Protein–RNA interactions for Protein: P00403

MT-CO2, Cytochrome c oxidase subunit 2, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO2P00403 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC21.28■■□□□ 1
MT-CO2P00403 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
MT-CO2P00403 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
MT-CO2P00403 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.26■□□□□ 0.99
MT-CO2P00403 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
MT-CO2P00403 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC21.25■□□□□ 0.99
MT-CO2P00403 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC21.24■□□□□ 0.99
MT-CO2P00403 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
MT-CO2P00403 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
MT-CO2P00403 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
MT-CO2P00403 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
MT-CO2P00403 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
MT-CO2P00403 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC21.22■□□□□ 0.99
MT-CO2P00403 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC21.22■□□□□ 0.99
MT-CO2P00403 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MT-CO2P00403 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
MT-CO2P00403 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.21■□□□□ 0.99
MT-CO2P00403 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
MT-CO2P00403 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
MT-CO2P00403 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
MT-CO2P00403 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MT-CO2P00403 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MT-CO2P00403 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
MT-CO2P00403 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MT-CO2P00403 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC21.17■□□□□ 0.98
MT-CO2P00403 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MT-CO2P00403 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MT-CO2P00403 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MT-CO2P00403 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
MT-CO2P00403 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC21.14■□□□□ 0.97
MT-CO2P00403 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MT-CO2P00403 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MT-CO2P00403 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MT-CO2P00403 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.11■□□□□ 0.97
MT-CO2P00403 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MT-CO2P00403 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
MT-CO2P00403 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MT-CO2P00403 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MT-CO2P00403 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MT-CO2P00403 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MT-CO2P00403 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
MT-CO2P00403 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MT-CO2P00403 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
MT-CO2P00403 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
MT-CO2P00403 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC21.08■□□□□ 0.97
MT-CO2P00403 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
MT-CO2P00403 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
MT-CO2P00403 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MT-CO2P00403 AC139426.1-201ENST00000568218 2529 ntBASIC21.07■□□□□ 0.96
MT-CO2P00403 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC21.07■□□□□ 0.96
MT-CO2P00403 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MT-CO2P00403 KLF16-203ENST00000592313 508 ntTSL 3 BASIC21.06■□□□□ 0.96
MT-CO2P00403 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
MT-CO2P00403 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MT-CO2P00403 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
MT-CO2P00403 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
MT-CO2P00403 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MT-CO2P00403 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
MT-CO2P00403 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MT-CO2P00403 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
MT-CO2P00403 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
MT-CO2P00403 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
MT-CO2P00403 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
MT-CO2P00403 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
MT-CO2P00403 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MT-CO2P00403 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
MT-CO2P00403 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
MT-CO2P00403 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MT-CO2P00403 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MT-CO2P00403 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC21.02■□□□□ 0.96
MT-CO2P00403 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.02■□□□□ 0.96
MT-CO2P00403 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
MT-CO2P00403 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MT-CO2P00403 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MT-CO2P00403 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC21■□□□□ 0.95
MT-CO2P00403 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21■□□□□ 0.95
MT-CO2P00403 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
MT-CO2P00403 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MT-CO2P00403 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.98■□□□□ 0.95
MT-CO2P00403 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MT-CO2P00403 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MT-CO2P00403 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MT-CO2P00403 ST7-AS1-201ENST00000456775 1889 ntBASIC20.97■□□□□ 0.95
MT-CO2P00403 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MT-CO2P00403 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.97■□□□□ 0.95
MT-CO2P00403 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
MT-CO2P00403 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MT-CO2P00403 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
MT-CO2P00403 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MT-CO2P00403 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MT-CO2P00403 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.95■□□□□ 0.94
MT-CO2P00403 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MT-CO2P00403 AL133380.1-201ENST00000506013 324 ntBASIC20.95■□□□□ 0.94
MT-CO2P00403 WASH5P-204ENST00000632292 975 ntBASIC20.95■□□□□ 0.94
MT-CO2P00403 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MT-CO2P00403 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MT-CO2P00403 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MT-CO2P00403 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MT-CO2P00403 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
MT-CO2P00403 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms