Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
UBCP0CG48 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
UBCP0CG48 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.32
UBCP0CG48 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
UBCP0CG48 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
UBCP0CG48 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
UBCP0CG48 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC23.25■■□□□ 1.31
UBCP0CG48 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC23.25■■□□□ 1.31
UBCP0CG48 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
UBCP0CG48 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
UBCP0CG48 AC139426.1-201ENST00000568218 2529 ntBASIC23.24■■□□□ 1.31
UBCP0CG48 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
UBCP0CG48 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.23■■□□□ 1.31
UBCP0CG48 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
UBCP0CG48 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC23.23■■□□□ 1.31
UBCP0CG48 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC23.23■■□□□ 1.31
UBCP0CG48 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
UBCP0CG48 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
UBCP0CG48 AL135925.1-201ENST00000605920 1701 ntBASIC23.22■■□□□ 1.31
UBCP0CG48 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23.21■■□□□ 1.31
UBCP0CG48 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
UBCP0CG48 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
UBCP0CG48 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC23.2■■□□□ 1.3
UBCP0CG48 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
UBCP0CG48 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
UBCP0CG48 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
UBCP0CG48 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
UBCP0CG48 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
UBCP0CG48 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
UBCP0CG48 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
UBCP0CG48 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
UBCP0CG48 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
UBCP0CG48 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
UBCP0CG48 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC23.16■■□□□ 1.3
UBCP0CG48 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
UBCP0CG48 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
UBCP0CG48 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
UBCP0CG48 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
UBCP0CG48 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.29
UBCP0CG48 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC23.14■■□□□ 1.29
UBCP0CG48 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
UBCP0CG48 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.13■■□□□ 1.29
UBCP0CG48 WASH5P-204ENST00000632292 975 ntBASIC23.13■■□□□ 1.29
UBCP0CG48 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
UBCP0CG48 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
UBCP0CG48 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
UBCP0CG48 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.12■■□□□ 1.29
UBCP0CG48 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC23.12■■□□□ 1.29
UBCP0CG48 KLF16-203ENST00000592313 508 ntTSL 3 BASIC23.12■■□□□ 1.29
UBCP0CG48 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
UBCP0CG48 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC23.11■■□□□ 1.29
UBCP0CG48 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
UBCP0CG48 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
UBCP0CG48 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.1■■□□□ 1.29
UBCP0CG48 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
UBCP0CG48 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
UBCP0CG48 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
UBCP0CG48 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
UBCP0CG48 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
UBCP0CG48 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
UBCP0CG48 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
UBCP0CG48 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC23.07■■□□□ 1.28
UBCP0CG48 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
UBCP0CG48 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
UBCP0CG48 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
UBCP0CG48 AL133380.1-201ENST00000506013 324 ntBASIC23.05■■□□□ 1.28
UBCP0CG48 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC23.05■■□□□ 1.28
UBCP0CG48 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC23.04■■□□□ 1.28
UBCP0CG48 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
UBCP0CG48 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
UBCP0CG48 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
UBCP0CG48 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
UBCP0CG48 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC23.03■■□□□ 1.28
UBCP0CG48 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
UBCP0CG48 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC23.02■■□□□ 1.28
UBCP0CG48 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.02■■□□□ 1.28
UBCP0CG48 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
UBCP0CG48 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
UBCP0CG48 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC22.99■■□□□ 1.27
UBCP0CG48 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
UBCP0CG48 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
UBCP0CG48 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
UBCP0CG48 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
UBCP0CG48 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
UBCP0CG48 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
UBCP0CG48 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
UBCP0CG48 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
UBCP0CG48 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
UBCP0CG48 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
UBCP0CG48 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
UBCP0CG48 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
UBCP0CG48 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
UBCP0CG48 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
UBCP0CG48 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
UBCP0CG48 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
UBCP0CG48 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
UBCP0CG48 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC22.9■■□□□ 1.26
UBCP0CG48 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
UBCP0CG48 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
UBCP0CG48 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms