Protein–RNA interactions for Protein: Q8N2G8

GHDC, GH3 domain-containing protein, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GHDCQ8N2G8 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
GHDCQ8N2G8 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC24.67■■□□□ 1.54
GHDCQ8N2G8 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC24.66■■□□□ 1.54
GHDCQ8N2G8 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
GHDCQ8N2G8 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
GHDCQ8N2G8 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
GHDCQ8N2G8 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC24.63■■□□□ 1.53
GHDCQ8N2G8 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
GHDCQ8N2G8 AL161658.1-201ENST00000623641 1967 ntBASIC24.62■■□□□ 1.53
GHDCQ8N2G8 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC24.62■■□□□ 1.53
GHDCQ8N2G8 MLEC-202ENST00000412616 841 ntTSL 3 BASIC24.62■■□□□ 1.53
GHDCQ8N2G8 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
GHDCQ8N2G8 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC24.61■■□□□ 1.53
GHDCQ8N2G8 ABHD17AP4-201ENST00000411545 909 ntBASIC24.6■■□□□ 1.53
GHDCQ8N2G8 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
GHDCQ8N2G8 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
GHDCQ8N2G8 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
GHDCQ8N2G8 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
GHDCQ8N2G8 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
GHDCQ8N2G8 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
GHDCQ8N2G8 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
GHDCQ8N2G8 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
GHDCQ8N2G8 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
GHDCQ8N2G8 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
GHDCQ8N2G8 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
GHDCQ8N2G8 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC24.56■■□□□ 1.52
GHDCQ8N2G8 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
GHDCQ8N2G8 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
GHDCQ8N2G8 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
GHDCQ8N2G8 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
GHDCQ8N2G8 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
GHDCQ8N2G8 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
GHDCQ8N2G8 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
GHDCQ8N2G8 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
GHDCQ8N2G8 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
GHDCQ8N2G8 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC24.53■■□□□ 1.52
GHDCQ8N2G8 MIR7108-201ENST00000614319 87 ntBASIC24.53■■□□□ 1.52
GHDCQ8N2G8 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
GHDCQ8N2G8 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC24.52■■□□□ 1.52
GHDCQ8N2G8 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
GHDCQ8N2G8 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
GHDCQ8N2G8 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC24.51■■□□□ 1.51
GHDCQ8N2G8 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
GHDCQ8N2G8 BOD1-206ENST00000480951 814 ntTSL 2 BASIC24.5■■□□□ 1.51
GHDCQ8N2G8 RPS2-209ENST00000529806 993 ntTSL 3 BASIC24.5■■□□□ 1.51
GHDCQ8N2G8 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC24.48■■□□□ 1.51
GHDCQ8N2G8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
GHDCQ8N2G8 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
GHDCQ8N2G8 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
GHDCQ8N2G8 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
GHDCQ8N2G8 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.46■■□□□ 1.51
GHDCQ8N2G8 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
GHDCQ8N2G8 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
GHDCQ8N2G8 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
GHDCQ8N2G8 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
GHDCQ8N2G8 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
GHDCQ8N2G8 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.45■■□□□ 1.5
GHDCQ8N2G8 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
GHDCQ8N2G8 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC24.44■■□□□ 1.5
GHDCQ8N2G8 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
GHDCQ8N2G8 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
GHDCQ8N2G8 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
GHDCQ8N2G8 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.43■■□□□ 1.5
GHDCQ8N2G8 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.43■■□□□ 1.5
GHDCQ8N2G8 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.43■■□□□ 1.5
GHDCQ8N2G8 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
GHDCQ8N2G8 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
GHDCQ8N2G8 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
GHDCQ8N2G8 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
GHDCQ8N2G8 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
GHDCQ8N2G8 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
GHDCQ8N2G8 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.42■■□□□ 1.5
GHDCQ8N2G8 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
GHDCQ8N2G8 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
GHDCQ8N2G8 ABCB10P1-201ENST00000614297 2181 ntBASIC24.41■■□□□ 1.5
GHDCQ8N2G8 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
GHDCQ8N2G8 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
GHDCQ8N2G8 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
GHDCQ8N2G8 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
GHDCQ8N2G8 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
GHDCQ8N2G8 PVT1-219ENST00000523427 938 ntTSL 3 BASIC24.39■■□□□ 1.49
GHDCQ8N2G8 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC24.39■■□□□ 1.49
GHDCQ8N2G8 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
GHDCQ8N2G8 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC24.38■■□□□ 1.49
GHDCQ8N2G8 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
GHDCQ8N2G8 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC24.37■■□□□ 1.49
GHDCQ8N2G8 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
GHDCQ8N2G8 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
GHDCQ8N2G8 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
GHDCQ8N2G8 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
GHDCQ8N2G8 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
GHDCQ8N2G8 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
GHDCQ8N2G8 ZNRF2P2-203ENST00000454624 420 ntBASIC24.33■■□□□ 1.49
GHDCQ8N2G8 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
GHDCQ8N2G8 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
GHDCQ8N2G8 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
GHDCQ8N2G8 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.32■■□□□ 1.48
GHDCQ8N2G8 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
GHDCQ8N2G8 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
GHDCQ8N2G8 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC24.31■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms