Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 WASH5P-204ENST00000632292 975 ntBASIC30.31■■■□□ 2.44
RETREG2Q8NC44 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
RETREG2Q8NC44 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
RETREG2Q8NC44 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC30.29■■■□□ 2.44
RETREG2Q8NC44 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
RETREG2Q8NC44 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC30.28■■■□□ 2.44
RETREG2Q8NC44 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
RETREG2Q8NC44 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
RETREG2Q8NC44 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC30.27■■■□□ 2.44
RETREG2Q8NC44 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC30.26■■■□□ 2.43
RETREG2Q8NC44 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
RETREG2Q8NC44 ZNRF2P2-203ENST00000454624 420 ntBASIC30.25■■■□□ 2.43
RETREG2Q8NC44 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC30.24■■■□□ 2.43
RETREG2Q8NC44 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.23■■■□□ 2.43
RETREG2Q8NC44 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
RETREG2Q8NC44 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC30.21■■■□□ 2.43
RETREG2Q8NC44 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC30.21■■■□□ 2.43
RETREG2Q8NC44 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
RETREG2Q8NC44 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC30.2■■■□□ 2.43
RETREG2Q8NC44 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
RETREG2Q8NC44 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC30.19■■■□□ 2.42
RETREG2Q8NC44 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
RETREG2Q8NC44 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
RETREG2Q8NC44 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
RETREG2Q8NC44 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
RETREG2Q8NC44 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
RETREG2Q8NC44 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
RETREG2Q8NC44 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
RETREG2Q8NC44 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.17■■■□□ 2.42
RETREG2Q8NC44 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
RETREG2Q8NC44 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
RETREG2Q8NC44 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
RETREG2Q8NC44 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
RETREG2Q8NC44 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC30.14■■■□□ 2.41
RETREG2Q8NC44 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
RETREG2Q8NC44 HGH1-207ENST00000628266 258 ntTSL 5 BASIC30.12■■■□□ 2.41
RETREG2Q8NC44 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC30.12■■■□□ 2.41
RETREG2Q8NC44 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
RETREG2Q8NC44 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
RETREG2Q8NC44 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
RETREG2Q8NC44 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.11■■■□□ 2.41
RETREG2Q8NC44 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC30.11■■■□□ 2.41
RETREG2Q8NC44 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
RETREG2Q8NC44 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
RETREG2Q8NC44 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC30.1■■■□□ 2.41
RETREG2Q8NC44 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
RETREG2Q8NC44 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.09■■■□□ 2.41
RETREG2Q8NC44 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
RETREG2Q8NC44 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
RETREG2Q8NC44 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
RETREG2Q8NC44 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
RETREG2Q8NC44 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.07■■■□□ 2.4
RETREG2Q8NC44 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
RETREG2Q8NC44 AC120057.4-201ENST00000624722 1615 ntBASIC30.06■■■□□ 2.4
RETREG2Q8NC44 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
RETREG2Q8NC44 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
RETREG2Q8NC44 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC30.05■■■□□ 2.4
RETREG2Q8NC44 DUX4L29-201ENST00000425409 679 ntBASIC30.05■■■□□ 2.4
RETREG2Q8NC44 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.05■■■□□ 2.4
RETREG2Q8NC44 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.03■■■□□ 2.4
RETREG2Q8NC44 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
RETREG2Q8NC44 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC30.03■■■□□ 2.4
RETREG2Q8NC44 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
RETREG2Q8NC44 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
RETREG2Q8NC44 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC30.02■■■□□ 2.4
RETREG2Q8NC44 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
RETREG2Q8NC44 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
RETREG2Q8NC44 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC30.01■■■□□ 2.39
RETREG2Q8NC44 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
RETREG2Q8NC44 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
RETREG2Q8NC44 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
RETREG2Q8NC44 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC29.96■■■□□ 2.39
RETREG2Q8NC44 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
RETREG2Q8NC44 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
RETREG2Q8NC44 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
RETREG2Q8NC44 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
RETREG2Q8NC44 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
RETREG2Q8NC44 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
RETREG2Q8NC44 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC29.93■■■□□ 2.38
RETREG2Q8NC44 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC29.92■■■□□ 2.38
RETREG2Q8NC44 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
RETREG2Q8NC44 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
RETREG2Q8NC44 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC29.91■■■□□ 2.38
RETREG2Q8NC44 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
RETREG2Q8NC44 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC29.89■■■□□ 2.38
RETREG2Q8NC44 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
RETREG2Q8NC44 CIB2-204ENST00000557846 934 ntTSL 3 BASIC29.89■■■□□ 2.38
RETREG2Q8NC44 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC29.88■■■□□ 2.37
RETREG2Q8NC44 AC021231.2-201ENST00000594613 730 ntBASIC29.87■■■□□ 2.37
RETREG2Q8NC44 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
RETREG2Q8NC44 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
RETREG2Q8NC44 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC29.84■■■□□ 2.37
RETREG2Q8NC44 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
RETREG2Q8NC44 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC29.83■■■□□ 2.37
RETREG2Q8NC44 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
RETREG2Q8NC44 RPS2-202ENST00000526522 924 ntTSL 2 BASIC29.82■■■□□ 2.36
RETREG2Q8NC44 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
RETREG2Q8NC44 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
RETREG2Q8NC44 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC29.81■■■□□ 2.36
RETREG2Q8NC44 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC29.81■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms