Protein–RNA interactions for Protein: A6NHR8

FAM47DP, Putative protein FAM47D, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM47DPA6NHR8 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
FAM47DPA6NHR8 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
FAM47DPA6NHR8 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
FAM47DPA6NHR8 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
FAM47DPA6NHR8 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
FAM47DPA6NHR8 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC27.59■■■□□ 2.01
FAM47DPA6NHR8 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
FAM47DPA6NHR8 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC27.59■■■□□ 2.01
FAM47DPA6NHR8 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC27.58■■■□□ 2
FAM47DPA6NHR8 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
FAM47DPA6NHR8 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC27.56■■■□□ 2
FAM47DPA6NHR8 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC27.56■■■□□ 2
FAM47DPA6NHR8 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC27.56■■■□□ 2
FAM47DPA6NHR8 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC27.55■■■□□ 2
FAM47DPA6NHR8 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC27.55■■■□□ 2
FAM47DPA6NHR8 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
FAM47DPA6NHR8 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
FAM47DPA6NHR8 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
FAM47DPA6NHR8 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
FAM47DPA6NHR8 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC27.51■■□□□ 1.99
FAM47DPA6NHR8 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
FAM47DPA6NHR8 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC27.49■■□□□ 1.99
FAM47DPA6NHR8 SHF-206ENST00000560471 2499 ntTSL 5 BASIC27.48■■□□□ 1.99
FAM47DPA6NHR8 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
FAM47DPA6NHR8 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
FAM47DPA6NHR8 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC27.48■■□□□ 1.99
FAM47DPA6NHR8 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC27.48■■□□□ 1.99
FAM47DPA6NHR8 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC27.48■■□□□ 1.99
FAM47DPA6NHR8 MIR3665-201ENST00000578708 105 ntBASIC27.48■■□□□ 1.99
FAM47DPA6NHR8 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
FAM47DPA6NHR8 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
FAM47DPA6NHR8 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
FAM47DPA6NHR8 MIR762-201ENST00000390236 83 ntBASIC27.45■■□□□ 1.98
FAM47DPA6NHR8 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC27.45■■□□□ 1.98
FAM47DPA6NHR8 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC27.45■■□□□ 1.98
FAM47DPA6NHR8 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
FAM47DPA6NHR8 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC27.44■■□□□ 1.98
FAM47DPA6NHR8 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
FAM47DPA6NHR8 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC27.43■■□□□ 1.98
FAM47DPA6NHR8 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
FAM47DPA6NHR8 CHML-205ENST00000638160 705 ntTSL 3 BASIC27.43■■□□□ 1.98
FAM47DPA6NHR8 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
FAM47DPA6NHR8 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
FAM47DPA6NHR8 DUX4L28-201ENST00000623687 678 ntBASIC27.4■■□□□ 1.98
FAM47DPA6NHR8 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.98
FAM47DPA6NHR8 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC27.39■■□□□ 1.98
FAM47DPA6NHR8 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
FAM47DPA6NHR8 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
FAM47DPA6NHR8 AC005559.1-201ENST00000589661 871 ntBASIC27.38■■□□□ 1.97
FAM47DPA6NHR8 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
FAM47DPA6NHR8 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
FAM47DPA6NHR8 WASH5P-204ENST00000632292 975 ntBASIC27.37■■□□□ 1.97
FAM47DPA6NHR8 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
FAM47DPA6NHR8 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
FAM47DPA6NHR8 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC27.36■■□□□ 1.97
FAM47DPA6NHR8 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC27.35■■□□□ 1.97
FAM47DPA6NHR8 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC27.35■■□□□ 1.97
FAM47DPA6NHR8 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
FAM47DPA6NHR8 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
FAM47DPA6NHR8 AC139426.1-201ENST00000568218 2529 ntBASIC27.34■■□□□ 1.97
FAM47DPA6NHR8 AC087741.3-201ENST00000624270 1347 ntBASIC27.34■■□□□ 1.97
FAM47DPA6NHR8 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
FAM47DPA6NHR8 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
FAM47DPA6NHR8 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
FAM47DPA6NHR8 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
FAM47DPA6NHR8 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
FAM47DPA6NHR8 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC27.31■■□□□ 1.96
FAM47DPA6NHR8 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
FAM47DPA6NHR8 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
FAM47DPA6NHR8 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
FAM47DPA6NHR8 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC27.3■■□□□ 1.96
FAM47DPA6NHR8 DENR-202ENST00000455982 1052 ntTSL 5 BASIC27.3■■□□□ 1.96
FAM47DPA6NHR8 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC27.29■■□□□ 1.96
FAM47DPA6NHR8 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
FAM47DPA6NHR8 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC27.27■■□□□ 1.96
FAM47DPA6NHR8 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
FAM47DPA6NHR8 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC27.27■■□□□ 1.96
FAM47DPA6NHR8 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
FAM47DPA6NHR8 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
FAM47DPA6NHR8 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
FAM47DPA6NHR8 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
FAM47DPA6NHR8 AC044849.2-201ENST00000606596 710 ntBASIC27.25■■□□□ 1.95
FAM47DPA6NHR8 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
FAM47DPA6NHR8 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
FAM47DPA6NHR8 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
FAM47DPA6NHR8 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
FAM47DPA6NHR8 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
FAM47DPA6NHR8 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
FAM47DPA6NHR8 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.94
FAM47DPA6NHR8 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC27.18■■□□□ 1.94
FAM47DPA6NHR8 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
FAM47DPA6NHR8 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
FAM47DPA6NHR8 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
FAM47DPA6NHR8 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
FAM47DPA6NHR8 ABHD17AP4-201ENST00000411545 909 ntBASIC27.17■■□□□ 1.94
FAM47DPA6NHR8 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
FAM47DPA6NHR8 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
FAM47DPA6NHR8 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
FAM47DPA6NHR8 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
FAM47DPA6NHR8 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC27.16■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms