Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PDX1P52945 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC25.99■■□□□ 1.75
PDX1P52945 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PDX1P52945 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PDX1P52945 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC25.96■■□□□ 1.75
PDX1P52945 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
PDX1P52945 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
PDX1P52945 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
PDX1P52945 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
PDX1P52945 DUX4L29-201ENST00000425409 679 ntBASIC25.94■■□□□ 1.74
PDX1P52945 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PDX1P52945 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
PDX1P52945 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
PDX1P52945 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
PDX1P52945 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PDX1P52945 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC25.9■■□□□ 1.74
PDX1P52945 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC25.9■■□□□ 1.74
PDX1P52945 AC021231.2-201ENST00000594613 730 ntBASIC25.9■■□□□ 1.74
PDX1P52945 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
PDX1P52945 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
PDX1P52945 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
PDX1P52945 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC25.89■■□□□ 1.74
PDX1P52945 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.73
PDX1P52945 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC25.88■■□□□ 1.73
PDX1P52945 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PDX1P52945 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PDX1P52945 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.87■■□□□ 1.73
PDX1P52945 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PDX1P52945 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PDX1P52945 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PDX1P52945 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC25.85■■□□□ 1.73
PDX1P52945 MIR6090-201ENST00000622481 60 ntBASIC25.84■■□□□ 1.73
PDX1P52945 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
PDX1P52945 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.72
PDX1P52945 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
PDX1P52945 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC25.81■■□□□ 1.72
PDX1P52945 CIB2-204ENST00000557846 934 ntTSL 3 BASIC25.81■■□□□ 1.72
PDX1P52945 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC25.81■■□□□ 1.72
PDX1P52945 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PDX1P52945 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
PDX1P52945 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PDX1P52945 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PDX1P52945 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
PDX1P52945 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PDX1P52945 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PDX1P52945 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
PDX1P52945 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
PDX1P52945 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PDX1P52945 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.78■■□□□ 1.72
PDX1P52945 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PDX1P52945 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PDX1P52945 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC25.77■■□□□ 1.72
PDX1P52945 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.77■■□□□ 1.72
PDX1P52945 AC108673.1-201ENST00000510422 1159 ntBASIC25.77■■□□□ 1.72
PDX1P52945 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PDX1P52945 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PDX1P52945 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PDX1P52945 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PDX1P52945 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PDX1P52945 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC25.75■■□□□ 1.71
PDX1P52945 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
PDX1P52945 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PDX1P52945 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC25.74■■□□□ 1.71
PDX1P52945 MIR4449-201ENST00000578365 66 ntBASIC25.74■■□□□ 1.71
PDX1P52945 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
PDX1P52945 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC25.73■■□□□ 1.71
PDX1P52945 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC25.73■■□□□ 1.71
PDX1P52945 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PDX1P52945 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
PDX1P52945 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
PDX1P52945 MIR639-201ENST00000384974 98 ntBASIC25.72■■□□□ 1.71
PDX1P52945 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.72■■□□□ 1.71
PDX1P52945 ST7-205ENST00000393446 2114 ntTSL 5 BASIC25.72■■□□□ 1.71
PDX1P52945 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PDX1P52945 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
PDX1P52945 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
PDX1P52945 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.7■■□□□ 1.7
PDX1P52945 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
PDX1P52945 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
PDX1P52945 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
PDX1P52945 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PDX1P52945 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.69■■□□□ 1.7
PDX1P52945 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC25.68■■□□□ 1.7
PDX1P52945 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC25.68■■□□□ 1.7
PDX1P52945 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC25.68■■□□□ 1.7
PDX1P52945 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PDX1P52945 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PDX1P52945 MIR3648-2-201ENST00000581792 180 ntBASIC25.66■■□□□ 1.7
PDX1P52945 MIR3648-1-201ENST00000615959 180 ntBASIC25.66■■□□□ 1.7
PDX1P52945 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PDX1P52945 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC25.65■■□□□ 1.7
PDX1P52945 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
PDX1P52945 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PDX1P52945 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
PDX1P52945 AC016575.1-201ENST00000607026 382 ntBASIC25.64■■□□□ 1.7
PDX1P52945 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.63■■□□□ 1.69
PDX1P52945 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PDX1P52945 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC25.63■■□□□ 1.69
PDX1P52945 ST7-202ENST00000323984 2142 ntTSL 5 BASIC25.62■■□□□ 1.69
PDX1P52945 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 9.7 ms