■□□ 2.36
SLC17A8Q8NDX2 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
SLC17A8Q8NDX2 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
SLC17A8Q8NDX2 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC29.77■■■□□ 2.36
SLC17A8Q8NDX2 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
SLC17A8Q8NDX2 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC29.77■■■□□ 2.36
SLC17A8Q8NDX2 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
SLC17A8Q8NDX2 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC29.74■■■□□ 2.35
SLC17A8Q8NDX2 RNF166-209ENST00000567844 633 ntTSL 5 BASIC29.74■■■□□ 2.35
SLC17A8Q8NDX2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC29.73■■■□□ 2.35
SLC17A8Q8NDX2 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC29.72■■■□□ 2.35
SLC17A8Q8NDX2 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
SLC17A8Q8NDX2 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
SLC17A8Q8NDX2 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC29.71■■■□□ 2.35
SLC17A8Q8NDX2 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
SLC17A8Q8NDX2 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
SLC17A8Q8NDX2 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
SLC17A8Q8NDX2 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
SLC17A8Q8NDX2 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC29.68■■■□□ 2.34
SLC17A8Q8NDX2 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
SLC17A8Q8NDX2 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
SLC17A8Q8NDX2 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
SLC17A8Q8NDX2 AC019069.1-201ENST00000610008 1333 ntBASIC29.66■■■□□ 2.34
SLC17A8Q8NDX2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC29.65■■■□□ 2.34
SLC17A8Q8NDX2 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC29.64■■■□□ 2.34
SLC17A8Q8NDX2 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC29.64■■■□□ 2.34
SLC17A8Q8NDX2 ABHD17AP5-201ENST00000580133 923 ntBASIC29.63■■■□□ 2.33
SLC17A8Q8NDX2 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC29.62■■■□□ 2.33
SLC17A8Q8NDX2 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC29.62■■■□□ 2.33
SLC17A8Q8NDX2 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC29.62■■■□□ 2.33
SLC17A8Q8NDX2 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
SLC17A8Q8NDX2 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC29.62■■■□□ 2.33
SLC17A8Q8NDX2 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC29.61■■■□□ 2.33
SLC17A8Q8NDX2 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC29.61■■■□□ 2.33
SLC17A8Q8NDX2 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC29.61■■■□□ 2.33
SLC17A8Q8NDX2 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC29.61■■■□□ 2.33
SLC17A8Q8NDX2 DENR-202ENST00000455982 1052 ntTSL 5 BASIC29.61■■■□□ 2.33
SLC17A8Q8NDX2 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
SLC17A8Q8NDX2 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
SLC17A8Q8NDX2 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC29.6■■■□□ 2.33
SLC17A8Q8NDX2 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC29.59■■■□□ 2.33
SLC17A8Q8NDX2 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC29.56■■■□□ 2.32
SLC17A8Q8NDX2 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC29.56■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms