Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
CKS2P33552 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CKS2P33552 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CKS2P33552 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CKS2P33552 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CKS2P33552 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CKS2P33552 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CKS2P33552 AC142086.6-201ENST00000621154 1765 ntBASIC19.52■□□□□ 0.72
CKS2P33552 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CKS2P33552 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CKS2P33552 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CKS2P33552 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CKS2P33552 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
CKS2P33552 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CKS2P33552 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CKS2P33552 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CKS2P33552 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CKS2P33552 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.5■□□□□ 0.71
CKS2P33552 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CKS2P33552 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CKS2P33552 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CKS2P33552 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CKS2P33552 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CKS2P33552 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC19.49■□□□□ 0.71
CKS2P33552 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CKS2P33552 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.49■□□□□ 0.71
CKS2P33552 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC19.48■□□□□ 0.71
CKS2P33552 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CKS2P33552 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC19.47■□□□□ 0.71
CKS2P33552 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CKS2P33552 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CKS2P33552 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CKS2P33552 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CKS2P33552 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CKS2P33552 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CKS2P33552 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC19.46■□□□□ 0.71
CKS2P33552 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CKS2P33552 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CKS2P33552 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CKS2P33552 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CKS2P33552 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CKS2P33552 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CKS2P33552 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CKS2P33552 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CKS2P33552 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CKS2P33552 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CKS2P33552 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CKS2P33552 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CKS2P33552 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC19.42■□□□□ 0.7
CKS2P33552 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CKS2P33552 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CKS2P33552 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CKS2P33552 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CKS2P33552 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CKS2P33552 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CKS2P33552 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CKS2P33552 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CKS2P33552 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CKS2P33552 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CKS2P33552 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CKS2P33552 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CKS2P33552 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CKS2P33552 MVK-208ENST00000539696 608 ntTSL 5 BASIC19.36■□□□□ 0.69
CKS2P33552 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CKS2P33552 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CKS2P33552 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CKS2P33552 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CKS2P33552 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CKS2P33552 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC19.34■□□□□ 0.69
CKS2P33552 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CKS2P33552 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CKS2P33552 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CKS2P33552 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CKS2P33552 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CKS2P33552 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC19.32■□□□□ 0.68
CKS2P33552 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC19.32■□□□□ 0.68
CKS2P33552 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.32■□□□□ 0.68
CKS2P33552 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CKS2P33552 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CKS2P33552 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC19.31■□□□□ 0.68
CKS2P33552 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CKS2P33552 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CKS2P33552 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CKS2P33552 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CKS2P33552 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CKS2P33552 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CKS2P33552 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CKS2P33552 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC19.28■□□□□ 0.68
CKS2P33552 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CKS2P33552 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CKS2P33552 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CKS2P33552 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CKS2P33552 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CKS2P33552 AL135925.1-201ENST00000605920 1701 ntBASIC19.27■□□□□ 0.68
CKS2P33552 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CKS2P33552 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CKS2P33552 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CKS2P33552 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CKS2P33552 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.25■□□□□ 0.67
CKS2P33552 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms