Protein–RNA interactions for Protein: A0A0U1RRK4

LOC107984640, Uncharacterized protein, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC107984640A0A0U1RRK4 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
LOC107984640A0A0U1RRK4 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
LOC107984640A0A0U1RRK4 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LOC107984640A0A0U1RRK4 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC17.42■□□□□ 0.38
LOC107984640A0A0U1RRK4 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LOC107984640A0A0U1RRK4 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LOC107984640A0A0U1RRK4 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
LOC107984640A0A0U1RRK4 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LOC107984640A0A0U1RRK4 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC17.41■□□□□ 0.38
LOC107984640A0A0U1RRK4 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LOC107984640A0A0U1RRK4 SETD8P1-201ENST00000623146 1180 ntBASIC17.4■□□□□ 0.38
LOC107984640A0A0U1RRK4 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
LOC107984640A0A0U1RRK4 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LOC107984640A0A0U1RRK4 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
LOC107984640A0A0U1RRK4 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LOC107984640A0A0U1RRK4 WASH5P-204ENST00000632292 975 ntBASIC17.39■□□□□ 0.37
LOC107984640A0A0U1RRK4 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LOC107984640A0A0U1RRK4 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC17.38■□□□□ 0.37
LOC107984640A0A0U1RRK4 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LOC107984640A0A0U1RRK4 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LOC107984640A0A0U1RRK4 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LOC107984640A0A0U1RRK4 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LOC107984640A0A0U1RRK4 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LOC107984640A0A0U1RRK4 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
LOC107984640A0A0U1RRK4 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LOC107984640A0A0U1RRK4 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
LOC107984640A0A0U1RRK4 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC17.36■□□□□ 0.37
LOC107984640A0A0U1RRK4 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LOC107984640A0A0U1RRK4 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
LOC107984640A0A0U1RRK4 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LOC107984640A0A0U1RRK4 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LOC107984640A0A0U1RRK4 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LOC107984640A0A0U1RRK4 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LOC107984640A0A0U1RRK4 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LOC107984640A0A0U1RRK4 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LOC107984640A0A0U1RRK4 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LOC107984640A0A0U1RRK4 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LOC107984640A0A0U1RRK4 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LOC107984640A0A0U1RRK4 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LOC107984640A0A0U1RRK4 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LOC107984640A0A0U1RRK4 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LOC107984640A0A0U1RRK4 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LOC107984640A0A0U1RRK4 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LOC107984640A0A0U1RRK4 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LOC107984640A0A0U1RRK4 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LOC107984640A0A0U1RRK4 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC17.3■□□□□ 0.36
LOC107984640A0A0U1RRK4 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LOC107984640A0A0U1RRK4 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LOC107984640A0A0U1RRK4 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
LOC107984640A0A0U1RRK4 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LOC107984640A0A0U1RRK4 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC17.28■□□□□ 0.36
LOC107984640A0A0U1RRK4 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LOC107984640A0A0U1RRK4 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LOC107984640A0A0U1RRK4 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LOC107984640A0A0U1RRK4 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LOC107984640A0A0U1RRK4 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC17.27■□□□□ 0.36
LOC107984640A0A0U1RRK4 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
LOC107984640A0A0U1RRK4 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LOC107984640A0A0U1RRK4 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LOC107984640A0A0U1RRK4 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC17.25■□□□□ 0.35
LOC107984640A0A0U1RRK4 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LOC107984640A0A0U1RRK4 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LOC107984640A0A0U1RRK4 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LOC107984640A0A0U1RRK4 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LOC107984640A0A0U1RRK4 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
LOC107984640A0A0U1RRK4 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LOC107984640A0A0U1RRK4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
LOC107984640A0A0U1RRK4 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
LOC107984640A0A0U1RRK4 AC097358.2-201ENST00000607541 1159 ntBASIC17.23■□□□□ 0.35
LOC107984640A0A0U1RRK4 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LOC107984640A0A0U1RRK4 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LOC107984640A0A0U1RRK4 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LOC107984640A0A0U1RRK4 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC17.22■□□□□ 0.35
LOC107984640A0A0U1RRK4 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LOC107984640A0A0U1RRK4 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LOC107984640A0A0U1RRK4 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LOC107984640A0A0U1RRK4 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LOC107984640A0A0U1RRK4 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LOC107984640A0A0U1RRK4 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
LOC107984640A0A0U1RRK4 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LOC107984640A0A0U1RRK4 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LOC107984640A0A0U1RRK4 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC17.2■□□□□ 0.34
LOC107984640A0A0U1RRK4 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LOC107984640A0A0U1RRK4 EBPL-202ENST00000378268 680 ntTSL 3 BASIC17.19■□□□□ 0.34
LOC107984640A0A0U1RRK4 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
LOC107984640A0A0U1RRK4 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC17.18■□□□□ 0.34
LOC107984640A0A0U1RRK4 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LOC107984640A0A0U1RRK4 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LOC107984640A0A0U1RRK4 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
LOC107984640A0A0U1RRK4 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC17.18■□□□□ 0.34
LOC107984640A0A0U1RRK4 AL391121.1-201ENST00000607967 1349 ntBASIC17.18■□□□□ 0.34
LOC107984640A0A0U1RRK4 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
LOC107984640A0A0U1RRK4 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
LOC107984640A0A0U1RRK4 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
LOC107984640A0A0U1RRK4 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LOC107984640A0A0U1RRK4 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
LOC107984640A0A0U1RRK4 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LOC107984640A0A0U1RRK4 AC136428.2-201ENST00000563187 214 ntBASIC17.16■□□□□ 0.34
LOC107984640A0A0U1RRK4 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LOC107984640A0A0U1RRK4 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms