Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
GAPDHP04406 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
GAPDHP04406 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
GAPDHP04406 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC22.1■■□□□ 1.13
GAPDHP04406 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
GAPDHP04406 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC22.1■■□□□ 1.13
GAPDHP04406 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
GAPDHP04406 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
GAPDHP04406 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
GAPDHP04406 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC22.07■■□□□ 1.12
GAPDHP04406 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
GAPDHP04406 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
GAPDHP04406 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
GAPDHP04406 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC22.05■■□□□ 1.12
GAPDHP04406 AL133380.1-201ENST00000506013 324 ntBASIC22.05■■□□□ 1.12
GAPDHP04406 SETD8P1-201ENST00000623146 1180 ntBASIC22.05■■□□□ 1.12
GAPDHP04406 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC22.05■■□□□ 1.12
GAPDHP04406 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
GAPDHP04406 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
GAPDHP04406 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC22.04■■□□□ 1.12
GAPDHP04406 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
GAPDHP04406 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
GAPDHP04406 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
GAPDHP04406 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
GAPDHP04406 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
GAPDHP04406 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
GAPDHP04406 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
GAPDHP04406 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
GAPDHP04406 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
GAPDHP04406 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
GAPDHP04406 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
GAPDHP04406 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
GAPDHP04406 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
GAPDHP04406 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
GAPDHP04406 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
GAPDHP04406 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
GAPDHP04406 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
GAPDHP04406 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.97■■□□□ 1.11
GAPDHP04406 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
GAPDHP04406 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
GAPDHP04406 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.95■■□□□ 1.11
GAPDHP04406 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
GAPDHP04406 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
GAPDHP04406 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
GAPDHP04406 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
GAPDHP04406 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
GAPDHP04406 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
GAPDHP04406 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.93■■□□□ 1.1
GAPDHP04406 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
GAPDHP04406 WASH5P-204ENST00000632292 975 ntBASIC21.92■■□□□ 1.1
GAPDHP04406 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
GAPDHP04406 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
GAPDHP04406 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.92■■□□□ 1.1
GAPDHP04406 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
GAPDHP04406 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
GAPDHP04406 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.91■■□□□ 1.1
GAPDHP04406 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.91■■□□□ 1.1
GAPDHP04406 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.9■■□□□ 1.1
GAPDHP04406 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
GAPDHP04406 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
GAPDHP04406 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
GAPDHP04406 AC142086.6-201ENST00000621154 1765 ntBASIC21.89■■□□□ 1.1
GAPDHP04406 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
GAPDHP04406 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
GAPDHP04406 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21.89■■□□□ 1.09
GAPDHP04406 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
GAPDHP04406 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
GAPDHP04406 AC097358.2-201ENST00000607541 1159 ntBASIC21.88■■□□□ 1.09
GAPDHP04406 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.88■■□□□ 1.09
GAPDHP04406 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.88■■□□□ 1.09
GAPDHP04406 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
GAPDHP04406 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
GAPDHP04406 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC21.87■■□□□ 1.09
GAPDHP04406 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
GAPDHP04406 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
GAPDHP04406 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
GAPDHP04406 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
GAPDHP04406 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
GAPDHP04406 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
GAPDHP04406 ST7-AS1-201ENST00000456775 1889 ntBASIC21.85■■□□□ 1.09
GAPDHP04406 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
GAPDHP04406 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
GAPDHP04406 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
GAPDHP04406 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
GAPDHP04406 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
GAPDHP04406 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
GAPDHP04406 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
GAPDHP04406 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
GAPDHP04406 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.82■■□□□ 1.08
GAPDHP04406 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
GAPDHP04406 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
GAPDHP04406 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
GAPDHP04406 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
GAPDHP04406 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
GAPDHP04406 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
GAPDHP04406 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
GAPDHP04406 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
GAPDHP04406 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC21.81■■□□□ 1.08
GAPDHP04406 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
GAPDHP04406 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms