Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMIM17P0DL12 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMIM17P0DL12 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
SMIM17P0DL12 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SMIM17P0DL12 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMIM17P0DL12 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMIM17P0DL12 AC006077.2-201ENST00000623591 457 ntBASIC19.6■□□□□ 0.73
SMIM17P0DL12 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMIM17P0DL12 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
SMIM17P0DL12 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SMIM17P0DL12 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SMIM17P0DL12 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SMIM17P0DL12 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SMIM17P0DL12 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SMIM17P0DL12 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMIM17P0DL12 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
SMIM17P0DL12 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
SMIM17P0DL12 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SMIM17P0DL12 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMIM17P0DL12 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMIM17P0DL12 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMIM17P0DL12 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMIM17P0DL12 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SMIM17P0DL12 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC19.55■□□□□ 0.72
SMIM17P0DL12 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC19.54■□□□□ 0.72
SMIM17P0DL12 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMIM17P0DL12 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
SMIM17P0DL12 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SMIM17P0DL12 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC19.54■□□□□ 0.72
SMIM17P0DL12 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMIM17P0DL12 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.53■□□□□ 0.72
SMIM17P0DL12 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMIM17P0DL12 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
SMIM17P0DL12 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.71
SMIM17P0DL12 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SMIM17P0DL12 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMIM17P0DL12 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMIM17P0DL12 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC19.5■□□□□ 0.71
SMIM17P0DL12 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMIM17P0DL12 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SMIM17P0DL12 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMIM17P0DL12 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMIM17P0DL12 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC19.48■□□□□ 0.71
SMIM17P0DL12 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC19.48■□□□□ 0.71
SMIM17P0DL12 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMIM17P0DL12 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMIM17P0DL12 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMIM17P0DL12 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SMIM17P0DL12 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMIM17P0DL12 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMIM17P0DL12 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMIM17P0DL12 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMIM17P0DL12 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC19.45■□□□□ 0.7
SMIM17P0DL12 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM17P0DL12 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM17P0DL12 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM17P0DL12 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SMIM17P0DL12 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM17P0DL12 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM17P0DL12 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMIM17P0DL12 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMIM17P0DL12 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC19.42■□□□□ 0.7
SMIM17P0DL12 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMIM17P0DL12 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC19.42■□□□□ 0.7
SMIM17P0DL12 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMIM17P0DL12 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMIM17P0DL12 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMIM17P0DL12 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMIM17P0DL12 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMIM17P0DL12 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.4■□□□□ 0.7
SMIM17P0DL12 ZNRF2P1-201ENST00000441407 443 ntBASIC19.39■□□□□ 0.69
SMIM17P0DL12 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMIM17P0DL12 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC19.38■□□□□ 0.69
SMIM17P0DL12 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMIM17P0DL12 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMIM17P0DL12 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMIM17P0DL12 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SMIM17P0DL12 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMIM17P0DL12 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMIM17P0DL12 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
SMIM17P0DL12 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMIM17P0DL12 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMIM17P0DL12 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMIM17P0DL12 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SMIM17P0DL12 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMIM17P0DL12 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMIM17P0DL12 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMIM17P0DL12 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SMIM17P0DL12 ST7-AS1-201ENST00000456775 1889 ntBASIC19.35■□□□□ 0.69
SMIM17P0DL12 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMIM17P0DL12 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SMIM17P0DL12 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMIM17P0DL12 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMIM17P0DL12 EBPL-203ENST00000378270 579 ntTSL 2 BASIC19.33■□□□□ 0.68
SMIM17P0DL12 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC19.33■□□□□ 0.68
SMIM17P0DL12 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SMIM17P0DL12 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.33■□□□□ 0.68
SMIM17P0DL12 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC19.32■□□□□ 0.68
SMIM17P0DL12 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SMIM17P0DL12 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms