Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCRAP04437 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TCRAP04437 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC20.27■□□□□ 0.84
TCRAP04437 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
TCRAP04437 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TCRAP04437 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TCRAP04437 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TCRAP04437 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TCRAP04437 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TCRAP04437 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
TCRAP04437 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
TCRAP04437 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TCRAP04437 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TCRAP04437 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.23■□□□□ 0.83
TCRAP04437 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TCRAP04437 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TCRAP04437 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.23■□□□□ 0.83
TCRAP04437 AL135925.1-201ENST00000605920 1701 ntBASIC20.23■□□□□ 0.83
TCRAP04437 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
TCRAP04437 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
TCRAP04437 AC142086.6-201ENST00000621154 1765 ntBASIC20.21■□□□□ 0.83
TCRAP04437 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TCRAP04437 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TCRAP04437 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TCRAP04437 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TCRAP04437 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TCRAP04437 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
TCRAP04437 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TCRAP04437 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TCRAP04437 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TCRAP04437 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
TCRAP04437 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TCRAP04437 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TCRAP04437 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TCRAP04437 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
TCRAP04437 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC20.19■□□□□ 0.82
TCRAP04437 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TCRAP04437 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TCRAP04437 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TCRAP04437 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
TCRAP04437 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.18■□□□□ 0.82
TCRAP04437 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TCRAP04437 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TCRAP04437 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TCRAP04437 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TCRAP04437 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TCRAP04437 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TCRAP04437 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC20.16■□□□□ 0.82
TCRAP04437 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TCRAP04437 EBPL-203ENST00000378270 579 ntTSL 2 BASIC20.15■□□□□ 0.82
TCRAP04437 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.15■□□□□ 0.82
TCRAP04437 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.15■□□□□ 0.82
TCRAP04437 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TCRAP04437 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TCRAP04437 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TCRAP04437 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TCRAP04437 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TCRAP04437 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TCRAP04437 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
TCRAP04437 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TCRAP04437 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.12■□□□□ 0.81
TCRAP04437 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.11■□□□□ 0.81
TCRAP04437 ZNRF2P1-201ENST00000441407 443 ntBASIC20.11■□□□□ 0.81
TCRAP04437 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TCRAP04437 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TCRAP04437 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TCRAP04437 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TCRAP04437 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TCRAP04437 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TCRAP04437 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TCRAP04437 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TCRAP04437 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
TCRAP04437 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCRAP04437 DYNLL1-208ENST00000550178 581 ntBASIC20.07■□□□□ 0.8
TCRAP04437 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
TCRAP04437 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TCRAP04437 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TCRAP04437 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC20.05■□□□□ 0.8
TCRAP04437 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TCRAP04437 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
TCRAP04437 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TCRAP04437 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TCRAP04437 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TCRAP04437 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TCRAP04437 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TCRAP04437 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TCRAP04437 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
TCRAP04437 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TCRAP04437 AL139393.2-201ENST00000608721 2025 ntBASIC20.02■□□□□ 0.79
TCRAP04437 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TCRAP04437 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20.01■□□□□ 0.79
TCRAP04437 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TCRAP04437 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
TCRAP04437 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TCRAP04437 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TCRAP04437 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
TCRAP04437 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TCRAP04437 DRD5P2-201ENST00000421395 2012 ntBASIC19.96■□□□□ 0.79
TCRAP04437 AL031258.1-201ENST00000623562 325 ntBASIC19.95■□□□□ 0.78
TCRAP04437 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms